RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 RASSF7Q02833 373 aa6.97□□□□□ -1.29
KDM1A-204ENST00000481879 KCNH2Q12809 1159 aa6.97□□□□□ -1.29
KDM1A-204ENST00000481879 PRR7Q8TB68 274 aa6.97□□□□□ -1.29
KDM1A-204ENST00000481879 ZC3H15Q8WU90 426 aaKnown RBP6.97□□□□□ -1.29
KDM1A-204ENST00000481879 UNC93B1Q9H1C4 597 aa6.97□□□□□ -1.29
KDM1A-204ENST00000481879 SPDYE5A6NIY4 337 aa6.96□□□□□ -1.3
KDM1A-204ENST00000481879 MTMR2Q13614 643 aa6.96□□□□□ -1.3
KDM1A-204ENST00000481879 GIGYF2Q6Y7W6 1299 aaKnown RBP6.96□□□□□ -1.3
KDM1A-204ENST00000481879 BAP1Q92560 729 aa6.96□□□□□ -1.3
KDM1A-204ENST00000481879 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
KDM1A-204ENST00000481879 CAPN5O15484 640 aaPredicted RBP6.95□□□□□ -1.3
KDM1A-204ENST00000481879 DESI1Q6ICB0 168 aa6.95□□□□□ -1.3
KDM1A-204ENST00000481879 BEGAINQ9BUH8 593 aa6.95□□□□□ -1.3
KDM1A-204ENST00000481879 GJA5P36382 358 aa6.94□□□□□ -1.3
KDM1A-204ENST00000481879 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
KDM1A-204ENST00000481879 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
KDM1A-204ENST00000481879 TBC1D2Q9BYX2 928 aa6.94□□□□□ -1.3
KDM1A-204ENST00000481879 VARSP26640 1264 aaKnown RBP6.93□□□□□ -1.3
KDM1A-204ENST00000481879 ZNF511Q8NB15 262 aa6.93□□□□□ -1.3
KDM1A-204ENST00000481879 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
KDM1A-204ENST00000481879 PLEKHG3A1L390 1219 aa6.92□□□□□ -1.3
KDM1A-204ENST00000481879 TRIM46Q7Z4K8 759 aa6.92□□□□□ -1.3
KDM1A-204ENST00000481879 MPNDQ8N594 471 aa6.92□□□□□ -1.3
KDM1A-204ENST00000481879 BMP1P13497 986 aa6.91□□□□□ -1.3
KDM1A-204ENST00000481879 CTHP32929 405 aa6.91□□□□□ -1.3
KDM1A-204ENST00000481879 RSBN1LQ6PCB5 846 aaPredicted RBP6.91□□□□□ -1.3
KDM1A-204ENST00000481879 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
KDM1A-204ENST00000481879 PCDHB15Q9Y5E8 787 aa6.91□□□□□ -1.3
KDM1A-204ENST00000481879 SPTLC1O15269 473 aa6.9□□□□□ -1.3
KDM1A-204ENST00000481879 PARP9Q8IXQ6 854 aa6.9□□□□□ -1.3
KDM1A-204ENST00000481879 PSMG3-AS1Q96PY0 264 aa6.9□□□□□ -1.3
KDM1A-204ENST00000481879 TLL2Q9Y6L7 1015 aa6.9□□□□□ -1.3
KDM1A-204ENST00000481879 TRIM66O15016 1216 aa6.89□□□□□ -1.31
KDM1A-204ENST00000481879 HRCP23327 699 aa6.89□□□□□ -1.31
KDM1A-204ENST00000481879 ZBTB3Q9H5J0 574 aa6.89□□□□□ -1.31
KDM1A-204ENST00000481879 CFAP99D6REC4 459 aa6.88□□□□□ -1.31
KDM1A-204ENST00000481879 NNTQ13423 1086 aa6.88□□□□□ -1.31
KDM1A-204ENST00000481879 GPAT2Q6NUI2 795 aa6.88□□□□□ -1.31
KDM1A-204ENST00000481879 RIC3Q7Z5B4 369 aa6.88□□□□□ -1.31
KDM1A-204ENST00000481879 FAM174AQ8TBP5 190 aa6.88□□□□□ -1.31
KDM1A-204ENST00000481879 AK7Q96M32 723 aa6.88□□□□□ -1.31
KDM1A-204ENST00000481879 RNF225M0QZC1 329 aaPredicted RBP6.87□□□□□ -1.31
KDM1A-204ENST00000481879 IGHA1P01876 353 aa6.87□□□□□ -1.31
KDM1A-204ENST00000481879 VSIG8P0DPA2 414 aa6.87□□□□□ -1.31
KDM1A-204ENST00000481879 PRPF38BQ5VTL8 546 aaKnown RBP6.87□□□□□ -1.31
KDM1A-204ENST00000481879 ZFP42Q96MM3 310 aa6.87□□□□□ -1.31
KDM1A-204ENST00000481879 KRTAP1-3Q8IUG1 177 aa6.86□□□□□ -1.31
KDM1A-204ENST00000481879 ADH1CP00326 375 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
KDM1A-204ENST00000481879 WDR4P57081 412 aaKnown RBP6.85□□□□□ -1.31
KDM1A-204ENST00000481879 SCARF1Q14162 830 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 CSPP1Q1MSJ5 1256 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 MRPL14Q6P1L8 145 aaKnown RBP6.85□□□□□ -1.31
KDM1A-204ENST00000481879 CABLES1Q8TDN4 633 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 FOXJ1Q92949 421 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 CDK15Q96Q40 435 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 MAP10Q9P2G4 905 aa6.85□□□□□ -1.31
KDM1A-204ENST00000481879 TIMP2P16035 220 aa6.84□□□□□ -1.31
KDM1A-204ENST00000481879 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
KDM1A-204ENST00000481879 NUTM2BA6NNL0 878 aaPredicted RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 NUTM2EB1AL46 878 aaPredicted RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 AGERQ15109 404 aa6.83□□□□□ -1.32
KDM1A-204ENST00000481879 NUTM2DQ5VT03 806 aaPredicted RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 NUTM2AQ8IVF1 878 aaPredicted RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 KLF16Q9BXK1 252 aaPredicted RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 DNMT3AQ9Y6K1 912 aaPredicted RBP6.83□□□□□ -1.32
KDM1A-204ENST00000481879 PER1O15534 1290 aaPredicted RBP6.82□□□□□ -1.32
KDM1A-204ENST00000481879 NR5A1Q13285 461 aa6.82□□□□□ -1.32
KDM1A-204ENST00000481879 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
KDM1A-204ENST00000481879 TSC1Q92574 1164 aa6.82□□□□□ -1.32
KDM1A-204ENST00000481879 ADAMTS8Q9UP79 889 aa6.82□□□□□ -1.32
KDM1A-204ENST00000481879 PDE4DQ08499 809 aa6.81□□□□□ -1.32
KDM1A-204ENST00000481879 TUSC1Q2TAM9 212 aa6.81□□□□□ -1.32
KDM1A-204ENST00000481879 MYSM1Q5VVJ2 828 aa6.81□□□□□ -1.32
KDM1A-204ENST00000481879 ARMC2Q8NEN0 867 aa6.81□□□□□ -1.32
KDM1A-204ENST00000481879 LIMD1Q9UGP4 676 aa6.81□□□□□ -1.32
KDM1A-204ENST00000481879 LILRB3O75022 631 aa6.8□□□□□ -1.32
KDM1A-204ENST00000481879 ZIC2O95409 532 aaPredicted RBP6.8□□□□□ -1.32
KDM1A-204ENST00000481879 GRM5P41594 1212 aa6.8□□□□□ -1.32
KDM1A-204ENST00000481879 QPCTQ16769 361 aa6.8□□□□□ -1.32
KDM1A-204ENST00000481879 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
KDM1A-204ENST00000481879 ADAM23O75077 832 aa6.79□□□□□ -1.32
KDM1A-204ENST00000481879 ITPKCQ96DU7 683 aa6.79□□□□□ -1.32
KDM1A-204ENST00000481879 ZFAND3Q9H8U3 227 aa6.79□□□□□ -1.32
KDM1A-204ENST00000481879 SOBPA7XYQ1 873 aa6.78□□□□□ -1.32
KDM1A-204ENST00000481879 NR3C2P08235 984 aa6.78□□□□□ -1.32
KDM1A-204ENST00000481879 FOXK2Q01167 660 aa6.78□□□□□ -1.32
KDM1A-204ENST00000481879 RTL5Q5HYW3 569 aaPredicted RBP6.77□□□□□ -1.33
KDM1A-204ENST00000481879 C6orf118Q5T5N4 469 aa6.77□□□□□ -1.33
KDM1A-204ENST00000481879 HELBQ8NG08 1087 aaPredicted RBP6.77□□□□□ -1.33
KDM1A-204ENST00000481879 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
KDM1A-204ENST00000481879 MAN1A2O60476 641 aa6.76□□□□□ -1.33
KDM1A-204ENST00000481879 UPP2O95045 317 aa6.76□□□□□ -1.33
KDM1A-204ENST00000481879 NBPF14Q5TI25 921 aa6.76□□□□□ -1.33
KDM1A-204ENST00000481879 SH3RF1Q7Z6J0 888 aa6.76□□□□□ -1.33
KDM1A-204ENST00000481879 C1QTNF2Q9BXJ5 285 aa6.76□□□□□ -1.33
KDM1A-204ENST00000481879 BMP2P12643 396 aa6.75□□□□□ -1.33
KDM1A-204ENST00000481879 CLK2P49760 499 aaKnown RBP6.75□□□□□ -1.33
KDM1A-204ENST00000481879 VASH1Q7L8A9 365 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms