RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
PRDM1-206ENST00000481163 USP21Q9UK80 565 aa9.42□□□□□ -0.9
PRDM1-206ENST00000481163 TRPM3Q9HCF6 1732 aaPredicted RBP9.42□□□□□ -0.9
PRDM1-206ENST00000481163 TOPAZ1Q8N9V7 1692 aa9.42□□□□□ -0.9
PRDM1-206ENST00000481163 ABTB2Q8N961 1025 aa9.41□□□□□ -0.9
PRDM1-206ENST00000481163 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
PRDM1-206ENST00000481163 COL22A1Q8NFW1 1626 aaPredicted RBP9.41□□□□□ -0.9
PRDM1-206ENST00000481163 SBNO1A3KN83 1393 aa9.4□□□□□ -0.9
PRDM1-206ENST00000481163 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
PRDM1-206ENST00000481163 ARHGEF10O15013 1369 aa9.39□□□□□ -0.91
PRDM1-206ENST00000481163 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
PRDM1-206ENST00000481163 SOX12O15370 315 aa9.39□□□□□ -0.91
PRDM1-206ENST00000481163 RXRBP28702 533 aa9.39□□□□□ -0.91
PRDM1-206ENST00000481163 ZC3H6P61129 1189 aaKnown RBP9.39□□□□□ -0.91
PRDM1-206ENST00000481163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRDM1-206ENST00000481163 TIMELESSQ9UNS1 1208 aa9.39□□□□□ -0.91
PRDM1-206ENST00000481163 CCDC9Q9Y3X0 531 aaKnown RBP9.39□□□□□ -0.91
PRDM1-206ENST00000481163 ABCA3Q99758 1704 aa9.39□□□□□ -0.91
PRDM1-206ENST00000481163 USP47Q96K76 1375 aa9.38□□□□□ -0.91
PRDM1-206ENST00000481163 SLC12A5Q9H2X9 1139 aa9.38□□□□□ -0.91
PRDM1-206ENST00000481163 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
PRDM1-206ENST00000481163 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
PRDM1-206ENST00000481163 SOCS7O14512 581 aa9.37□□□□□ -0.91
PRDM1-206ENST00000481163 NLRP6P59044 892 aa9.37□□□□□ -0.91
PRDM1-206ENST00000481163 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
PRDM1-206ENST00000481163 POLR3AO14802 1390 aaPredicted RBP9.37□□□□□ -0.91
PRDM1-206ENST00000481163 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
PRDM1-206ENST00000481163 PLCH1Q4KWH8 1693 aa9.36□□□□□ -0.91
PRDM1-206ENST00000481163 TMF1P82094 1093 aa9.36□□□□□ -0.91
PRDM1-206ENST00000481163 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
PRDM1-206ENST00000481163 NLRP13Q86W25 1043 aa9.36□□□□□ -0.91
PRDM1-206ENST00000481163 TESK2Q96S53 571 aa9.36□□□□□ -0.91
PRDM1-206ENST00000481163 PRDM11Q9NQV5 511 aa9.36□□□□□ -0.91
PRDM1-206ENST00000481163 TRPC5Q9UL62 973 aaPredicted RBP9.36□□□□□ -0.91
PRDM1-206ENST00000481163 ATAD2Q6PL18 1390 aa9.36□□□□□ -0.91
PRDM1-206ENST00000481163 A0A0G2JS52 829 aa9.35□□□□□ -0.91
PRDM1-206ENST00000481163 MYT1Q01538 1121 aa9.35□□□□□ -0.91
PRDM1-206ENST00000481163 FNBP4Q8N3X1 1017 aaPredicted RBP9.35□□□□□ -0.91
PRDM1-206ENST00000481163 ZNF692Q9BU19 519 aaPredicted RBP9.35□□□□□ -0.91
PRDM1-206ENST00000481163 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
PRDM1-206ENST00000481163 BTG4Q9NY30 223 aa9.35□□□□□ -0.91
PRDM1-206ENST00000481163 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
PRDM1-206ENST00000481163 PHRF1Q9P1Y6 1649 aaKnown RBP9.34□□□□□ -0.91
PRDM1-206ENST00000481163 USP6P35125 1406 aa9.34□□□□□ -0.91
PRDM1-206ENST00000481163 HSPA5P11021 654 aaKnown RBP9.34□□□□□ -0.91
PRDM1-206ENST00000481163 RBM6P78332 1123 aaKnown RBP9.34□□□□□ -0.91
PRDM1-206ENST00000481163 UNC5CLQ8IV45 518 aa9.34□□□□□ -0.91
PRDM1-206ENST00000481163 TERF2IPQ9NYB0 399 aa9.34□□□□□ -0.91
PRDM1-206ENST00000481163 RGPD5Q99666 1765 aa9.34□□□□□ -0.91
PRDM1-206ENST00000481163 SBNO2Q9Y2G9 1366 aa9.34□□□□□ -0.91
PRDM1-206ENST00000481163 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.92
PRDM1-206ENST00000481163 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
PRDM1-206ENST00000481163 EVA1CP58658 441 aa9.33□□□□□ -0.92
PRDM1-206ENST00000481163 EIF4G2P78344 907 aaKnown RBP eCLIP9.33□□□□□ -0.92
PRDM1-206ENST00000481163 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
PRDM1-206ENST00000481163 KIAA0232Q92628 1395 aa9.33□□□□□ -0.92
PRDM1-206ENST00000481163 MON2Q7Z3U7 1717 aa9.33□□□□□ -0.92
PRDM1-206ENST00000481163 BCL9LQ86UU0 1499 aa9.33□□□□□ -0.92
PRDM1-206ENST00000481163 PIK3C2AO00443 1686 aa9.32□□□□□ -0.92
PRDM1-206ENST00000481163 COL14A1Q05707 1796 aaKnown RBP9.32□□□□□ -0.92
PRDM1-206ENST00000481163 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
PRDM1-206ENST00000481163 GCP02774 474 aa9.32□□□□□ -0.92
PRDM1-206ENST00000481163 NME9Q86XW9 330 aa9.32□□□□□ -0.92
PRDM1-206ENST00000481163 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
PRDM1-206ENST00000481163 USP35Q9P2H5 1018 aa9.32□□□□□ -0.92
PRDM1-206ENST00000481163 NWD2Q9ULI1 1742 aa9.31□□□□□ -0.92
PRDM1-206ENST00000481163 BRWD3Q6RI45 1802 aa9.31□□□□□ -0.92
PRDM1-206ENST00000481163 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.31□□□□□ -0.92
PRDM1-206ENST00000481163 A0A1W2PP64 1363 aa9.3□□□□□ -0.92
PRDM1-206ENST00000481163 CDCA8Q53HL2 280 aa9.3□□□□□ -0.92
PRDM1-206ENST00000481163 SLIT2O94813 1529 aa9.3□□□□□ -0.92
PRDM1-206ENST00000481163 ATRNO75882 1429 aa9.3□□□□□ -0.92
PRDM1-206ENST00000481163 CPSF1Q10570 1443 aaKnown RBP9.3□□□□□ -0.92
PRDM1-206ENST00000481163 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
PRDM1-206ENST00000481163 NRKQ7Z2Y5 1582 aa9.29□□□□□ -0.92
PRDM1-206ENST00000481163 CD163L1Q9NR16 1453 aa9.29□□□□□ -0.92
PRDM1-206ENST00000481163 VPS72Q15906 364 aa9.29□□□□□ -0.92
PRDM1-206ENST00000481163 FAM98CQ17RN3 349 aaKnown RBP9.29□□□□□ -0.92
PRDM1-206ENST00000481163 NRAPQ86VF7 1730 aa9.28□□□□□ -0.92
PRDM1-206ENST00000481163 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
PRDM1-206ENST00000481163 LTN1O94822 1766 aa9.28□□□□□ -0.92
PRDM1-206ENST00000481163 FBLN1P23142 703 aa9.28□□□□□ -0.92
PRDM1-206ENST00000481163 PUS7Q96PZ0 661 aaKnown RBP9.28□□□□□ -0.92
PRDM1-206ENST00000481163 RGS12O14924 1447 aa9.28□□□□□ -0.92
PRDM1-206ENST00000481163 GLI3P10071 1580 aa9.28□□□□□ -0.92
PRDM1-206ENST00000481163 USP19O94966 1318 aa9.28□□□□□ -0.92
PRDM1-206ENST00000481163 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
PRDM1-206ENST00000481163 SEPT12Q8IYM1 358 aa9.27□□□□□ -0.93
PRDM1-206ENST00000481163 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
PRDM1-206ENST00000481163 COG3Q96JB2 828 aa9.27□□□□□ -0.93
PRDM1-206ENST00000481163 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
PRDM1-206ENST00000481163 EDC4Q6P2E9 1401 aaKnown RBP9.27□□□□□ -0.93
PRDM1-206ENST00000481163 SSH2Q76I76 1423 aa9.27□□□□□ -0.93
PRDM1-206ENST00000481163 KIF20BQ96Q89 1820 aa9.26□□□□□ -0.93
PRDM1-206ENST00000481163 MYOM1P52179 1685 aa9.26□□□□□ -0.93
PRDM1-206ENST00000481163 CAMTA1Q9Y6Y1 1673 aa9.26□□□□□ -0.93
PRDM1-206ENST00000481163 C11orf95C9JLR9 678 aaPredicted RBP9.26□□□□□ -0.93
PRDM1-206ENST00000481163 CSB-PGBD3P0DP91 1061 aa9.26□□□□□ -0.93
PRDM1-206ENST00000481163 CNGB1Q14028 1251 aaPredicted RBP9.26□□□□□ -0.93
PRDM1-206ENST00000481163 FAM182BQ5T319 152 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms