RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 SKOR1P84550 965 aa12.29□□□□□ -0.44
GTF3C3-211ENST00000481098 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
GTF3C3-211ENST00000481098 ZNF511Q8NB15 262 aa12.29□□□□□ -0.44
GTF3C3-211ENST00000481098 EPS8L1Q8TE68 723 aa12.29□□□□□ -0.44
GTF3C3-211ENST00000481098 FKBPLQ9UIM3 349 aa12.29□□□□□ -0.44
GTF3C3-211ENST00000481098 SH3BP2P78314 561 aa12.28□□□□□ -0.44
GTF3C3-211ENST00000481098 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
GTF3C3-211ENST00000481098 FLIIQ13045 1269 aa12.27□□□□□ -0.45
GTF3C3-211ENST00000481098 BAP1Q92560 729 aa12.27□□□□□ -0.45
GTF3C3-211ENST00000481098 WNT7AO00755 349 aa12.26□□□□□ -0.45
GTF3C3-211ENST00000481098 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
GTF3C3-211ENST00000481098 GDF9O60383 454 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 GPR37L1O60883 481 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PRR20EP86478 221 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PRR20CP86479 221 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PRR20DP86480 221 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PRR20BP86481 221 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PRR20AP86496 221 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PDXDC2PQ6P474 469 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 TRIM67Q6ZTA4 783 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
GTF3C3-211ENST00000481098 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
GTF3C3-211ENST00000481098 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
GTF3C3-211ENST00000481098 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
GTF3C3-211ENST00000481098 NDUFB9Q9Y6M9 179 aa12.23□□□□□ -0.45
GTF3C3-211ENST00000481098 RC3H1Q5TC82 1133 aaKnown RBP12.21□□□□□ -0.45
GTF3C3-211ENST00000481098 BPHLQ86WA6 291 aaPredicted RBP12.2□□□□□ -0.46
GTF3C3-211ENST00000481098 FOXJ1Q92949 421 aa12.19□□□□□ -0.46
GTF3C3-211ENST00000481098 VARSP26640 1264 aaKnown RBP12.18□□□□□ -0.46
GTF3C3-211ENST00000481098 C4orf48Q5BLP8 95 aa12.18□□□□□ -0.46
GTF3C3-211ENST00000481098 MRGPRX2Q96LB1 330 aa12.18□□□□□ -0.46
GTF3C3-211ENST00000481098 C1QTNF2Q9BXJ5 285 aa12.18□□□□□ -0.46
GTF3C3-211ENST00000481098 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
GTF3C3-211ENST00000481098 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
GTF3C3-211ENST00000481098 SIAH2O43255 324 aa12.16□□□□□ -0.46
GTF3C3-211ENST00000481098 FOXC1Q12948 553 aa12.16□□□□□ -0.46
GTF3C3-211ENST00000481098 MPNDQ8N594 471 aa12.16□□□□□ -0.46
GTF3C3-211ENST00000481098 EHBP1Q8NDI1 1231 aa12.16□□□□□ -0.46
GTF3C3-211ENST00000481098 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
GTF3C3-211ENST00000481098 TBC1D2BQ9UPU7 963 aa12.16□□□□□ -0.46
GTF3C3-211ENST00000481098 PTK2Q05397 1052 aa12.15□□□□□ -0.46
GTF3C3-211ENST00000481098 TRMT44Q8IYL2 757 aaKnown RBP12.14□□□□□ -0.47
GTF3C3-211ENST00000481098 ARHGAP9Q9BRR9 750 aa12.14□□□□□ -0.47
GTF3C3-211ENST00000481098 TOR4AQ9NXH8 423 aa12.14□□□□□ -0.47
GTF3C3-211ENST00000481098 TNFRSF10AO00220 468 aa12.13□□□□□ -0.47
GTF3C3-211ENST00000481098 LAPTM4AQ15012 233 aa12.13□□□□□ -0.47
GTF3C3-211ENST00000481098 FAM174AQ8TBP5 190 aa12.13□□□□□ -0.47
GTF3C3-211ENST00000481098 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
GTF3C3-211ENST00000481098 GTF3C3Q9Y5Q9 886 aa12.13□□□□□ -0.47
GTF3C3-211ENST00000481098 AGERQ15109 404 aa12.12□□□□□ -0.47
GTF3C3-211ENST00000481098 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
GTF3C3-211ENST00000481098 ZBBXA8MT70 800 aa12.11□□□□□ -0.47
GTF3C3-211ENST00000481098 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
GTF3C3-211ENST00000481098 IRF5Q13568 498 aa12.11□□□□□ -0.47
GTF3C3-211ENST00000481098 SNIP1Q8TAD8 396 aaKnown RBP12.11□□□□□ -0.47
GTF3C3-211ENST00000481098 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
GTF3C3-211ENST00000481098 FBXO45P0C2W1 286 aa12.1□□□□□ -0.47
GTF3C3-211ENST00000481098 ERFEQ4G0M1 354 aa12.1□□□□□ -0.47
GTF3C3-211ENST00000481098 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
GTF3C3-211ENST00000481098 GFRA3O60609 400 aa12.09□□□□□ -0.47
GTF3C3-211ENST00000481098 UBTFP17480 764 aaKnown RBP12.09□□□□□ -0.47
GTF3C3-211ENST00000481098 CYP4X1Q8N118 509 aa12.09□□□□□ -0.47
GTF3C3-211ENST00000481098 ADAM32Q8TC27 787 aa12.09□□□□□ -0.47
GTF3C3-211ENST00000481098 MAP4K5Q9Y4K4 846 aa12.09□□□□□ -0.47
GTF3C3-211ENST00000481098 MAGEB6P1A0A0J9YX57 407 aa12.08□□□□□ -0.48
GTF3C3-211ENST00000481098 NR1H3Q13133 447 aa12.08□□□□□ -0.48
GTF3C3-211ENST00000481098 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
GTF3C3-211ENST00000481098 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
GTF3C3-211ENST00000481098 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
GTF3C3-211ENST00000481098 TLL2Q9Y6L7 1015 aa12.06□□□□□ -0.48
GTF3C3-211ENST00000481098 TTC24A2A3L6 582 aaPredicted RBP12.05□□□□□ -0.48
GTF3C3-211ENST00000481098 RAD21O60216 631 aa12.05□□□□□ -0.48
GTF3C3-211ENST00000481098 ABL2P42684 1182 aa12.04□□□□□ -0.48
GTF3C3-211ENST00000481098 CDV3Q9UKY7 258 aaKnown RBP12.04□□□□□ -0.48
GTF3C3-211ENST00000481098 SMPD1P17405 629 aa12.03□□□□□ -0.48
GTF3C3-211ENST00000481098 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
GTF3C3-211ENST00000481098 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
GTF3C3-211ENST00000481098 A6NJR5 290 aa12.02□□□□□ -0.49
GTF3C3-211ENST00000481098 J3QL48 77 aa12.02□□□□□ -0.49
GTF3C3-211ENST00000481098 ADH1CP00326 375 aa12.02□□□□□ -0.49
GTF3C3-211ENST00000481098 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
GTF3C3-211ENST00000481098 DGAT1O75907 488 aa12.01□□□□□ -0.49
GTF3C3-211ENST00000481098 GRM5P41594 1212 aa12.01□□□□□ -0.49
GTF3C3-211ENST00000481098 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-211ENST00000481098 ZNF592Q92610 1267 aa12.01□□□□□ -0.49
GTF3C3-211ENST00000481098 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-211ENST00000481098 FNBP4Q8N3X1 1017 aaPredicted RBP12□□□□□ -0.49
GTF3C3-211ENST00000481098 AVPP01185 164 aa11.99□□□□□ -0.49
GTF3C3-211ENST00000481098 NR5A1Q13285 461 aa11.99□□□□□ -0.49
GTF3C3-211ENST00000481098 WWC1Q8IX03 1113 aa11.99□□□□□ -0.49
GTF3C3-211ENST00000481098 CLUAP1Q96AJ1 413 aa11.99□□□□□ -0.49
GTF3C3-211ENST00000481098 NBPF20Q3BBV1 942 aa11.98□□□□□ -0.49
GTF3C3-211ENST00000481098 VASH1Q7L8A9 365 aaPredicted RBP11.98□□□□□ -0.49
GTF3C3-211ENST00000481098 ARID5BQ14865 1188 aa11.97□□□□□ -0.49
GTF3C3-211ENST00000481098 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
GTF3C3-211ENST00000481098 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
GTF3C3-211ENST00000481098 WASF2Q9Y6W5 498 aa11.97□□□□□ -0.49
GTF3C3-211ENST00000481098 FAM187AA6NFU0 413 aa11.96□□□□□ -0.49
GTF3C3-211ENST00000481098 EIF4G2P78344 907 aaKnown RBP eCLIP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms