RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
COPA-204ENST00000481522 FURINP09958 794 aa9.13□□□□□ -0.95
COPA-204ENST00000481522 NNTQ13423 1086 aa9.13□□□□□ -0.95
COPA-204ENST00000481522 LYPD4Q6UWN0 246 aa9.13□□□□□ -0.95
COPA-204ENST00000481522 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
COPA-204ENST00000481522 KDM2AQ9Y2K7 1162 aa9.13□□□□□ -0.95
COPA-204ENST00000481522 METTL3Q86U44 580 aaKnown RBP9.12□□□□□ -0.95
COPA-204ENST00000481522 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
COPA-204ENST00000481522 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
COPA-204ENST00000481522 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
COPA-204ENST00000481522 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
COPA-204ENST00000481522 ADH1CP00326 375 aa9.1□□□□□ -0.95
COPA-204ENST00000481522 CNTNAP5Q8WYK1 1306 aa9.08□□□□□ -0.96
COPA-204ENST00000481522 ITGB7P26010 798 aa9.08□□□□□ -0.96
COPA-204ENST00000481522 GCGRP47871 477 aa9.08□□□□□ -0.96
COPA-204ENST00000481522 HIC1Q14526 733 aa9.08□□□□□ -0.96
COPA-204ENST00000481522 C6orf118Q5T5N4 469 aa9.08□□□□□ -0.96
COPA-204ENST00000481522 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
COPA-204ENST00000481522 PHF20L1A8MW92 1017 aa9.07□□□□□ -0.96
COPA-204ENST00000481522 SOS2Q07890 1332 aaPredicted RBP9.06□□□□□ -0.96
COPA-204ENST00000481522 DDX11L8A8MPP1 907 aa9.06□□□□□ -0.96
COPA-204ENST00000481522 SH3BP2P78314 561 aa9.05□□□□□ -0.96
COPA-204ENST00000481522 USB1Q9BQ65 265 aaKnown RBP9.05□□□□□ -0.96
COPA-204ENST00000481522 GOLGA2P5Q9HBQ8 144 aa9.05□□□□□ -0.96
COPA-204ENST00000481522 ADAMTS2O95450 1211 aa9.04□□□□□ -0.96
COPA-204ENST00000481522 Q3C1V9 767 aa9.04□□□□□ -0.96
COPA-204ENST00000481522 SEMA3EO15041 775 aa9.03□□□□□ -0.96
COPA-204ENST00000481522 CELA2BP08218 269 aaPredicted RBP9.03□□□□□ -0.96
COPA-204ENST00000481522 PTCRAQ6ISU1 281 aaPredicted RBP9.03□□□□□ -0.96
COPA-204ENST00000481522 MAP3K10Q02779 954 aa9.02□□□□□ -0.97
COPA-204ENST00000481522 PTSQ03393 145 aa9.02□□□□□ -0.97
COPA-204ENST00000481522 SULF1Q8IWU6 871 aa9.02□□□□□ -0.97
COPA-204ENST00000481522 MPNDQ8N594 471 aa9.02□□□□□ -0.97
COPA-204ENST00000481522 ZFAND3Q9H8U3 227 aa9.01□□□□□ -0.97
COPA-204ENST00000481522 GNPATO15228 680 aa9□□□□□ -0.97
COPA-204ENST00000481522 GRIPAP1Q4V328 841 aa8.99□□□□□ -0.97
COPA-204ENST00000481522 KRTAP4-9Q9BYQ8 210 aa8.99□□□□□ -0.97
COPA-204ENST00000481522 NLRP7Q8WX94 980 aa8.98□□□□□ -0.97
COPA-204ENST00000481522 PLEKHG3A1L390 1219 aa8.97□□□□□ -0.97
COPA-204ENST00000481522 KRBA1A5PL33 1030 aa8.97□□□□□ -0.97
COPA-204ENST00000481522 BMP2P12643 396 aa8.97□□□□□ -0.97
COPA-204ENST00000481522 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
COPA-204ENST00000481522 CCDC155Q8N6L0 562 aa8.97□□□□□ -0.97
COPA-204ENST00000481522 KRTAP4-2Q9BYR5 136 aa8.97□□□□□ -0.97
COPA-204ENST00000481522 RBM26Q5T8P6 1007 aaKnown RBP8.96□□□□□ -0.98
COPA-204ENST00000481522 BEND7Q8N7W2 519 aaPredicted RBP8.96□□□□□ -0.98
COPA-204ENST00000481522 ZIC2O95409 532 aaPredicted RBP8.95□□□□□ -0.98
COPA-204ENST00000481522 SRSF11Q05519 484 aaKnown RBP8.95□□□□□ -0.98
COPA-204ENST00000481522 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.95□□□□□ -0.98
COPA-204ENST00000481522 VWA5B2Q8N398 1253 aa8.95□□□□□ -0.98
COPA-204ENST00000481522 ITPKCQ96DU7 683 aa8.95□□□□□ -0.98
COPA-204ENST00000481522 SMYD5Q6GMV2 418 aa8.94□□□□□ -0.98
COPA-204ENST00000481522 MEIOBQ8N635 442 aa8.93□□□□□ -0.98
COPA-204ENST00000481522 ENAMQ9NRM1 1142 aa8.93□□□□□ -0.98
COPA-204ENST00000481522 TESPA1A2RU30 521 aaPredicted RBP8.92□□□□□ -0.98
COPA-204ENST00000481522 GPR37O15354 613 aa8.92□□□□□ -0.98
COPA-204ENST00000481522 JUNDP17535 347 aa8.92□□□□□ -0.98
COPA-204ENST00000481522 PHOX2BQ99453 314 aa8.92□□□□□ -0.98
COPA-204ENST00000481522 SLC35F4A4IF30 521 aa8.91□□□□□ -0.98
COPA-204ENST00000481522 ZMYM1Q5SVZ6 1142 aa8.91□□□□□ -0.98
COPA-204ENST00000481522 SV2AQ7L0J3 742 aa8.91□□□□□ -0.98
COPA-204ENST00000481522 PODNQ7Z5L7 613 aa8.91□□□□□ -0.98
COPA-204ENST00000481522 ITGA6P23229 1130 aa8.9□□□□□ -0.98
COPA-204ENST00000481522 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
COPA-204ENST00000481522 CDC14CA4D256 554 aa8.89□□□□□ -0.99
COPA-204ENST00000481522 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
COPA-204ENST00000481522 VARSP26640 1264 aaKnown RBP8.89□□□□□ -0.99
COPA-204ENST00000481522 SH3RF1Q7Z6J0 888 aa8.89□□□□□ -0.99
COPA-204ENST00000481522 GAS6Q14393 721 aa8.88□□□□□ -0.99
COPA-204ENST00000481522 UPP2O95045 317 aa8.87□□□□□ -0.99
COPA-204ENST00000481522 NR3C2P08235 984 aa8.86□□□□□ -0.99
COPA-204ENST00000481522 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
COPA-204ENST00000481522 TTLL8A6PVC2 850 aa8.85□□□□□ -0.99
COPA-204ENST00000481522 KDM4AO75164 1064 aa8.85□□□□□ -0.99
COPA-204ENST00000481522 CD46P15529 392 aa8.85□□□□□ -0.99
COPA-204ENST00000481522 FOXD4L6Q3SYB3 417 aaPredicted RBP8.85□□□□□ -0.99
COPA-204ENST00000481522 FOXD4L3Q6VB84 417 aaPredicted RBP8.85□□□□□ -0.99
COPA-204ENST00000481522 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
COPA-204ENST00000481522 USP46P62068 366 aa8.83□□□□□ -1
COPA-204ENST00000481522 HLA-CQ95604 372 aa8.83□□□□□ -1
COPA-204ENST00000481522 BAP1Q92560 729 aa8.82□□□□□ -1
COPA-204ENST00000481522 CDK15Q96Q40 435 aa8.82□□□□□ -1
COPA-204ENST00000481522 ZNF511Q8NB15 262 aa8.81□□□□□ -1
COPA-204ENST00000481522 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
COPA-204ENST00000481522 GPIHBP1Q8IV16 184 aa8.8□□□□□ -1
COPA-204ENST00000481522 NEDD1Q8NHV4 660 aa8.8□□□□□ -1
COPA-204ENST00000481522 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
COPA-204ENST00000481522 COL8A1P27658 744 aa8.79□□□□□ -1
COPA-204ENST00000481522 BCANQ96GW7 911 aa8.79□□□□□ -1
COPA-204ENST00000481522 SEMA6BQ9H3T3 888 aa8.79□□□□□ -1
COPA-204ENST00000481522 BCRP11274 1271 aa8.78□□□□□ -1
COPA-204ENST00000481522 HOXA2O43364 376 aa8.77□□□□□ -1.01
COPA-204ENST00000481522 TSEN34Q9BSV6 310 aaKnown RBP8.77□□□□□ -1.01
COPA-204ENST00000481522 SCO2A0A1W2PP80 73 aa8.76□□□□□ -1.01
COPA-204ENST00000481522 CCNYL3P0C7X3 344 aa8.76□□□□□ -1.01
COPA-204ENST00000481522 NR5A1Q13285 461 aa8.76□□□□□ -1.01
COPA-204ENST00000481522 ALYREFQ86V81 257 aaKnown RBP8.76□□□□□ -1.01
COPA-204ENST00000481522 GRM5P41594 1212 aa8.74□□□□□ -1.01
COPA-204ENST00000481522 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
COPA-204ENST00000481522 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms