RNA–Protein interactions for RNA: ENST00000480785.5

HLA-DMA-209, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-209ENST00000480785 NGDNQ8NEJ9 315 aaKnown RBP18.96■□□□□ 0.63
HLA-DMA-209ENST00000480785 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
HLA-DMA-209ENST00000480785 BCL9LQ86UU0 1499 aa18.96■□□□□ 0.63
HLA-DMA-209ENST00000480785 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
HLA-DMA-209ENST00000480785 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
HLA-DMA-209ENST00000480785 TRPC5Q9UL62 973 aaPredicted RBP18.95■□□□□ 0.62
HLA-DMA-209ENST00000480785 EP400Q96L91 3159 aa18.95■□□□□ 0.62
HLA-DMA-209ENST00000480785 ACEP12821 1306 aa18.94■□□□□ 0.62
HLA-DMA-209ENST00000480785 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
HLA-DMA-209ENST00000480785 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.93■□□□□ 0.62
HLA-DMA-209ENST00000480785 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
HLA-DMA-209ENST00000480785 TESK2Q96S53 571 aa18.9■□□□□ 0.62
HLA-DMA-209ENST00000480785 NWD2Q9ULI1 1742 aa18.9■□□□□ 0.62
HLA-DMA-209ENST00000480785 SRCAPQ6ZRS2 3230 aa18.89■□□□□ 0.62
HLA-DMA-209ENST00000480785 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.62
HLA-DMA-209ENST00000480785 MON2Q7Z3U7 1717 aa18.89■□□□□ 0.61
HLA-DMA-209ENST00000480785 PUS7Q96PZ0 661 aaKnown RBP18.89■□□□□ 0.61
HLA-DMA-209ENST00000480785 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
HLA-DMA-209ENST00000480785 SLIT2O94813 1529 aa18.88■□□□□ 0.61
HLA-DMA-209ENST00000480785 NRKQ7Z2Y5 1582 aa18.88■□□□□ 0.61
HLA-DMA-209ENST00000480785 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
HLA-DMA-209ENST00000480785 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
HLA-DMA-209ENST00000480785 GLI3P10071 1580 aa18.87■□□□□ 0.61
HLA-DMA-209ENST00000480785 USP6P35125 1406 aa18.87■□□□□ 0.61
HLA-DMA-209ENST00000480785 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
HLA-DMA-209ENST00000480785 USP47Q96K76 1375 aa18.87■□□□□ 0.61
HLA-DMA-209ENST00000480785 SLC24A1O60721 1099 aa18.86■□□□□ 0.61
HLA-DMA-209ENST00000480785 CPSF1Q10570 1443 aaKnown RBP18.85■□□□□ 0.61
HLA-DMA-209ENST00000480785 LMOD2Q6P5Q4 547 aa18.85■□□□□ 0.61
HLA-DMA-209ENST00000480785 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
HLA-DMA-209ENST00000480785 COL14A1Q05707 1796 aaKnown RBP18.84■□□□□ 0.61
HLA-DMA-209ENST00000480785 GJD4Q96KN9 370 aaPredicted RBP18.84■□□□□ 0.61
HLA-DMA-209ENST00000480785 NRAPQ86VF7 1730 aa18.83■□□□□ 0.61
HLA-DMA-209ENST00000480785 PIK3C2AO00443 1686 aa18.83■□□□□ 0.61
HLA-DMA-209ENST00000480785 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.6
HLA-DMA-209ENST00000480785 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
HLA-DMA-209ENST00000480785 CD163L1Q9NR16 1453 aa18.83■□□□□ 0.6
HLA-DMA-209ENST00000480785 USP54Q70EL1 1684 aa18.82■□□□□ 0.6
HLA-DMA-209ENST00000480785 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
HLA-DMA-209ENST00000480785 USP19O94966 1318 aa18.8■□□□□ 0.6
HLA-DMA-209ENST00000480785 HAP1P54257 671 aaPredicted RBP18.8■□□□□ 0.6
HLA-DMA-209ENST00000480785 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
HLA-DMA-209ENST00000480785 NINLQ9Y2I6 1382 aa18.79■□□□□ 0.6
HLA-DMA-209ENST00000480785 SLIT3O75094 1523 aa18.79■□□□□ 0.6
HLA-DMA-209ENST00000480785 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
HLA-DMA-209ENST00000480785 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 TMF1P82094 1093 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 CCDC125Q86Z20 511 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 MYOM1P52179 1685 aa18.76■□□□□ 0.59
HLA-DMA-209ENST00000480785 NUTM2GQ5VZR2 741 aa18.75■□□□□ 0.59
HLA-DMA-209ENST00000480785 SLC12A5Q9H2X9 1139 aa18.75■□□□□ 0.59
HLA-DMA-209ENST00000480785 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
HLA-DMA-209ENST00000480785 CPDO75976 1380 aa18.74■□□□□ 0.59
HLA-DMA-209ENST00000480785 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
HLA-DMA-209ENST00000480785 BLMP54132 1417 aaPredicted RBP18.73■□□□□ 0.59
HLA-DMA-209ENST00000480785 EDC4Q6P2E9 1401 aaKnown RBP18.73■□□□□ 0.59
HLA-DMA-209ENST00000480785 COL18A1P39060 1754 aa18.73■□□□□ 0.59
HLA-DMA-209ENST00000480785 A0A1W2PP64 1363 aa18.72■□□□□ 0.59
HLA-DMA-209ENST00000480785 VPS72Q15906 364 aa18.72■□□□□ 0.59
HLA-DMA-209ENST00000480785 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
HLA-DMA-209ENST00000480785 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
HLA-DMA-209ENST00000480785 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
HLA-DMA-209ENST00000480785 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
HLA-DMA-209ENST00000480785 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
HLA-DMA-209ENST00000480785 TERF2IPQ9NYB0 399 aa18.71■□□□□ 0.59
HLA-DMA-209ENST00000480785 USP31Q70CQ4 1352 aa18.7■□□□□ 0.58
HLA-DMA-209ENST00000480785 GCP02774 474 aa18.7■□□□□ 0.58
HLA-DMA-209ENST00000480785 NLRP6P59044 892 aa18.7■□□□□ 0.58
HLA-DMA-209ENST00000480785 SEPT12Q8IYM1 358 aa18.7■□□□□ 0.58
HLA-DMA-209ENST00000480785 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
HLA-DMA-209ENST00000480785 RGPD5Q99666 1765 aa18.7■□□□□ 0.58
HLA-DMA-209ENST00000480785 ANKRD36BQ8N2N9 1353 aa18.69■□□□□ 0.58
HLA-DMA-209ENST00000480785 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
HLA-DMA-209ENST00000480785 EIF4G2P78344 907 aaKnown RBP eCLIP18.69■□□□□ 0.58
HLA-DMA-209ENST00000480785 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
HLA-DMA-209ENST00000480785 NFAT5O94916 1531 aa18.68■□□□□ 0.58
HLA-DMA-209ENST00000480785 CAMTA1Q9Y6Y1 1673 aa18.67■□□□□ 0.58
HLA-DMA-209ENST00000480785 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
HLA-DMA-209ENST00000480785 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
HLA-DMA-209ENST00000480785 LTN1O94822 1766 aa18.67■□□□□ 0.58
HLA-DMA-209ENST00000480785 KIF20BQ96Q89 1820 aa18.66■□□□□ 0.58
HLA-DMA-209ENST00000480785 DEFB132Q7Z7B7 95 aa18.65■□□□□ 0.58
HLA-DMA-209ENST00000480785 ABCC6O95255 1503 aa18.64■□□□□ 0.58
HLA-DMA-209ENST00000480785 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
HLA-DMA-209ENST00000480785 KCNH5Q8NCM2 988 aa18.64■□□□□ 0.57
HLA-DMA-209ENST00000480785 AATKQ6ZMQ8 1374 aa18.64■□□□□ 0.57
HLA-DMA-209ENST00000480785 OVOS2A0A0J9YW53 1432 aa18.64■□□□□ 0.57
HLA-DMA-209ENST00000480785 OVOS2Q6IE36 1432 aa18.64■□□□□ 0.57
HLA-DMA-209ENST00000480785 NME9Q86XW9 330 aa18.63■□□□□ 0.57
HLA-DMA-209ENST00000480785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
HLA-DMA-209ENST00000480785 THSD7AQ9UPZ6 1657 aa18.63■□□□□ 0.57
HLA-DMA-209ENST00000480785 KRT27Q7Z3Y8 459 aa18.62■□□□□ 0.57
HLA-DMA-209ENST00000480785 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
HLA-DMA-209ENST00000480785 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
HLA-DMA-209ENST00000480785 SPATA31A5Q5VU36 1347 aa18.62■□□□□ 0.57
HLA-DMA-209ENST00000480785 SPATA31A7Q8IWB4 1347 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms