RNA–Protein interactions for RNA: ENST00000481167.5

CHL1-213, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 662 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-213ENST00000481167 TRPM3Q9HCF6 1732 aaPredicted RBP28.82■■■□□ 2.2
CHL1-213ENST00000481167 MEX3CQ5U5Q3 659 aaKnown RBP28.81■■■□□ 2.2
CHL1-213ENST00000481167 ZNF692Q9BU19 519 aaPredicted RBP28.81■■■□□ 2.2
CHL1-213ENST00000481167 C11orf95C9JLR9 678 aaPredicted RBP28.8■■■□□ 2.2
CHL1-213ENST00000481167 TERF2IPQ9NYB0 399 aa28.8■■■□□ 2.2
CHL1-213ENST00000481167 USP6P35125 1406 aa28.79■■■□□ 2.2
CHL1-213ENST00000481167 KTN1Q86UP2 1357 aaKnown RBP28.79■■■□□ 2.2
CHL1-213ENST00000481167 SPATA31A6Q5VVP1 1343 aa28.79■■■□□ 2.2
CHL1-213ENST00000481167 AKAP12Q02952 1782 aa28.78■■■□□ 2.2
CHL1-213ENST00000481167 NINLQ9Y2I6 1382 aa28.78■■■□□ 2.2
CHL1-213ENST00000481167 CPSF1Q10570 1443 aaKnown RBP28.77■■■□□ 2.2
CHL1-213ENST00000481167 NUTM2GQ5VZR2 741 aa28.76■■■□□ 2.19
CHL1-213ENST00000481167 CD163L1Q9NR16 1453 aa28.76■■■□□ 2.19
CHL1-213ENST00000481167 ARHGEF10O15013 1369 aa28.75■■■□□ 2.19
CHL1-213ENST00000481167 A0A1W2PP64 1363 aa28.75■■■□□ 2.19
CHL1-213ENST00000481167 ZNF772Q68DY9 489 aaPredicted RBP28.74■■■□□ 2.19
CHL1-213ENST00000481167 ABTB2Q8N961 1025 aa28.74■■■□□ 2.19
CHL1-213ENST00000481167 ALS2Q96Q42 1657 aa28.74■■■□□ 2.19
CHL1-213ENST00000481167 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
CHL1-213ENST00000481167 CABLES1Q8TDN4 633 aa28.73■■■□□ 2.19
CHL1-213ENST00000481167 TTC21BQ7Z4L5 1316 aa28.72■■■□□ 2.19
CHL1-213ENST00000481167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.72■■■□□ 2.19
CHL1-213ENST00000481167 BRD4O60885 1362 aaPredicted RBP28.72■■■□□ 2.19
CHL1-213ENST00000481167 MON2Q7Z3U7 1717 aa28.72■■■□□ 2.19
CHL1-213ENST00000481167 KIF7Q2M1P5 1343 aa28.71■■■□□ 2.19
CHL1-213ENST00000481167 MYOM1P52179 1685 aa28.71■■■□□ 2.19
CHL1-213ENST00000481167 COL22A1Q8NFW1 1626 aaPredicted RBP28.71■■■□□ 2.19
CHL1-213ENST00000481167 UPF1Q92900 1129 aaKnown RBP eCLIP28.7■■■□□ 2.18
CHL1-213ENST00000481167 ANKRD36BQ8N2N9 1353 aa28.7■■■□□ 2.18
CHL1-213ENST00000481167 ADAMTS2O95450 1211 aa28.69■■■□□ 2.18
CHL1-213ENST00000481167 SSH2Q76I76 1423 aa28.69■■■□□ 2.18
CHL1-213ENST00000481167 TTC21AQ8NDW8 1320 aa28.67■■■□□ 2.18
CHL1-213ENST00000481167 NLRP6P59044 892 aa28.66■■■□□ 2.18
CHL1-213ENST00000481167 EDC4Q6P2E9 1401 aaKnown RBP28.66■■■□□ 2.18
CHL1-213ENST00000481167 NRKQ7Z2Y5 1582 aa28.66■■■□□ 2.18
CHL1-213ENST00000481167 NLRP13Q86W25 1043 aa28.65■■■□□ 2.18
CHL1-213ENST00000481167 CCDC7Q96M83 1385 aa28.63■■■□□ 2.17
CHL1-213ENST00000481167 RXRBP28702 533 aa28.63■■■□□ 2.17
CHL1-213ENST00000481167 NME9Q86XW9 330 aa28.63■■■□□ 2.17
CHL1-213ENST00000481167 WASHC2AQ641Q2 1341 aa28.62■■■□□ 2.17
CHL1-213ENST00000481167 PIK3C2AO00443 1686 aa28.61■■■□□ 2.17
CHL1-213ENST00000481167 C8orf37Q96NL8 207 aa28.6■■■□□ 2.17
CHL1-213ENST00000481167 PANK3Q9H999 370 aa28.6■■■□□ 2.17
CHL1-213ENST00000481167 ZRANB1Q9UGI0 708 aa28.6■■■□□ 2.17
CHL1-213ENST00000481167 ABCA3Q99758 1704 aa28.6■■■□□ 2.17
CHL1-213ENST00000481167 CARD14Q9BXL6 1004 aa28.59■■■□□ 2.17
CHL1-213ENST00000481167 NSD3Q9BZ95 1437 aa28.58■■■□□ 2.17
CHL1-213ENST00000481167 AFF2P51816 1311 aa28.57■■■□□ 2.16
CHL1-213ENST00000481167 NGLY1Q96IV0 654 aa28.56■■■□□ 2.16
CHL1-213ENST00000481167 CDK12Q9NYV4 1490 aaPredicted RBP28.56■■■□□ 2.16
CHL1-213ENST00000481167 CRYBG1Q9Y4K1 1723 aa28.56■■■□□ 2.16
CHL1-213ENST00000481167 PHRF1Q9P1Y6 1649 aaKnown RBP28.55■■■□□ 2.16
CHL1-213ENST00000481167 USP19O94966 1318 aa28.55■■■□□ 2.16
CHL1-213ENST00000481167 SOX12O15370 315 aa28.55■■■□□ 2.16
CHL1-213ENST00000481167 ZC3H6P61129 1189 aaKnown RBP28.53■■■□□ 2.16
CHL1-213ENST00000481167 MARF1Q9Y4F3 1742 aaKnown RBP28.52■■■□□ 2.16
CHL1-213ENST00000481167 ZBTB7CA1YPR0 619 aa28.52■■■□□ 2.16
CHL1-213ENST00000481167 GCP02774 474 aa28.52■■■□□ 2.16
CHL1-213ENST00000481167 GGNBP2Q9H3C7 697 aa28.52■■■□□ 2.16
CHL1-213ENST00000481167 USP31Q70CQ4 1352 aa28.5■■■□□ 2.15
CHL1-213ENST00000481167 FYB1O15117 783 aa28.5■■■□□ 2.15
CHL1-213ENST00000481167 COG3Q96JB2 828 aa28.5■■■□□ 2.15
CHL1-213ENST00000481167 PRDM11Q9NQV5 511 aa28.49■■■□□ 2.15
CHL1-213ENST00000481167 KIAA0232Q92628 1395 aa28.48■■■□□ 2.15
CHL1-213ENST00000481167 SLIT3O75094 1523 aa28.48■■■□□ 2.15
CHL1-213ENST00000481167 CGNL1Q0VF96 1302 aa28.47■■■□□ 2.15
CHL1-213ENST00000481167 RGS12O14924 1447 aa28.47■■■□□ 2.15
CHL1-213ENST00000481167 KCNH5Q8NCM2 988 aa28.47■■■□□ 2.15
CHL1-213ENST00000481167 KIF20BQ96Q89 1820 aa28.47■■■□□ 2.15
CHL1-213ENST00000481167 FAM83GA6ND36 823 aa28.46■■■□□ 2.15
CHL1-213ENST00000481167 CHRNA2Q15822 529 aa28.46■■■□□ 2.15
CHL1-213ENST00000481167 KNSTRNQ9Y448 316 aa28.46■■■□□ 2.15
CHL1-213ENST00000481167 OVOS2A0A0J9YW53 1432 aa28.45■■■□□ 2.15
CHL1-213ENST00000481167 OVOS2Q6IE36 1432 aa28.45■■■□□ 2.15
CHL1-213ENST00000481167 USP21Q9UK80 565 aa28.44■■■□□ 2.14
CHL1-213ENST00000481167 USP54Q70EL1 1684 aa28.43■■■□□ 2.14
CHL1-213ENST00000481167 QTRT2Q9H974 415 aaKnown RBP28.42■■■□□ 2.14
CHL1-213ENST00000481167 RBM6P78332 1123 aaKnown RBP28.41■■■□□ 2.14
CHL1-213ENST00000481167 FNBP4Q8N3X1 1017 aaPredicted RBP28.41■■■□□ 2.14
CHL1-213ENST00000481167 SRCAPQ6ZRS2 3230 aa28.41■■■□□ 2.14
CHL1-213ENST00000481167 COL14A1Q05707 1796 aaKnown RBP28.39■■■□□ 2.14
CHL1-213ENST00000481167 PLCH1Q4KWH8 1693 aa28.39■■■□□ 2.14
CHL1-213ENST00000481167 BTG4Q9NY30 223 aa28.39■■■□□ 2.14
CHL1-213ENST00000481167 CPDO75976 1380 aa28.38■■■□□ 2.13
CHL1-213ENST00000481167 FBLN1P23142 703 aa28.38■■■□□ 2.13
CHL1-213ENST00000481167 NFAT5O94916 1531 aa28.38■■■□□ 2.13
CHL1-213ENST00000481167 CNGB1Q14028 1251 aaPredicted RBP28.37■■■□□ 2.13
CHL1-213ENST00000481167 SLIT2O94813 1529 aa28.37■■■□□ 2.13
CHL1-213ENST00000481167 ARHGEF25Q86VW2 580 aa28.36■■■□□ 2.13
CHL1-213ENST00000481167 PER1O15534 1290 aaPredicted RBP28.35■■■□□ 2.13
CHL1-213ENST00000481167 UNC5CLQ8IV45 518 aa28.35■■■□□ 2.13
CHL1-213ENST00000481167 BCL9LQ86UU0 1499 aa28.34■■■□□ 2.13
CHL1-213ENST00000481167 ZNF316A6NFI3 1004 aaPredicted RBP28.33■■■□□ 2.13
CHL1-213ENST00000481167 DDX10Q13206 875 aaKnown RBP28.33■■■□□ 2.13
CHL1-213ENST00000481167 STRN4Q9NRL3 753 aa28.33■■■□□ 2.13
CHL1-213ENST00000481167 TNNT2P45379 298 aaPredicted RBP28.32■■■□□ 2.12
CHL1-213ENST00000481167 CC2D1BQ5T0F9 858 aaKnown RBP28.32■■■□□ 2.12
CHL1-213ENST00000481167 CCDC9Q9Y3X0 531 aaKnown RBP28.32■■■□□ 2.12
CHL1-213ENST00000481167 NSD2O96028 1365 aa28.32■■■□□ 2.12
CHL1-213ENST00000481167 NWD2Q9ULI1 1742 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms