RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 CD163L1Q9NR16 1453 aa16.94■□□□□ 0.3
CCM2-212ENST00000480382 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
CCM2-212ENST00000480382 ADAMTS2O95450 1211 aa16.94■□□□□ 0.3
CCM2-212ENST00000480382 TMF1P82094 1093 aa16.93■□□□□ 0.3
CCM2-212ENST00000480382 PLCH1Q4KWH8 1693 aa16.92■□□□□ 0.3
CCM2-212ENST00000480382 SLC24A1O60721 1099 aa16.92■□□□□ 0.3
CCM2-212ENST00000480382 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
CCM2-212ENST00000480382 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCM2-212ENST00000480382 TMC1Q8TDI8 760 aa16.92■□□□□ 0.3
CCM2-212ENST00000480382 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
CCM2-212ENST00000480382 RGS17Q9UGC6 210 aaPredicted RBP16.92■□□□□ 0.3
CCM2-212ENST00000480382 CPSF1Q10570 1443 aaKnown RBP16.92■□□□□ 0.3
CCM2-212ENST00000480382 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
CCM2-212ENST00000480382 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
CCM2-212ENST00000480382 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
CCM2-212ENST00000480382 BRD4O60885 1362 aaPredicted RBP16.9■□□□□ 0.3
CCM2-212ENST00000480382 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
CCM2-212ENST00000480382 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.3
CCM2-212ENST00000480382 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
CCM2-212ENST00000480382 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
CCM2-212ENST00000480382 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
CCM2-212ENST00000480382 AFF2P51816 1311 aa16.89■□□□□ 0.29
CCM2-212ENST00000480382 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
CCM2-212ENST00000480382 ABTB2Q8N961 1025 aa16.87■□□□□ 0.29
CCM2-212ENST00000480382 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
CCM2-212ENST00000480382 USP54Q70EL1 1684 aa16.87■□□□□ 0.29
CCM2-212ENST00000480382 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
CCM2-212ENST00000480382 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
CCM2-212ENST00000480382 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
CCM2-212ENST00000480382 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
CCM2-212ENST00000480382 TTC21BQ7Z4L5 1316 aa16.86■□□□□ 0.29
CCM2-212ENST00000480382 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
CCM2-212ENST00000480382 ILDR2Q71H61 639 aa16.85■□□□□ 0.29
CCM2-212ENST00000480382 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
CCM2-212ENST00000480382 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
CCM2-212ENST00000480382 SLIT3O75094 1523 aa16.85■□□□□ 0.29
CCM2-212ENST00000480382 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
CCM2-212ENST00000480382 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
CCM2-212ENST00000480382 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
CCM2-212ENST00000480382 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
CCM2-212ENST00000480382 USP19O94966 1318 aa16.84■□□□□ 0.29
CCM2-212ENST00000480382 ANKRD36BQ8N2N9 1353 aa16.84■□□□□ 0.29
CCM2-212ENST00000480382 SLIT2O94813 1529 aa16.83■□□□□ 0.28
CCM2-212ENST00000480382 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.28
CCM2-212ENST00000480382 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
CCM2-212ENST00000480382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCM2-212ENST00000480382 BCL9LQ86UU0 1499 aa16.81■□□□□ 0.28
CCM2-212ENST00000480382 NLRP6P59044 892 aa16.81■□□□□ 0.28
CCM2-212ENST00000480382 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
CCM2-212ENST00000480382 FNBP4Q8N3X1 1017 aaPredicted RBP16.81■□□□□ 0.28
CCM2-212ENST00000480382 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
CCM2-212ENST00000480382 KIAA0232Q92628 1395 aa16.8■□□□□ 0.28
CCM2-212ENST00000480382 USP21Q9UK80 565 aa16.8■□□□□ 0.28
CCM2-212ENST00000480382 LMO7Q8WWI1 1683 aa16.79■□□□□ 0.28
CCM2-212ENST00000480382 ATRNO75882 1429 aa16.79■□□□□ 0.28
CCM2-212ENST00000480382 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
CCM2-212ENST00000480382 ZC3H6P61129 1189 aaKnown RBP16.78■□□□□ 0.28
CCM2-212ENST00000480382 NME9Q86XW9 330 aa16.78■□□□□ 0.28
CCM2-212ENST00000480382 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
CCM2-212ENST00000480382 NFAT5O94916 1531 aa16.78■□□□□ 0.28
CCM2-212ENST00000480382 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
CCM2-212ENST00000480382 GCP02774 474 aa16.77■□□□□ 0.28
CCM2-212ENST00000480382 PRDM11Q9NQV5 511 aa16.77■□□□□ 0.28
CCM2-212ENST00000480382 OVOS2A0A0J9YW53 1432 aa16.77■□□□□ 0.27
CCM2-212ENST00000480382 OVOS2Q6IE36 1432 aa16.77■□□□□ 0.27
CCM2-212ENST00000480382 LTN1O94822 1766 aa16.77■□□□□ 0.27
CCM2-212ENST00000480382 CPDO75976 1380 aa16.77■□□□□ 0.27
CCM2-212ENST00000480382 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
CCM2-212ENST00000480382 QTRT2Q9H974 415 aaKnown RBP16.76■□□□□ 0.27
CCM2-212ENST00000480382 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
CCM2-212ENST00000480382 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
CCM2-212ENST00000480382 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
CCM2-212ENST00000480382 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
CCM2-212ENST00000480382 GLI3P10071 1580 aa16.75■□□□□ 0.27
CCM2-212ENST00000480382 COL18A1P39060 1754 aa16.74■□□□□ 0.27
CCM2-212ENST00000480382 SOX12O15370 315 aa16.74■□□□□ 0.27
CCM2-212ENST00000480382 BTG4Q9NY30 223 aa16.74■□□□□ 0.27
CCM2-212ENST00000480382 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
CCM2-212ENST00000480382 KIF7Q2M1P5 1343 aa16.73■□□□□ 0.27
CCM2-212ENST00000480382 RXRBP28702 533 aa16.73■□□□□ 0.27
CCM2-212ENST00000480382 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
CCM2-212ENST00000480382 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
CCM2-212ENST00000480382 RGS12O14924 1447 aa16.72■□□□□ 0.27
CCM2-212ENST00000480382 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
CCM2-212ENST00000480382 CDK12Q9NYV4 1490 aaPredicted RBP16.72■□□□□ 0.27
CCM2-212ENST00000480382 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
CCM2-212ENST00000480382 KCNH5Q8NCM2 988 aa16.71■□□□□ 0.27
CCM2-212ENST00000480382 CARD14Q9BXL6 1004 aa16.71■□□□□ 0.27
CCM2-212ENST00000480382 COL5A2P05997 1499 aaPredicted RBP16.69■□□□□ 0.26
CCM2-212ENST00000480382 ABCC6O95255 1503 aa16.69■□□□□ 0.26
CCM2-212ENST00000480382 AATKQ6ZMQ8 1374 aa16.68■□□□□ 0.26
CCM2-212ENST00000480382 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
CCM2-212ENST00000480382 FYB1O15117 783 aa16.68■□□□□ 0.26
CCM2-212ENST00000480382 VPS72Q15906 364 aa16.68■□□□□ 0.26
CCM2-212ENST00000480382 COG3Q96JB2 828 aa16.68■□□□□ 0.26
CCM2-212ENST00000480382 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
CCM2-212ENST00000480382 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
CCM2-212ENST00000480382 ARHGEF25Q86VW2 580 aa16.67■□□□□ 0.26
CCM2-212ENST00000480382 PANK3Q9H999 370 aa16.67■□□□□ 0.26
CCM2-212ENST00000480382 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms