RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 IQGAP3Q86VI3 1631 aa9.27□□□□□ -0.93
NCK1-208ENST00000482071 VWDEQ8N2E2 1590 aa9.26□□□□□ -0.93
NCK1-208ENST00000482071 SPAG9O60271 1321 aaKnown RBP9.26□□□□□ -0.93
NCK1-208ENST00000482071 ANKRD30BQ9BXX2 1392 aa9.25□□□□□ -0.93
NCK1-208ENST00000482071 HECW2Q9P2P5 1572 aa9.25□□□□□ -0.93
NCK1-208ENST00000482071 FAM98CQ17RN3 349 aaKnown RBP9.25□□□□□ -0.93
NCK1-208ENST00000482071 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
NCK1-208ENST00000482071 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
NCK1-208ENST00000482071 RTN4Q9NQC3 1192 aaKnown RBP9.25□□□□□ -0.93
NCK1-208ENST00000482071 TEX14Q8IWB6 1497 aa9.25□□□□□ -0.93
NCK1-208ENST00000482071 DHX29Q7Z478 1369 aaKnown RBP9.24□□□□□ -0.93
NCK1-208ENST00000482071 FAM69CQ0P6D2 419 aa9.24□□□□□ -0.93
NCK1-208ENST00000482071 E2F4Q16254 413 aa9.24□□□□□ -0.93
NCK1-208ENST00000482071 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
NCK1-208ENST00000482071 MROH1Q8NDA8 1641 aa9.23□□□□□ -0.93
NCK1-208ENST00000482071 RNF17Q9BXT8 1623 aaKnown RBP9.23□□□□□ -0.93
NCK1-208ENST00000482071 ATP10AO60312 1499 aa9.23□□□□□ -0.93
NCK1-208ENST00000482071 MAP3K7O43318 606 aa9.23□□□□□ -0.93
NCK1-208ENST00000482071 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
NCK1-208ENST00000482071 TSPOAP1O95153 1857 aa9.23□□□□□ -0.93
NCK1-208ENST00000482071 ABCA6Q8N139 1617 aa9.23□□□□□ -0.93
NCK1-208ENST00000482071 DIP2CQ9Y2E4 1556 aa9.22□□□□□ -0.93
NCK1-208ENST00000482071 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
NCK1-208ENST00000482071 WBP1LQ9NX94 342 aa9.22□□□□□ -0.93
NCK1-208ENST00000482071 RPRD2Q5VT52 1461 aaKnown RBP9.21□□□□□ -0.93
NCK1-208ENST00000482071 PRDM15P57071 1507 aaPredicted RBP9.21□□□□□ -0.93
NCK1-208ENST00000482071 FAM135AQ9P2D6 1515 aa9.21□□□□□ -0.93
NCK1-208ENST00000482071 A2MP01023 1474 aa9.21□□□□□ -0.94
NCK1-208ENST00000482071 LMTK2Q8IWU2 1503 aa9.21□□□□□ -0.94
NCK1-208ENST00000482071 PAXIP1Q6ZW49 1069 aaPredicted RBP9.2□□□□□ -0.94
NCK1-208ENST00000482071 NUP155O75694 1391 aa9.2□□□□□ -0.94
NCK1-208ENST00000482071 COL17A1Q9UMD9 1497 aaPredicted RBP9.2□□□□□ -0.94
NCK1-208ENST00000482071 TRIM52Q96A61 297 aa9.19□□□□□ -0.94
NCK1-208ENST00000482071 SIN3AQ96ST3 1273 aa9.19□□□□□ -0.94
NCK1-208ENST00000482071 TET3O43151 1660 aa9.19□□□□□ -0.94
NCK1-208ENST00000482071 PPP1R15AO75807 674 aaPredicted RBP9.18□□□□□ -0.94
NCK1-208ENST00000482071 AGLP35573 1532 aa9.18□□□□□ -0.94
NCK1-208ENST00000482071 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
NCK1-208ENST00000482071 LRCH3Q96II8 777 aa9.18□□□□□ -0.94
NCK1-208ENST00000482071 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
NCK1-208ENST00000482071 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.18□□□□□ -0.94
NCK1-208ENST00000482071 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
NCK1-208ENST00000482071 E9PCH4 1651 aa9.17□□□□□ -0.94
NCK1-208ENST00000482071 PLA2R1Q13018 1463 aa9.17□□□□□ -0.94
NCK1-208ENST00000482071 RAPGEF3O95398 923 aa9.17□□□□□ -0.94
NCK1-208ENST00000482071 CERKQ8TCT0 537 aa9.17□□□□□ -0.94
NCK1-208ENST00000482071 CDCA7LQ96GN5 454 aa9.17□□□□□ -0.94
NCK1-208ENST00000482071 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
NCK1-208ENST00000482071 PTPRTO14522 1441 aa9.16□□□□□ -0.94
NCK1-208ENST00000482071 PRSS12P56730 875 aa9.16□□□□□ -0.94
NCK1-208ENST00000482071 WDR70Q9NW82 654 aa9.16□□□□□ -0.94
NCK1-208ENST00000482071 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
NCK1-208ENST00000482071 NEURL4Q96JN8 1562 aa9.16□□□□□ -0.94
NCK1-208ENST00000482071 YEATS2Q9ULM3 1422 aa9.15□□□□□ -0.94
NCK1-208ENST00000482071 OSBPP22059 807 aa9.15□□□□□ -0.94
NCK1-208ENST00000482071 ZC3H13Q5T200 1668 aaKnown RBP9.14□□□□□ -0.95
NCK1-208ENST00000482071 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
NCK1-208ENST00000482071 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
NCK1-208ENST00000482071 SPHKAPQ2M3C7 1700 aa9.14□□□□□ -0.95
NCK1-208ENST00000482071 SIGLEC1Q9BZZ2 1709 aa9.14□□□□□ -0.95
NCK1-208ENST00000482071 KCNC4Q03721 635 aa9.13□□□□□ -0.95
NCK1-208ENST00000482071 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
NCK1-208ENST00000482071 EFCAB6Q5THR3 1501 aa9.13□□□□□ -0.95
NCK1-208ENST00000482071 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
NCK1-208ENST00000482071 ARHGAP31Q2M1Z3 1444 aa9.13□□□□□ -0.95
NCK1-208ENST00000482071 TRPM2O94759 1503 aa9.12□□□□□ -0.95
NCK1-208ENST00000482071 CEP152O94986 1710 aa9.12□□□□□ -0.95
NCK1-208ENST00000482071 SMAPO00193 183 aa9.12□□□□□ -0.95
NCK1-208ENST00000482071 KIF3BO15066 747 aa9.12□□□□□ -0.95
NCK1-208ENST00000482071 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
NCK1-208ENST00000482071 RBM27Q9P2N5 1060 aaKnown RBP9.12□□□□□ -0.95
NCK1-208ENST00000482071 ABCC3O15438 1527 aa9.11□□□□□ -0.95
NCK1-208ENST00000482071 SAMD7Q7Z3H4 446 aa9.11□□□□□ -0.95
NCK1-208ENST00000482071 UHRF1BP1Q6BDS2 1440 aa9.11□□□□□ -0.95
NCK1-208ENST00000482071 KANK1Q14678 1352 aa9.11□□□□□ -0.95
NCK1-208ENST00000482071 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
NCK1-208ENST00000482071 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
NCK1-208ENST00000482071 TATDN2Q93075 761 aa9.1□□□□□ -0.95
NCK1-208ENST00000482071 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
NCK1-208ENST00000482071 CAMSAP1Q5T5Y3 1602 aa9.09□□□□□ -0.95
NCK1-208ENST00000482071 TTC13Q8NBP0 860 aa9.09□□□□□ -0.95
NCK1-208ENST00000482071 L3MBTL2Q969R5 705 aa9.09□□□□□ -0.95
NCK1-208ENST00000482071 NOS1P29475 1434 aa9.08□□□□□ -0.96
NCK1-208ENST00000482071 SPATA31E1Q6ZUB1 1445 aa9.08□□□□□ -0.96
NCK1-208ENST00000482071 PPP4CP60510 307 aa9.08□□□□□ -0.96
NCK1-208ENST00000482071 NPDC1Q9NQX5 325 aaPredicted RBP9.08□□□□□ -0.96
NCK1-208ENST00000482071 PNMA3Q9UL41 463 aa9.08□□□□□ -0.96
NCK1-208ENST00000482071 PIK3C2BO00750 1634 aa9.08□□□□□ -0.96
NCK1-208ENST00000482071 CLTCL1P53675 1640 aa9.08□□□□□ -0.96
NCK1-208ENST00000482071 NPATQ14207 1427 aa9.07□□□□□ -0.96
NCK1-208ENST00000482071 IFT172Q9UG01 1749 aa9.06□□□□□ -0.96
NCK1-208ENST00000482071 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
NCK1-208ENST00000482071 CCDC144AA2RUR9 1427 aa9.05□□□□□ -0.96
NCK1-208ENST00000482071 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
NCK1-208ENST00000482071 KIF1BO60333 1816 aa9.05□□□□□ -0.96
NCK1-208ENST00000482071 NUDT18Q6ZVK8 323 aa9.05□□□□□ -0.96
NCK1-208ENST00000482071 PREX1Q8TCU6 1659 aa9.04□□□□□ -0.96
NCK1-208ENST00000482071 NBPF8Q3BBV2 869 aa9.04□□□□□ -0.96
NCK1-208ENST00000482071 MROH2AA6NES4 1674 aa9.04□□□□□ -0.96
NCK1-208ENST00000482071 SYNMO15061 1565 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms