RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 APBB1O00213 710 aa11.09□□□□□ -0.63
CALD1-219ENST00000480638 ZNF511Q8NB15 262 aa11.09□□□□□ -0.63
CALD1-219ENST00000480638 FKBPLQ9UIM3 349 aa11.09□□□□□ -0.63
CALD1-219ENST00000480638 WNT7BP56706 349 aa11.08□□□□□ -0.64
CALD1-219ENST00000480638 SH3BP2P78314 561 aa11.08□□□□□ -0.64
CALD1-219ENST00000480638 SKOR1P84550 965 aa11.08□□□□□ -0.64
CALD1-219ENST00000480638 FLIIQ13045 1269 aa11.08□□□□□ -0.64
CALD1-219ENST00000480638 NBPF14Q5TI25 921 aa11.08□□□□□ -0.64
CALD1-219ENST00000480638 NDUFB9Q9Y6M9 179 aa11.07□□□□□ -0.64
CALD1-219ENST00000480638 ZC3H4Q9UPT8 1303 aaKnown RBP11.07□□□□□ -0.64
CALD1-219ENST00000480638 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
CALD1-219ENST00000480638 GPKOWQ92917 476 aaPredicted RBP eCLIP11.06□□□□□ -0.64
CALD1-219ENST00000480638 GPR37L1O60883 481 aa11.04□□□□□ -0.64
CALD1-219ENST00000480638 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
CALD1-219ENST00000480638 FOXJ1Q92949 421 aa11.03□□□□□ -0.64
CALD1-219ENST00000480638 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
CALD1-219ENST00000480638 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
CALD1-219ENST00000480638 SH3BP5LQ7L8J4 393 aa11.02□□□□□ -0.65
CALD1-219ENST00000480638 PKD2L1Q9P0L9 805 aa11.02□□□□□ -0.65
CALD1-219ENST00000480638 WNT7AO00755 349 aa11.01□□□□□ -0.65
CALD1-219ENST00000480638 GDF9O60383 454 aa11.01□□□□□ -0.65
CALD1-219ENST00000480638 PDXDC2PQ6P474 469 aa11.01□□□□□ -0.65
CALD1-219ENST00000480638 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
CALD1-219ENST00000480638 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
CALD1-219ENST00000480638 PRM3Q9NNZ6 103 aa11.01□□□□□ -0.65
CALD1-219ENST00000480638 FOXC1Q12948 553 aa11□□□□□ -0.65
CALD1-219ENST00000480638 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
CALD1-219ENST00000480638 BPHLQ86WA6 291 aaPredicted RBP11□□□□□ -0.65
CALD1-219ENST00000480638 UBTFP17480 764 aaKnown RBP10.99□□□□□ -0.65
CALD1-219ENST00000480638 AGERQ15109 404 aa10.99□□□□□ -0.65
CALD1-219ENST00000480638 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
CALD1-219ENST00000480638 MRGPRX2Q96LB1 330 aa10.99□□□□□ -0.65
CALD1-219ENST00000480638 GDPD2Q9HCC8 539 aa10.99□□□□□ -0.65
CALD1-219ENST00000480638 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
CALD1-219ENST00000480638 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 PRR20EP86478 221 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 PRR20CP86479 221 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 PRR20DP86480 221 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 PRR20BP86481 221 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 PRR20AP86496 221 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 POM121Q96HA1 1249 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 OCSTAMPQ9BR26 566 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
CALD1-219ENST00000480638 VARSP26640 1264 aaKnown RBP10.97□□□□□ -0.65
CALD1-219ENST00000480638 PTK2Q05397 1052 aa10.97□□□□□ -0.65
CALD1-219ENST00000480638 ARHGAP9Q9BRR9 750 aa10.97□□□□□ -0.65
CALD1-219ENST00000480638 MAGEB6P1A0A0J9YX57 407 aa10.96□□□□□ -0.65
CALD1-219ENST00000480638 C1QTNF2Q9BXJ5 285 aa10.96□□□□□ -0.65
CALD1-219ENST00000480638 CARD14Q9BXL6 1004 aa10.96□□□□□ -0.65
CALD1-219ENST00000480638 ABL2P42684 1182 aa10.95□□□□□ -0.66
CALD1-219ENST00000480638 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
CALD1-219ENST00000480638 ZBBXA8MT70 800 aa10.94□□□□□ -0.66
CALD1-219ENST00000480638 SIAH2O43255 324 aa10.94□□□□□ -0.66
CALD1-219ENST00000480638 IRF5Q13568 498 aa10.94□□□□□ -0.66
CALD1-219ENST00000480638 RAD21O60216 631 aa10.93□□□□□ -0.66
CALD1-219ENST00000480638 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
CALD1-219ENST00000480638 ERFEQ4G0M1 354 aa10.93□□□□□ -0.66
CALD1-219ENST00000480638 FAM174AQ8TBP5 190 aa10.93□□□□□ -0.66
CALD1-219ENST00000480638 TLL2Q9Y6L7 1015 aa10.93□□□□□ -0.66
CALD1-219ENST00000480638 ZBTB33Q86T24 672 aa10.92□□□□□ -0.66
CALD1-219ENST00000480638 ADAM32Q8TC27 787 aa10.92□□□□□ -0.66
CALD1-219ENST00000480638 CLUAP1Q96AJ1 413 aa10.92□□□□□ -0.66
CALD1-219ENST00000480638 TOR4AQ9NXH8 423 aa10.92□□□□□ -0.66
CALD1-219ENST00000480638 NR1H3Q13133 447 aa10.91□□□□□ -0.66
CALD1-219ENST00000480638 TRMT44Q8IYL2 757 aaKnown RBP10.91□□□□□ -0.66
CALD1-219ENST00000480638 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
CALD1-219ENST00000480638 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
CALD1-219ENST00000480638 GFRA3O60609 400 aa10.9□□□□□ -0.66
CALD1-219ENST00000480638 MPNDQ8N594 471 aa10.89□□□□□ -0.67
CALD1-219ENST00000480638 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
CALD1-219ENST00000480638 TTC24A2A3L6 582 aaPredicted RBP10.88□□□□□ -0.67
CALD1-219ENST00000480638 NRG2O14511 850 aaPredicted RBP10.88□□□□□ -0.67
CALD1-219ENST00000480638 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
CALD1-219ENST00000480638 ALDH1A1P00352 501 aa10.87□□□□□ -0.67
CALD1-219ENST00000480638 CDK15Q96Q40 435 aa10.87□□□□□ -0.67
CALD1-219ENST00000480638 VAC14Q08AM6 782 aa10.86□□□□□ -0.67
CALD1-219ENST00000480638 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
CALD1-219ENST00000480638 WASHC4Q2M389 1173 aa10.86□□□□□ -0.67
CALD1-219ENST00000480638 MAP4K5Q9Y4K4 846 aa10.86□□□□□ -0.67
CALD1-219ENST00000480638 J3QL48 77 aa10.85□□□□□ -0.67
CALD1-219ENST00000480638 ARID5BQ14865 1188 aa10.85□□□□□ -0.67
CALD1-219ENST00000480638 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
CALD1-219ENST00000480638 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
CALD1-219ENST00000480638 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
CALD1-219ENST00000480638 A6NJR5 290 aa10.84□□□□□ -0.67
CALD1-219ENST00000480638 ADH1CP00326 375 aa10.84□□□□□ -0.67
CALD1-219ENST00000480638 SMPD1P17405 629 aa10.84□□□□□ -0.67
CALD1-219ENST00000480638 VASH1Q7L8A9 365 aaPredicted RBP10.84□□□□□ -0.67
CALD1-219ENST00000480638 DZIP3Q86Y13 1208 aaKnown RBP10.84□□□□□ -0.67
CALD1-219ENST00000480638 CDV3Q9UKY7 258 aaKnown RBP10.84□□□□□ -0.67
CALD1-219ENST00000480638 PCDHB9Q9Y5E1 797 aa10.84□□□□□ -0.67
CALD1-219ENST00000480638 FAM187AA6NFU0 413 aa10.83□□□□□ -0.68
CALD1-219ENST00000480638 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
CALD1-219ENST00000480638 WASF2Q9Y6W5 498 aa10.82□□□□□ -0.68
CALD1-219ENST00000480638 FSHRP23945 695 aa10.81□□□□□ -0.68
CALD1-219ENST00000480638 GRM5P41594 1212 aa10.81□□□□□ -0.68
CALD1-219ENST00000480638 NBPF20Q3BBV1 942 aa10.81□□□□□ -0.68
CALD1-219ENST00000480638 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
CALD1-219ENST00000480638 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
CALD1-219ENST00000480638 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms