RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
VCP-206ENST00000480327 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
VCP-206ENST00000480327 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
VCP-206ENST00000480327 RGPD1P0DJD0 1748 aa13.04□□□□□ -0.32
VCP-206ENST00000480327 LRP5O75197 1615 aa13.03□□□□□ -0.32
VCP-206ENST00000480327 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
VCP-206ENST00000480327 POGKQ9P215 609 aa13.03□□□□□ -0.32
VCP-206ENST00000480327 ATP7BP35670 1465 aa13.03□□□□□ -0.32
VCP-206ENST00000480327 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
VCP-206ENST00000480327 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
VCP-206ENST00000480327 KIAA1210Q9ULL0 1709 aa13□□□□□ -0.33
VCP-206ENST00000480327 CLSPNQ9HAW4 1339 aa13□□□□□ -0.33
VCP-206ENST00000480327 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
VCP-206ENST00000480327 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
VCP-206ENST00000480327 BTG4Q9NY30 223 aa13□□□□□ -0.33
VCP-206ENST00000480327 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
VCP-206ENST00000480327 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
VCP-206ENST00000480327 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
VCP-206ENST00000480327 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
VCP-206ENST00000480327 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
VCP-206ENST00000480327 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
VCP-206ENST00000480327 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
VCP-206ENST00000480327 LMO7Q8WWI1 1683 aa12.97□□□□□ -0.33
VCP-206ENST00000480327 NRKQ7Z2Y5 1582 aa12.97□□□□□ -0.33
VCP-206ENST00000480327 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
VCP-206ENST00000480327 RREB1Q92766 1687 aa12.95□□□□□ -0.34
VCP-206ENST00000480327 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
VCP-206ENST00000480327 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
VCP-206ENST00000480327 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
VCP-206ENST00000480327 POLR3AO14802 1390 aaPredicted RBP12.94□□□□□ -0.34
VCP-206ENST00000480327 CAMTA1Q9Y6Y1 1673 aa12.93□□□□□ -0.34
VCP-206ENST00000480327 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
VCP-206ENST00000480327 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
VCP-206ENST00000480327 SF3B2Q13435 895 aaKnown RBP12.93□□□□□ -0.34
VCP-206ENST00000480327 NBPF8Q3BBV2 869 aa12.93□□□□□ -0.34
VCP-206ENST00000480327 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
VCP-206ENST00000480327 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
VCP-206ENST00000480327 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
VCP-206ENST00000480327 A0A0G2JS52 829 aa12.92□□□□□ -0.34
VCP-206ENST00000480327 MYT1Q01538 1121 aa12.92□□□□□ -0.34
VCP-206ENST00000480327 EN1Q05925 392 aaPredicted RBP12.92□□□□□ -0.34
VCP-206ENST00000480327 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
VCP-206ENST00000480327 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
VCP-206ENST00000480327 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
VCP-206ENST00000480327 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
VCP-206ENST00000480327 CDK19Q9BWU1 502 aa12.91□□□□□ -0.34
VCP-206ENST00000480327 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
VCP-206ENST00000480327 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
VCP-206ENST00000480327 ACEP12821 1306 aa12.9□□□□□ -0.34
VCP-206ENST00000480327 SBF2Q86WG5 1849 aa12.9□□□□□ -0.34
VCP-206ENST00000480327 BAG6P46379 1132 aa12.9□□□□□ -0.34
VCP-206ENST00000480327 WNK3Q9BYP7 1800 aa12.9□□□□□ -0.34
VCP-206ENST00000480327 COL18A1P39060 1754 aa12.89□□□□□ -0.35
VCP-206ENST00000480327 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
VCP-206ENST00000480327 TRPM1Q7Z4N2 1603 aa12.89□□□□□ -0.35
VCP-206ENST00000480327 ZC3H6P61129 1189 aaKnown RBP12.89□□□□□ -0.35
VCP-206ENST00000480327 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
VCP-206ENST00000480327 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
VCP-206ENST00000480327 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
VCP-206ENST00000480327 PLEKHG3A1L390 1219 aa12.88□□□□□ -0.35
VCP-206ENST00000480327 EZH2Q15910 746 aaKnown RBP12.88□□□□□ -0.35
VCP-206ENST00000480327 USP19O94966 1318 aa12.88□□□□□ -0.35
VCP-206ENST00000480327 PIK3C2AO00443 1686 aa12.87□□□□□ -0.35
VCP-206ENST00000480327 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
VCP-206ENST00000480327 STRN4Q9NRL3 753 aa12.87□□□□□ -0.35
VCP-206ENST00000480327 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
VCP-206ENST00000480327 CPDO75976 1380 aa12.86□□□□□ -0.35
VCP-206ENST00000480327 R3HDM1Q15032 1099 aaKnown RBP12.86□□□□□ -0.35
VCP-206ENST00000480327 CCDC61Q9Y6R9 512 aa12.86□□□□□ -0.35
VCP-206ENST00000480327 AKAP12Q02952 1782 aa12.86□□□□□ -0.35
VCP-206ENST00000480327 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
VCP-206ENST00000480327 SLIT3O75094 1523 aa12.85□□□□□ -0.35
VCP-206ENST00000480327 TRIM37O94972 964 aa12.85□□□□□ -0.35
VCP-206ENST00000480327 LARP1Q6PKG0 1096 aaKnown RBP12.85□□□□□ -0.35
VCP-206ENST00000480327 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
VCP-206ENST00000480327 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
VCP-206ENST00000480327 BARGINQ6ZT62 677 aa12.84□□□□□ -0.35
VCP-206ENST00000480327 USP35Q9P2H5 1018 aa12.84□□□□□ -0.35
VCP-206ENST00000480327 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
VCP-206ENST00000480327 CARD11Q9BXL7 1154 aa12.83□□□□□ -0.36
VCP-206ENST00000480327 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
VCP-206ENST00000480327 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.36
VCP-206ENST00000480327 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
VCP-206ENST00000480327 CABP2Q9NPB3 220 aa12.82□□□□□ -0.36
VCP-206ENST00000480327 GCP02774 474 aa12.81□□□□□ -0.36
VCP-206ENST00000480327 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
VCP-206ENST00000480327 USP6P35125 1406 aa12.8□□□□□ -0.36
VCP-206ENST00000480327 APBA3O96018 575 aa12.8□□□□□ -0.36
VCP-206ENST00000480327 TCP11L2Q8N4U5 519 aa12.8□□□□□ -0.36
VCP-206ENST00000480327 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
VCP-206ENST00000480327 EVA1CP58658 441 aa12.79□□□□□ -0.36
VCP-206ENST00000480327 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
VCP-206ENST00000480327 CRB1P82279 1406 aa12.79□□□□□ -0.36
VCP-206ENST00000480327 SRPK2P78362 688 aaKnown RBP12.78□□□□□ -0.36
VCP-206ENST00000480327 CABP1Q9NZU7 370 aa12.78□□□□□ -0.36
VCP-206ENST00000480327 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
VCP-206ENST00000480327 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
VCP-206ENST00000480327 NLRP13Q86W25 1043 aa12.77□□□□□ -0.37
VCP-206ENST00000480327 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.37
VCP-206ENST00000480327 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms