RNA–Protein interactions for RNA: ENST00000481515.1

SIMC1-207, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 3

Gene SIMC1, Length 896 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-207ENST00000481515 NEFMP07197 916 aa11.47□□□□□ -0.57
SIMC1-207ENST00000481515 PPP4R2Q9NY27 417 aa11.47□□□□□ -0.57
SIMC1-207ENST00000481515 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
SIMC1-207ENST00000481515 CD163L1Q9NR16 1453 aa11.46□□□□□ -0.57
SIMC1-207ENST00000481515 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
SIMC1-207ENST00000481515 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
SIMC1-207ENST00000481515 COG3Q96JB2 828 aa11.46□□□□□ -0.57
SIMC1-207ENST00000481515 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.57
SIMC1-207ENST00000481515 RCAN3Q9UKA8 241 aa11.46□□□□□ -0.57
SIMC1-207ENST00000481515 SETD1BQ9UPS6 1966 aaKnown RBP11.45□□□□□ -0.58
SIMC1-207ENST00000481515 RNF123Q5XPI4 1314 aa11.45□□□□□ -0.58
SIMC1-207ENST00000481515 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.45□□□□□ -0.58
SIMC1-207ENST00000481515 ANKRD26Q9UPS8 1709 aa11.44□□□□□ -0.58
SIMC1-207ENST00000481515 ZNF142P52746 1687 aaPredicted RBP11.44□□□□□ -0.58
SIMC1-207ENST00000481515 E9PSI1 815 aa11.44□□□□□ -0.58
SIMC1-207ENST00000481515 APAF1O14727 1248 aa11.44□□□□□ -0.58
SIMC1-207ENST00000481515 DIAPH1O60610 1272 aaKnown RBP11.44□□□□□ -0.58
SIMC1-207ENST00000481515 ABCB7O75027 752 aa11.44□□□□□ -0.58
SIMC1-207ENST00000481515 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
SIMC1-207ENST00000481515 CDC42BPGQ6DT37 1551 aa11.44□□□□□ -0.58
SIMC1-207ENST00000481515 U2AF1L5P0DN76 240 aaPredicted RBP11.43□□□□□ -0.58
SIMC1-207ENST00000481515 U2AF1Q01081 240 aaKnown RBP eCLIP11.43□□□□□ -0.58
SIMC1-207ENST00000481515 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
SIMC1-207ENST00000481515 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
SIMC1-207ENST00000481515 AATKQ6ZMQ8 1374 aa11.42□□□□□ -0.58
SIMC1-207ENST00000481515 TTC21AQ8NDW8 1320 aa11.42□□□□□ -0.58
SIMC1-207ENST00000481515 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
SIMC1-207ENST00000481515 CCDC146Q8IYE0 955 aa11.42□□□□□ -0.58
SIMC1-207ENST00000481515 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
SIMC1-207ENST00000481515 ANKARQ7Z5J8 1434 aa11.42□□□□□ -0.58
SIMC1-207ENST00000481515 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
SIMC1-207ENST00000481515 ZNF521Q96K83 1311 aa11.41□□□□□ -0.58
SIMC1-207ENST00000481515 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
SIMC1-207ENST00000481515 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
SIMC1-207ENST00000481515 ACEP12821 1306 aa11.4□□□□□ -0.58
SIMC1-207ENST00000481515 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
SIMC1-207ENST00000481515 RRP1P56182 461 aaKnown RBP11.4□□□□□ -0.58
SIMC1-207ENST00000481515 SLFN5Q08AF3 891 aa11.4□□□□□ -0.58
SIMC1-207ENST00000481515 NGDNQ8NEJ9 315 aaKnown RBP11.4□□□□□ -0.58
SIMC1-207ENST00000481515 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
SIMC1-207ENST00000481515 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
SIMC1-207ENST00000481515 FCHSD2O94868 740 aa11.39□□□□□ -0.59
SIMC1-207ENST00000481515 ITSN1Q15811 1721 aa11.39□□□□□ -0.59
SIMC1-207ENST00000481515 XRN1Q8IZH2 1706 aaKnown RBP11.39□□□□□ -0.59
SIMC1-207ENST00000481515 TCP11L2Q8N4U5 519 aa11.39□□□□□ -0.59
SIMC1-207ENST00000481515 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
SIMC1-207ENST00000481515 PRR36Q9H6K5 1346 aa11.38□□□□□ -0.59
SIMC1-207ENST00000481515 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
SIMC1-207ENST00000481515 KCNA6P17658 529 aa11.38□□□□□ -0.59
SIMC1-207ENST00000481515 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
SIMC1-207ENST00000481515 TRMT2AQ8IZ69 625 aaKnown RBP11.38□□□□□ -0.59
SIMC1-207ENST00000481515 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
SIMC1-207ENST00000481515 MON2Q7Z3U7 1717 aa11.38□□□□□ -0.59
SIMC1-207ENST00000481515 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
SIMC1-207ENST00000481515 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
SIMC1-207ENST00000481515 IRX6P78412 446 aaPredicted RBP11.37□□□□□ -0.59
SIMC1-207ENST00000481515 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
SIMC1-207ENST00000481515 DUSP27Q5VZP5 1158 aa11.37□□□□□ -0.59
SIMC1-207ENST00000481515 NME9Q86XW9 330 aa11.37□□□□□ -0.59
SIMC1-207ENST00000481515 POLKQ9UBT6 870 aa11.37□□□□□ -0.59
SIMC1-207ENST00000481515 SHPRHQ149N8 1683 aa11.36□□□□□ -0.59
SIMC1-207ENST00000481515 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
SIMC1-207ENST00000481515 USP6P35125 1406 aa11.36□□□□□ -0.59
SIMC1-207ENST00000481515 PPM1GO15355 546 aaPredicted RBP11.36□□□□□ -0.59
SIMC1-207ENST00000481515 NKTRP30414 1462 aaKnown RBP11.36□□□□□ -0.59
SIMC1-207ENST00000481515 CT47B1P0C2W7 299 aaPredicted RBP11.35□□□□□ -0.59
SIMC1-207ENST00000481515 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
SIMC1-207ENST00000481515 CCDC136Q96JN2 1154 aa11.35□□□□□ -0.59
SIMC1-207ENST00000481515 CDK12Q9NYV4 1490 aaPredicted RBP11.35□□□□□ -0.59
SIMC1-207ENST00000481515 TOPAZ1Q8N9V7 1692 aa11.35□□□□□ -0.59
SIMC1-207ENST00000481515 IL16Q14005 1332 aa11.35□□□□□ -0.59
SIMC1-207ENST00000481515 COL3A1P02461 1466 aaPredicted RBP11.34□□□□□ -0.59
SIMC1-207ENST00000481515 LMOD3Q0VAK6 560 aa11.34□□□□□ -0.59
SIMC1-207ENST00000481515 NUTM2FA1L443 756 aa11.33□□□□□ -0.6
SIMC1-207ENST00000481515 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
SIMC1-207ENST00000481515 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
SIMC1-207ENST00000481515 CHD2O14647 1828 aaKnown RBP11.32□□□□□ -0.6
SIMC1-207ENST00000481515 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 USP31Q70CQ4 1352 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 TMPOP42166 694 aaKnown RBP11.32□□□□□ -0.6
SIMC1-207ENST00000481515 POLA2Q14181 598 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 ADGRL3Q9HAR2 1447 aa11.32□□□□□ -0.6
SIMC1-207ENST00000481515 KIF24Q5T7B8 1368 aa11.31□□□□□ -0.6
SIMC1-207ENST00000481515 MS4A1P11836 297 aa11.31□□□□□ -0.6
SIMC1-207ENST00000481515 IL13P35225 146 aa11.31□□□□□ -0.6
SIMC1-207ENST00000481515 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
SIMC1-207ENST00000481515 FMN2Q9NZ56 1722 aa11.3□□□□□ -0.6
SIMC1-207ENST00000481515 OVOS2A0A0J9YW53 1432 aa11.3□□□□□ -0.6
SIMC1-207ENST00000481515 OVOS2Q6IE36 1432 aa11.3□□□□□ -0.6
SIMC1-207ENST00000481515 RIPK4P57078 832 aa11.3□□□□□ -0.6
SIMC1-207ENST00000481515 AAMPQ13685 434 aa11.3□□□□□ -0.6
SIMC1-207ENST00000481515 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
SIMC1-207ENST00000481515 RRP7AQ9Y3A4 280 aaKnown RBP11.3□□□□□ -0.6
SIMC1-207ENST00000481515 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
SIMC1-207ENST00000481515 NCOA3Q9Y6Q9 1424 aa11.29□□□□□ -0.6
SIMC1-207ENST00000481515 CANXP27824 592 aaKnown RBP11.29□□□□□ -0.6
SIMC1-207ENST00000481515 PSME1Q06323 249 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms