RNA–Protein interactions for RNA: ENST00000481461.1

PLOD3-214, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-214ENST00000481461 BTG4Q9NY30 223 aa27.14■■□□□ 1.94
PLOD3-214ENST00000481461 NBPF1Q3BBV0 1214 aa27.12■■□□□ 1.93
PLOD3-214ENST00000481461 KIAA1210Q9ULL0 1709 aa27.11■■□□□ 1.93
PLOD3-214ENST00000481461 NRAPQ86VF7 1730 aa27.1■■□□□ 1.93
PLOD3-214ENST00000481461 COL14A1Q05707 1796 aaKnown RBP27.09■■□□□ 1.93
PLOD3-214ENST00000481461 ZRANB1Q9UGI0 708 aa27.09■■□□□ 1.93
PLOD3-214ENST00000481461 CRYBG1Q9Y4K1 1723 aa27.07■■□□□ 1.92
PLOD3-214ENST00000481461 FAM98CQ17RN3 349 aaKnown RBP27.07■■□□□ 1.92
PLOD3-214ENST00000481461 NUTM2GQ5VZR2 741 aa27.07■■□□□ 1.92
PLOD3-214ENST00000481461 KRT27Q7Z3Y8 459 aa27.07■■□□□ 1.92
PLOD3-214ENST00000481461 PRDM11Q9NQV5 511 aa27.07■■□□□ 1.92
PLOD3-214ENST00000481461 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
PLOD3-214ENST00000481461 ONECUT3O60422 494 aaPredicted RBP27.06■■□□□ 1.92
PLOD3-214ENST00000481461 SF3B2Q13435 895 aaKnown RBP27.05■■□□□ 1.92
PLOD3-214ENST00000481461 DEFB132Q7Z7B7 95 aa27.04■■□□□ 1.92
PLOD3-214ENST00000481461 CCDC61Q9Y6R9 512 aa27.04■■□□□ 1.92
PLOD3-214ENST00000481461 ACEP12821 1306 aa27.04■■□□□ 1.92
PLOD3-214ENST00000481461 TOPAZ1Q8N9V7 1692 aa27.03■■□□□ 1.92
PLOD3-214ENST00000481461 NBPF8Q3BBV2 869 aa27.02■■□□□ 1.92
PLOD3-214ENST00000481461 KIAA0232Q92628 1395 aa27.01■■□□□ 1.91
PLOD3-214ENST00000481461 SRPK2P78362 688 aaKnown RBP27.01■■□□□ 1.91
PLOD3-214ENST00000481461 CHRNA2Q15822 529 aa27.01■■□□□ 1.91
PLOD3-214ENST00000481461 CENPJQ9HC77 1338 aaPredicted RBP27■■□□□ 1.91
PLOD3-214ENST00000481461 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
PLOD3-214ENST00000481461 PHRF1Q9P1Y6 1649 aaKnown RBP27■■□□□ 1.91
PLOD3-214ENST00000481461 POLR3AO14802 1390 aaPredicted RBP26.99■■□□□ 1.91
PLOD3-214ENST00000481461 SPATA31A5Q5VU36 1347 aa26.98■■□□□ 1.91
PLOD3-214ENST00000481461 SPATA31A7Q8IWB4 1347 aa26.98■■□□□ 1.91
PLOD3-214ENST00000481461 L3MBTL2Q969R5 705 aa26.98■■□□□ 1.91
PLOD3-214ENST00000481461 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
PLOD3-214ENST00000481461 CABP2Q9NPB3 220 aa26.98■■□□□ 1.91
PLOD3-214ENST00000481461 STRN4Q9NRL3 753 aa26.98■■□□□ 1.91
PLOD3-214ENST00000481461 PLEKHG3A1L390 1219 aa26.97■■□□□ 1.91
PLOD3-214ENST00000481461 ABTB2Q8N961 1025 aa26.96■■□□□ 1.91
PLOD3-214ENST00000481461 QRICH2Q9H0J4 1663 aa26.95■■□□□ 1.91
PLOD3-214ENST00000481461 NEUROD1Q13562 356 aa26.95■■□□□ 1.9
PLOD3-214ENST00000481461 FAM182BQ5T319 152 aa26.95■■□□□ 1.9
PLOD3-214ENST00000481461 PPIP5K1Q6PFW1 1433 aa26.95■■□□□ 1.9
PLOD3-214ENST00000481461 SRCAPQ6ZRS2 3230 aa26.94■■□□□ 1.9
PLOD3-214ENST00000481461 USP35Q9P2H5 1018 aa26.91■■□□□ 1.9
PLOD3-214ENST00000481461 EVA1CP58658 441 aa26.9■■□□□ 1.9
PLOD3-214ENST00000481461 SPATA31A1Q5TZJ5 1347 aa26.9■■□□□ 1.9
PLOD3-214ENST00000481461 NRKQ7Z2Y5 1582 aa26.88■■□□□ 1.89
PLOD3-214ENST00000481461 BAG6P46379 1132 aa26.88■■□□□ 1.89
PLOD3-214ENST00000481461 THSD7AQ9UPZ6 1657 aa26.88■■□□□ 1.89
PLOD3-214ENST00000481461 CABP1Q9NZU7 370 aa26.87■■□□□ 1.89
PLOD3-214ENST00000481461 TRPM1Q7Z4N2 1603 aa26.87■■□□□ 1.89
PLOD3-214ENST00000481461 NLRP13Q86W25 1043 aa26.86■■□□□ 1.89
PLOD3-214ENST00000481461 ZBTB7CA1YPR0 619 aa26.85■■□□□ 1.89
PLOD3-214ENST00000481461 USP19O94966 1318 aa26.84■■□□□ 1.89
PLOD3-214ENST00000481461 ROCK2O75116 1388 aaKnown RBP26.84■■□□□ 1.89
PLOD3-214ENST00000481461 CAMTA1Q9Y6Y1 1673 aa26.82■■□□□ 1.88
PLOD3-214ENST00000481461 SSH2Q76I76 1423 aa26.82■■□□□ 1.88
PLOD3-214ENST00000481461 RGPD1P0DJD0 1748 aa26.82■■□□□ 1.88
PLOD3-214ENST00000481461 GCP02774 474 aa26.82■■□□□ 1.88
PLOD3-214ENST00000481461 EN1Q05925 392 aaPredicted RBP26.82■■□□□ 1.88
PLOD3-214ENST00000481461 EVC2Q86UK5 1308 aa26.82■■□□□ 1.88
PLOD3-214ENST00000481461 LARP1Q6PKG0 1096 aaKnown RBP26.81■■□□□ 1.88
PLOD3-214ENST00000481461 NLRP6P59044 892 aa26.8■■□□□ 1.88
PLOD3-214ENST00000481461 CPDO75976 1380 aa26.8■■□□□ 1.88
PLOD3-214ENST00000481461 USP6P35125 1406 aa26.8■■□□□ 1.88
PLOD3-214ENST00000481461 PSDA5PKW4 1024 aaPredicted RBP26.79■■□□□ 1.88
PLOD3-214ENST00000481461 LMO7Q8WWI1 1683 aa26.78■■□□□ 1.88
PLOD3-214ENST00000481461 BRD4O60885 1362 aaPredicted RBP26.76■■□□□ 1.87
PLOD3-214ENST00000481461 TRIM37O94972 964 aa26.76■■□□□ 1.87
PLOD3-214ENST00000481461 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
PLOD3-214ENST00000481461 FAM196AQ6ZSG2 479 aa26.75■■□□□ 1.87
PLOD3-214ENST00000481461 BARGINQ6ZT62 677 aa26.75■■□□□ 1.87
PLOD3-214ENST00000481461 TCP11L2Q8N4U5 519 aa26.75■■□□□ 1.87
PLOD3-214ENST00000481461 TNS1Q9HBL0 1735 aaKnown RBP26.74■■□□□ 1.87
PLOD3-214ENST00000481461 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
PLOD3-214ENST00000481461 PIK3C2AO00443 1686 aa26.71■■□□□ 1.87
PLOD3-214ENST00000481461 EZH2Q15910 746 aaKnown RBP26.71■■□□□ 1.87
PLOD3-214ENST00000481461 SOX12O15370 315 aa26.7■■□□□ 1.86
PLOD3-214ENST00000481461 SLIT3O75094 1523 aa26.69■■□□□ 1.86
PLOD3-214ENST00000481461 APBA3O96018 575 aa26.68■■□□□ 1.86
PLOD3-214ENST00000481461 TTC21BQ7Z4L5 1316 aa26.67■■□□□ 1.86
PLOD3-214ENST00000481461 AKAP12Q02952 1782 aa26.67■■□□□ 1.86
PLOD3-214ENST00000481461 ZNF692Q9BU19 519 aaPredicted RBP26.67■■□□□ 1.86
PLOD3-214ENST00000481461 THRAP3Q9Y2W1 955 aaKnown RBP26.67■■□□□ 1.86
PLOD3-214ENST00000481461 DISP2A7MBM2 1401 aa26.66■■□□□ 1.86
PLOD3-214ENST00000481461 CRB1P82279 1406 aa26.66■■□□□ 1.86
PLOD3-214ENST00000481461 R3HDM1Q15032 1099 aaKnown RBP26.66■■□□□ 1.86
PLOD3-214ENST00000481461 AATKQ6ZMQ8 1374 aa26.66■■□□□ 1.86
PLOD3-214ENST00000481461 CARD11Q9BXL7 1154 aa26.65■■□□□ 1.86
PLOD3-214ENST00000481461 TOM1L2Q6ZVM7 507 aa26.64■■□□□ 1.86
PLOD3-214ENST00000481461 CAMKK2Q96RR4 588 aa26.63■■□□□ 1.85
PLOD3-214ENST00000481461 PARP4Q9UKK3 1724 aaKnown RBP26.62■■□□□ 1.85
PLOD3-214ENST00000481461 KTN1Q86UP2 1357 aaKnown RBP26.62■■□□□ 1.85
PLOD3-214ENST00000481461 AXIN2Q9Y2T1 843 aa26.62■■□□□ 1.85
PLOD3-214ENST00000481461 LRP5O75197 1615 aa26.61■■□□□ 1.85
PLOD3-214ENST00000481461 COL18A1P39060 1754 aa26.61■■□□□ 1.85
PLOD3-214ENST00000481461 TONSLQ96HA7 1378 aa26.61■■□□□ 1.85
PLOD3-214ENST00000481461 KCNH5Q8NCM2 988 aa26.6■■□□□ 1.85
PLOD3-214ENST00000481461 RGPD5Q99666 1765 aa26.6■■□□□ 1.85
PLOD3-214ENST00000481461 TTC21AQ8NDW8 1320 aa26.6■■□□□ 1.85
PLOD3-214ENST00000481461 CPSF1Q10570 1443 aaKnown RBP26.59■■□□□ 1.85
PLOD3-214ENST00000481461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.59■■□□□ 1.85
PLOD3-214ENST00000481461 ARHGEF25Q86VW2 580 aa26.58■■□□□ 1.85
PLOD3-214ENST00000481461 TMC1Q8TDI8 760 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms