RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 GMPR2Q9P2T1 348 aaKnown RBP8.11□□□□□ -1.11
CBX3-207ENST00000481300 ALDH1A1P00352 501 aa8.1□□□□□ -1.11
CBX3-207ENST00000481300 QPCTQ16769 361 aa8.1□□□□□ -1.11
CBX3-207ENST00000481300 KDM4CQ9H3R0 1056 aa8.09□□□□□ -1.11
CBX3-207ENST00000481300 PER1O15534 1290 aaPredicted RBP8.08□□□□□ -1.12
CBX3-207ENST00000481300 LILRB3O75022 631 aa8.08□□□□□ -1.12
CBX3-207ENST00000481300 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
CBX3-207ENST00000481300 TUSC1Q2TAM9 212 aa8.08□□□□□ -1.12
CBX3-207ENST00000481300 ZNF511Q8NB15 262 aa8.08□□□□□ -1.12
CBX3-207ENST00000481300 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
CBX3-207ENST00000481300 CTHP32929 405 aa8.07□□□□□ -1.12
CBX3-207ENST00000481300 ATP13A2Q9NQ11 1180 aa8.07□□□□□ -1.12
CBX3-207ENST00000481300 C11orf95C9JLR9 678 aaPredicted RBP8.06□□□□□ -1.12
CBX3-207ENST00000481300 CLK2P49760 499 aaKnown RBP8.05□□□□□ -1.12
CBX3-207ENST00000481300 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
CBX3-207ENST00000481300 TLL2Q9Y6L7 1015 aa8.05□□□□□ -1.12
CBX3-207ENST00000481300 NUTM2BA6NNL0 878 aaPredicted RBP8.04□□□□□ -1.12
CBX3-207ENST00000481300 NUTM2EB1AL46 878 aaPredicted RBP8.04□□□□□ -1.12
CBX3-207ENST00000481300 NUTM2DQ5VT03 806 aaPredicted RBP8.04□□□□□ -1.12
CBX3-207ENST00000481300 NUTM2AQ8IVF1 878 aaPredicted RBP8.04□□□□□ -1.12
CBX3-207ENST00000481300 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
CBX3-207ENST00000481300 VARSP26640 1264 aaKnown RBP8.03□□□□□ -1.12
CBX3-207ENST00000481300 IL27Q8NEV9 243 aa8.03□□□□□ -1.12
CBX3-207ENST00000481300 TSC1Q92574 1164 aa8.03□□□□□ -1.12
CBX3-207ENST00000481300 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
CBX3-207ENST00000481300 WASF2Q9Y6W5 498 aa8.03□□□□□ -1.12
CBX3-207ENST00000481300 SNRPBP14678 240 aaKnown RBP8.02□□□□□ -1.13
CBX3-207ENST00000481300 LCE2AQ5TA79 106 aaPredicted RBP8.02□□□□□ -1.13
CBX3-207ENST00000481300 DDRGK1Q96HY6 314 aa8.02□□□□□ -1.13
CBX3-207ENST00000481300 RSPH6AQ9H0K4 717 aa8.02□□□□□ -1.13
CBX3-207ENST00000481300 MPNDQ8N594 471 aa8.01□□□□□ -1.13
CBX3-207ENST00000481300 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
CBX3-207ENST00000481300 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
CBX3-207ENST00000481300 FBXO31Q5XUX0 539 aaPredicted RBP8□□□□□ -1.13
CBX3-207ENST00000481300 CAPN5O15484 640 aaPredicted RBP7.99□□□□□ -1.13
CBX3-207ENST00000481300 BMP1P13497 986 aa7.99□□□□□ -1.13
CBX3-207ENST00000481300 TREML4Q6UXN2 200 aa7.99□□□□□ -1.13
CBX3-207ENST00000481300 TRIM46Q7Z4K8 759 aa7.99□□□□□ -1.13
CBX3-207ENST00000481300 HELBQ8NG08 1087 aaPredicted RBP7.99□□□□□ -1.13
CBX3-207ENST00000481300 FAM117AQ9C073 453 aa7.99□□□□□ -1.13
CBX3-207ENST00000481300 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
CBX3-207ENST00000481300 PLEKHG3A1L390 1219 aa7.98□□□□□ -1.13
CBX3-207ENST00000481300 NNTQ13423 1086 aa7.98□□□□□ -1.13
CBX3-207ENST00000481300 FAM174AQ8TBP5 190 aa7.98□□□□□ -1.13
CBX3-207ENST00000481300 SKIV2LQ15477 1246 aaKnown RBP7.97□□□□□ -1.13
CBX3-207ENST00000481300 SH3D19Q5HYK7 790 aa7.97□□□□□ -1.13
CBX3-207ENST00000481300 PROCA1Q8NCQ7 364 aaPredicted RBP7.97□□□□□ -1.13
CBX3-207ENST00000481300 CDK15Q96Q40 435 aa7.97□□□□□ -1.13
CBX3-207ENST00000481300 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
CBX3-207ENST00000481300 ADH1CP00326 375 aa7.96□□□□□ -1.14
CBX3-207ENST00000481300 CTDSPL2Q05D32 466 aa7.96□□□□□ -1.14
CBX3-207ENST00000481300 NFX1Q12986 1120 aaKnown RBP7.96□□□□□ -1.14
CBX3-207ENST00000481300 KIFC2Q96AC6 838 aa7.96□□□□□ -1.14
CBX3-207ENST00000481300 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.96□□□□□ -1.14
CBX3-207ENST00000481300 TIMP2P16035 220 aa7.95□□□□□ -1.14
CBX3-207ENST00000481300 AGERQ15109 404 aa7.95□□□□□ -1.14
CBX3-207ENST00000481300 SH3RF1Q7Z6J0 888 aa7.95□□□□□ -1.14
CBX3-207ENST00000481300 BPHLQ86WA6 291 aaPredicted RBP7.95□□□□□ -1.14
CBX3-207ENST00000481300 KLF16Q9BXK1 252 aaPredicted RBP7.95□□□□□ -1.14
CBX3-207ENST00000481300 ARID5BQ14865 1188 aa7.94□□□□□ -1.14
CBX3-207ENST00000481300 SH3BP5LQ7L8J4 393 aa7.94□□□□□ -1.14
CBX3-207ENST00000481300 ARMC2Q8NEN0 867 aa7.94□□□□□ -1.14
CBX3-207ENST00000481300 C1QTNF2Q9BXJ5 285 aa7.94□□□□□ -1.14
CBX3-207ENST00000481300 WFS1O76024 890 aa7.93□□□□□ -1.14
CBX3-207ENST00000481300 NR3C2P08235 984 aa7.93□□□□□ -1.14
CBX3-207ENST00000481300 GRM5P41594 1212 aa7.93□□□□□ -1.14
CBX3-207ENST00000481300 WDR4P57081 412 aaKnown RBP7.93□□□□□ -1.14
CBX3-207ENST00000481300 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
CBX3-207ENST00000481300 NBPF14Q5TI25 921 aa7.93□□□□□ -1.14
CBX3-207ENST00000481300 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
CBX3-207ENST00000481300 PPP2R2DQ66LE6 453 aa7.92□□□□□ -1.14
CBX3-207ENST00000481300 ZFP42Q96MM3 310 aa7.91□□□□□ -1.14
CBX3-207ENST00000481300 TERTO14746 1132 aaKnown RBP7.9□□□□□ -1.14
CBX3-207ENST00000481300 NR5A1Q13285 461 aa7.9□□□□□ -1.14
CBX3-207ENST00000481300 MRPL14Q6P1L8 145 aaKnown RBP7.9□□□□□ -1.14
CBX3-207ENST00000481300 ITPKCQ96DU7 683 aa7.9□□□□□ -1.14
CBX3-207ENST00000481300 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
CBX3-207ENST00000481300 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
CBX3-207ENST00000481300 TRMT44Q8IYL2 757 aaKnown RBP7.89□□□□□ -1.15
CBX3-207ENST00000481300 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.158e-6■■□□□ 13.6
CBX3-207ENST00000481300 ATP1B4Q9UN42 357 aaPredicted RBP7.89□□□□□ -1.15
CBX3-207ENST00000481300 ZIC2O95409 532 aaPredicted RBP7.88□□□□□ -1.15
CBX3-207ENST00000481300 NR6A1Q15406 480 aa7.88□□□□□ -1.15
CBX3-207ENST00000481300 CARD14Q9BXL6 1004 aa7.88□□□□□ -1.15
CBX3-207ENST00000481300 GOPCQ9HD26 462 aa7.88□□□□□ -1.15
CBX3-207ENST00000481300 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
CBX3-207ENST00000481300 MAP4K5Q9Y4K4 846 aa7.88□□□□□ -1.15
CBX3-207ENST00000481300 AP1G2O75843 785 aa7.87□□□□□ -1.15
CBX3-207ENST00000481300 FSHRP23945 695 aa7.87□□□□□ -1.15
CBX3-207ENST00000481300 ERFEQ4G0M1 354 aa7.87□□□□□ -1.15
CBX3-207ENST00000481300 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
CBX3-207ENST00000481300 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
CBX3-207ENST00000481300 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
CBX3-207ENST00000481300 VASH1Q7L8A9 365 aaPredicted RBP7.86□□□□□ -1.15
CBX3-207ENST00000481300 EPS8L1Q8TE68 723 aa7.86□□□□□ -1.15
CBX3-207ENST00000481300 SCARF1Q14162 830 aa7.85□□□□□ -1.15
CBX3-207ENST00000481300 ERICH6Q7L0X2 663 aa7.85□□□□□ -1.15
CBX3-207ENST00000481300 OCSTAMPQ9BR26 566 aa7.85□□□□□ -1.15
CBX3-207ENST00000481300 HMX1Q9NP08 348 aaPredicted RBP7.85□□□□□ -1.15
CBX3-207ENST00000481300 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms