RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 CLASRPQ8N2M8 674 aaKnown RBP16.33■□□□□ 0.2
MCF2L-225ENST00000480321 CCDC43Q96MW1 224 aaKnown RBP16.33■□□□□ 0.2
MCF2L-225ENST00000480321 CCDC66A2RUB6 948 aa16.32■□□□□ 0.2
MCF2L-225ENST00000480321 CAVIN1Q6NZI2 390 aaKnown RBP16.32■□□□□ 0.2
MCF2L-225ENST00000480321 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
MCF2L-225ENST00000480321 ZNF644Q9H582 1327 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-225ENST00000480321 PDIA4P13667 645 aaKnown RBP16.32■□□□□ 0.2
MCF2L-225ENST00000480321 CABP2Q9NPB3 220 aa16.32■□□□□ 0.2
MCF2L-225ENST00000480321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.32■□□□□ 0.2
MCF2L-225ENST00000480321 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
MCF2L-225ENST00000480321 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
MCF2L-225ENST00000480321 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
MCF2L-225ENST00000480321 ZNF396Q96N95 335 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-225ENST00000480321 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
MCF2L-225ENST00000480321 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
MCF2L-225ENST00000480321 NLRP6P59044 892 aa16.31■□□□□ 0.2
MCF2L-225ENST00000480321 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
MCF2L-225ENST00000480321 KINO60870 393 aaKnown RBP16.3■□□□□ 0.2
MCF2L-225ENST00000480321 WASHC4Q2M389 1173 aa16.3■□□□□ 0.2
MCF2L-225ENST00000480321 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-225ENST00000480321 CCDC27Q2M243 656 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 FYB1O15117 783 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 NEK4P51957 841 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-225ENST00000480321 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 TIAM1Q13009 1591 aa16.29■□□□□ 0.2
MCF2L-225ENST00000480321 FOSBP53539 338 aa16.28■□□□□ 0.2
MCF2L-225ENST00000480321 EXOSC9Q06265 439 aaKnown RBP16.28■□□□□ 0.2
MCF2L-225ENST00000480321 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
MCF2L-225ENST00000480321 GNAI2P04899 355 aa16.28■□□□□ 0.2
MCF2L-225ENST00000480321 TMEM132EQ6IEE7 984 aa16.28■□□□□ 0.2
MCF2L-225ENST00000480321 CCT4P50991 539 aaKnown RBP16.28■□□□□ 0.2
MCF2L-225ENST00000480321 AKNAQ7Z591 1439 aa16.28■□□□□ 0.2
MCF2L-225ENST00000480321 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
MCF2L-225ENST00000480321 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
MCF2L-225ENST00000480321 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
MCF2L-225ENST00000480321 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.2
MCF2L-225ENST00000480321 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-225ENST00000480321 SMARCE1Q969G3 411 aa16.27■□□□□ 0.2
MCF2L-225ENST00000480321 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
MCF2L-225ENST00000480321 SART3Q15020 963 aaKnown RBP16.27■□□□□ 0.19
MCF2L-225ENST00000480321 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 CFTRP13569 1480 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 CCDC192P0DO97 292 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
MCF2L-225ENST00000480321 FILIP1LQ4L180 1135 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
MCF2L-225ENST00000480321 PRXQ9BXM0 1461 aa16.25■□□□□ 0.19
MCF2L-225ENST00000480321 GRPEL1Q9HAV7 217 aa16.25■□□□□ 0.19
MCF2L-225ENST00000480321 SURF6O75683 361 aaKnown RBP16.25■□□□□ 0.19
MCF2L-225ENST00000480321 JMYQ8N9B5 988 aa16.25■□□□□ 0.19
MCF2L-225ENST00000480321 C9orf84Q5VXU9 1444 aa16.25■□□□□ 0.19
MCF2L-225ENST00000480321 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
MCF2L-225ENST00000480321 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
MCF2L-225ENST00000480321 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
MCF2L-225ENST00000480321 SUPT6HQ7KZ85 1726 aaKnown RBP16.24■□□□□ 0.19
MCF2L-225ENST00000480321 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
MCF2L-225ENST00000480321 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
MCF2L-225ENST00000480321 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
MCF2L-225ENST00000480321 TBC1D2BQ9UPU7 963 aa16.23■□□□□ 0.19
MCF2L-225ENST00000480321 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
MCF2L-225ENST00000480321 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
MCF2L-225ENST00000480321 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
MCF2L-225ENST00000480321 PDILTQ8N807 584 aa16.22■□□□□ 0.19
MCF2L-225ENST00000480321 DACH1Q9UI36 760 aa16.22■□□□□ 0.19
MCF2L-225ENST00000480321 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
MCF2L-225ENST00000480321 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
MCF2L-225ENST00000480321 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
MCF2L-225ENST00000480321 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-225ENST00000480321 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
MCF2L-225ENST00000480321 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-225ENST00000480321 MTMR7Q9Y216 660 aa16.22■□□□□ 0.19
MCF2L-225ENST00000480321 LRRCC1Q9C099 1032 aa16.21■□□□□ 0.19
MCF2L-225ENST00000480321 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.21■□□□□ 0.19
MCF2L-225ENST00000480321 CHD1LQ86WJ1 897 aa16.21■□□□□ 0.19
MCF2L-225ENST00000480321 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
MCF2L-225ENST00000480321 SMC2O95347 1197 aa16.21■□□□□ 0.18
MCF2L-225ENST00000480321 PLEKHO1Q53GL0 409 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-225ENST00000480321 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 MCM4P33991 863 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 KRT85P78386 507 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
MCF2L-225ENST00000480321 CFAP70Q5T0N1 1121 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 TXLNAP40222 546 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-225ENST00000480321 BCAR3O75815 825 aa16.2■□□□□ 0.18
MCF2L-225ENST00000480321 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-225ENST00000480321 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
MCF2L-225ENST00000480321 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
MCF2L-225ENST00000480321 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-225ENST00000480321 TXLNBQ8N3L3 684 aa16.19■□□□□ 0.18
MCF2L-225ENST00000480321 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-225ENST00000480321 STK38Q15208 465 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms