RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 VSIG8P0DPA2 414 aa11.19□□□□□ -0.62
RGPD6-209ENST00000480894 NDUFV2P19404 249 aa11.19□□□□□ -0.62
RGPD6-209ENST00000480894 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
RGPD6-209ENST00000480894 PRR7Q8TB68 274 aa11.19□□□□□ -0.62
RGPD6-209ENST00000480894 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
RGPD6-209ENST00000480894 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
RGPD6-209ENST00000480894 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
RGPD6-209ENST00000480894 SOBPA7XYQ1 873 aa11.17□□□□□ -0.62
RGPD6-209ENST00000480894 DESI1Q6ICB0 168 aa11.17□□□□□ -0.62
RGPD6-209ENST00000480894 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
RGPD6-209ENST00000480894 SSTR3P32745 418 aaPredicted RBP11.16□□□□□ -0.62
RGPD6-209ENST00000480894 MTMR2Q13614 643 aa11.15□□□□□ -0.62
RGPD6-209ENST00000480894 SPDYE5A6NIY4 337 aa11.14□□□□□ -0.63
RGPD6-209ENST00000480894 FAM174AQ8TBP5 190 aa11.13□□□□□ -0.63
RGPD6-209ENST00000480894 CDK15Q96Q40 435 aa11.12□□□□□ -0.63
RGPD6-209ENST00000480894 ZIC2O95409 532 aaPredicted RBP11.09□□□□□ -0.63
RGPD6-209ENST00000480894 CTHP32929 405 aa11.09□□□□□ -0.63
RGPD6-209ENST00000480894 LYPD8Q6UX82 237 aa11.09□□□□□ -0.63
RGPD6-209ENST00000480894 ZFAND3Q9H8U3 227 aa11.09□□□□□ -0.63
RGPD6-209ENST00000480894 MAN1A2O60476 641 aa11.08□□□□□ -0.64
RGPD6-209ENST00000480894 FOXJ1Q92949 421 aa11.08□□□□□ -0.64
RGPD6-209ENST00000480894 ITPKCQ96DU7 683 aa11.08□□□□□ -0.64
RGPD6-209ENST00000480894 C6orf118Q5T5N4 469 aa11.07□□□□□ -0.64
RGPD6-209ENST00000480894 PPFIA3O75145 1194 aa11.06□□□□□ -0.64
RGPD6-209ENST00000480894 NR3C2P08235 984 aa11.06□□□□□ -0.64
RGPD6-209ENST00000480894 TTLL12Q14166 644 aaPredicted RBP11.06□□□□□ -0.64
RGPD6-209ENST00000480894 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
RGPD6-209ENST00000480894 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
RGPD6-209ENST00000480894 GJA5P36382 358 aa11.05□□□□□ -0.64
RGPD6-209ENST00000480894 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
RGPD6-209ENST00000480894 NR5A1Q13285 461 aa11.05□□□□□ -0.64
RGPD6-209ENST00000480894 MAP10Q9P2G4 905 aa11.05□□□□□ -0.64
RGPD6-209ENST00000480894 CFAP99D6REC4 459 aa11.04□□□□□ -0.64
RGPD6-209ENST00000480894 GSK3AP49840 483 aa11.04□□□□□ -0.64
RGPD6-209ENST00000480894 SUZ12Q15022 739 aaKnown RBP11.04□□□□□ -0.64
RGPD6-209ENST00000480894 GRM5P41594 1212 aa11.03□□□□□ -0.64
RGPD6-209ENST00000480894 AMHR2Q16671 573 aa11.03□□□□□ -0.64
RGPD6-209ENST00000480894 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
RGPD6-209ENST00000480894 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
RGPD6-209ENST00000480894 BMP2P12643 396 aa11.02□□□□□ -0.65
RGPD6-209ENST00000480894 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
RGPD6-209ENST00000480894 GIGYF2Q6Y7W6 1299 aaKnown RBP11.02□□□□□ -0.65
RGPD6-209ENST00000480894 LINC00528Q8N1L1 170 aa11.02□□□□□ -0.65
RGPD6-209ENST00000480894 BEGAINQ9BUH8 593 aa11.02□□□□□ -0.65
RGPD6-209ENST00000480894 MEIOBQ8N635 442 aa11.01□□□□□ -0.65
RGPD6-209ENST00000480894 TBC1D2Q9BYX2 928 aa11.01□□□□□ -0.65
RGPD6-209ENST00000480894 PCDHB15Q9Y5E8 787 aa11.01□□□□□ -0.65
RGPD6-209ENST00000480894 UPP2O95045 317 aa11□□□□□ -0.65
RGPD6-209ENST00000480894 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
RGPD6-209ENST00000480894 KCTD17Q8N5Z5 321 aa11□□□□□ -0.65
RGPD6-209ENST00000480894 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
RGPD6-209ENST00000480894 AGERQ15109 404 aa10.99□□□□□ -0.65
RGPD6-209ENST00000480894 BPHLQ86WA6 291 aaPredicted RBP10.99□□□□□ -0.65
RGPD6-209ENST00000480894 DNMT3LQ9UJW3 386 aa10.99□□□□□ -0.65
RGPD6-209ENST00000480894 SPTLC1O15269 473 aa10.98□□□□□ -0.65
RGPD6-209ENST00000480894 HRCP23327 699 aa10.98□□□□□ -0.65
RGPD6-209ENST00000480894 DIXDC1Q155Q3 683 aa10.98□□□□□ -0.65
RGPD6-209ENST00000480894 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
RGPD6-209ENST00000480894 KRT76Q01546 638 aa10.96□□□□□ -0.65
RGPD6-209ENST00000480894 BARGINQ6ZT62 677 aa10.96□□□□□ -0.65
RGPD6-209ENST00000480894 C1QTNF2Q9BXJ5 285 aa10.95□□□□□ -0.66
RGPD6-209ENST00000480894 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
RGPD6-209ENST00000480894 GPR161Q8N6U8 529 aaKnown RBP10.94□□□□□ -0.66
RGPD6-209ENST00000480894 PER1O15534 1290 aaPredicted RBP10.93□□□□□ -0.66
RGPD6-209ENST00000480894 FSHRP23945 695 aa10.93□□□□□ -0.66
RGPD6-209ENST00000480894 TMEM151AQ8N4L1 468 aa10.93□□□□□ -0.66
RGPD6-209ENST00000480894 CABLES1Q8TDN4 633 aa10.93□□□□□ -0.66
RGPD6-209ENST00000480894 ZMYND10O75800 440 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 RASSF7Q02833 373 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 BCANQ96GW7 911 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 CNTNAP3BQ96NU0 1288 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 TSEN34Q9BSV6 310 aaKnown RBP10.92□□□□□ -0.66
RGPD6-209ENST00000480894 CNTNAP3Q9BZ76 1288 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 MAP4K5Q9Y4K4 846 aa10.92□□□□□ -0.66
RGPD6-209ENST00000480894 GDF11O95390 407 aa10.91□□□□□ -0.66
RGPD6-209ENST00000480894 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.66
RGPD6-209ENST00000480894 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
RGPD6-209ENST00000480894 ADAMTS8Q9UP79 889 aa10.9□□□□□ -0.66
RGPD6-209ENST00000480894 RNF225M0QZC1 329 aaPredicted RBP10.89□□□□□ -0.67
RGPD6-209ENST00000480894 PTSQ03393 145 aa10.89□□□□□ -0.67
RGPD6-209ENST00000480894 PARP9Q8IXQ6 854 aa10.89□□□□□ -0.67
RGPD6-209ENST00000480894 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
RGPD6-209ENST00000480894 ARMC2Q8NEN0 867 aa10.89□□□□□ -0.67
RGPD6-209ENST00000480894 EMILIN1Q9Y6C2 1016 aa10.89□□□□□ -0.67
RGPD6-209ENST00000480894 TTLL8A6PVC2 850 aa10.88□□□□□ -0.67
RGPD6-209ENST00000480894 CSPP1Q1MSJ5 1256 aa10.88□□□□□ -0.67
RGPD6-209ENST00000480894 VASH1Q7L8A9 365 aaPredicted RBP10.88□□□□□ -0.67
RGPD6-209ENST00000480894 NBPF14Q5TI25 921 aa10.87□□□□□ -0.67
RGPD6-209ENST00000480894 SH3BP5LQ7L8J4 393 aa10.87□□□□□ -0.67
RGPD6-209ENST00000480894 CCDC116Q8IYX3 515 aa10.87□□□□□ -0.67
RGPD6-209ENST00000480894 COL25A1Q9BXS0 654 aaPredicted RBP10.87□□□□□ -0.67
RGPD6-209ENST00000480894 NANOS1Q8WY41 292 aaKnown RBP10.86□□□□□ -0.67
RGPD6-209ENST00000480894 TSC1Q92574 1164 aa10.86□□□□□ -0.67
RGPD6-209ENST00000480894 ZNF385CQ66K41 422 aaPredicted RBP10.85□□□□□ -0.67
RGPD6-209ENST00000480894 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
RGPD6-209ENST00000480894 MAGEB6P1A0A0J9YX57 407 aa10.83□□□□□ -0.68
RGPD6-209ENST00000480894 FIGNL2A6NMB9 653 aa10.83□□□□□ -0.68
RGPD6-209ENST00000480894 QPCTQ16769 361 aa10.83□□□□□ -0.68
RGPD6-209ENST00000480894 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms