RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 FARP1Q9Y4F1 1045 aaPredicted RBP14.22□□□□□ -0.13
LINC00173-203ENST00000480237 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
LINC00173-203ENST00000480237 NSD3Q9BZ95 1437 aa14.22□□□□□ -0.13
LINC00173-203ENST00000480237 ATP7BP35670 1465 aa14.21□□□□□ -0.13
LINC00173-203ENST00000480237 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.14
LINC00173-203ENST00000480237 PER1O15534 1290 aaPredicted RBP14.21□□□□□ -0.14
LINC00173-203ENST00000480237 ANKRD36BQ8N2N9 1353 aa14.2□□□□□ -0.14
LINC00173-203ENST00000480237 RALBP1Q15311 655 aa14.2□□□□□ -0.14
LINC00173-203ENST00000480237 AMOTL2Q9Y2J4 779 aa14.2□□□□□ -0.14
LINC00173-203ENST00000480237 CC2D1BQ5T0F9 858 aaKnown RBP14.19□□□□□ -0.14
LINC00173-203ENST00000480237 CDK19Q9BWU1 502 aa14.19□□□□□ -0.14
LINC00173-203ENST00000480237 MYBBP1AQ9BQG0 1328 aaKnown RBP14.19□□□□□ -0.14
LINC00173-203ENST00000480237 NPC1L1Q9UHC9 1359 aa14.18□□□□□ -0.14
LINC00173-203ENST00000480237 NCKAP5LQ9HCH0 1330 aa14.18□□□□□ -0.14
LINC00173-203ENST00000480237 CD163L1Q9NR16 1453 aa14.18□□□□□ -0.14
LINC00173-203ENST00000480237 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
LINC00173-203ENST00000480237 SLC12A5Q9H2X9 1139 aa14.17□□□□□ -0.14
LINC00173-203ENST00000480237 MRS2Q9HD23 443 aa14.17□□□□□ -0.14
LINC00173-203ENST00000480237 A0A1W2PP64 1363 aa14.17□□□□□ -0.14
LINC00173-203ENST00000480237 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
LINC00173-203ENST00000480237 NKTRP30414 1462 aaKnown RBP14.16□□□□□ -0.14
LINC00173-203ENST00000480237 SHPRHQ149N8 1683 aa14.16□□□□□ -0.14
LINC00173-203ENST00000480237 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
LINC00173-203ENST00000480237 AMER1Q5JTC6 1135 aaPredicted RBP14.15□□□□□ -0.14
LINC00173-203ENST00000480237 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
LINC00173-203ENST00000480237 KCNA6P17658 529 aa14.14□□□□□ -0.15
LINC00173-203ENST00000480237 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
LINC00173-203ENST00000480237 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
LINC00173-203ENST00000480237 CCDC184Q52MB2 194 aa14.13□□□□□ -0.15
LINC00173-203ENST00000480237 CARD14Q9BXL6 1004 aa14.13□□□□□ -0.15
LINC00173-203ENST00000480237 TERF2IPQ9NYB0 399 aa14.13□□□□□ -0.15
LINC00173-203ENST00000480237 MARF1Q9Y4F3 1742 aaKnown RBP14.13□□□□□ -0.15
LINC00173-203ENST00000480237 NSD2O96028 1365 aa14.13□□□□□ -0.15
LINC00173-203ENST00000480237 POTEHQ6S545 545 aa14.13□□□□□ -0.15
LINC00173-203ENST00000480237 HDGFL2Q7Z4V5 671 aaPredicted RBP14.13□□□□□ -0.15
LINC00173-203ENST00000480237 ADGRL3Q9HAR2 1447 aa14.12□□□□□ -0.15
LINC00173-203ENST00000480237 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
LINC00173-203ENST00000480237 CGNL1Q0VF96 1302 aa14.12□□□□□ -0.15
LINC00173-203ENST00000480237 HSPA2P54652 639 aa14.12□□□□□ -0.15
LINC00173-203ENST00000480237 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
LINC00173-203ENST00000480237 LTN1O94822 1766 aa14.11□□□□□ -0.15
LINC00173-203ENST00000480237 NUDT16Q96DE0 195 aaKnown RBP14.11□□□□□ -0.15
LINC00173-203ENST00000480237 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
LINC00173-203ENST00000480237 ANKARQ7Z5J8 1434 aa14.1□□□□□ -0.15
LINC00173-203ENST00000480237 CABP1Q9NZU7 370 aa14.09□□□□□ -0.15
LINC00173-203ENST00000480237 PRR36Q9H6K5 1346 aa14.09□□□□□ -0.15
LINC00173-203ENST00000480237 CPSF1Q10570 1443 aaKnown RBP14.09□□□□□ -0.15
LINC00173-203ENST00000480237 EDC4Q6P2E9 1401 aaKnown RBP14.09□□□□□ -0.15
LINC00173-203ENST00000480237 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
LINC00173-203ENST00000480237 CCDC61Q9Y6R9 512 aa14.08□□□□□ -0.16
LINC00173-203ENST00000480237 NUTM2FA1L443 756 aa14.06□□□□□ -0.16
LINC00173-203ENST00000480237 PPP2R1AP30153 589 aa14.06□□□□□ -0.16
LINC00173-203ENST00000480237 NUBP1P53384 320 aa14.06□□□□□ -0.16
LINC00173-203ENST00000480237 TRPM3Q9HCF6 1732 aaPredicted RBP14.06□□□□□ -0.16
LINC00173-203ENST00000480237 MORC1Q86VD1 984 aa14.05□□□□□ -0.16
LINC00173-203ENST00000480237 C14orf37Q86TY3 774 aa14.05□□□□□ -0.16
LINC00173-203ENST00000480237 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
LINC00173-203ENST00000480237 USP6P35125 1406 aa14.03□□□□□ -0.16
LINC00173-203ENST00000480237 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC00173-203ENST00000480237 RASEFQ8IZ41 740 aa14.02□□□□□ -0.16
LINC00173-203ENST00000480237 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
LINC00173-203ENST00000480237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00173-203ENST00000480237 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
LINC00173-203ENST00000480237 RBM33Q96EV2 1170 aaKnown RBP14.01□□□□□ -0.17
LINC00173-203ENST00000480237 ACEP12821 1306 aa14.01□□□□□ -0.17
LINC00173-203ENST00000480237 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
LINC00173-203ENST00000480237 GGNBP2Q9H3C7 697 aa14□□□□□ -0.17
LINC00173-203ENST00000480237 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
LINC00173-203ENST00000480237 ALS2Q96Q42 1657 aa14□□□□□ -0.17
LINC00173-203ENST00000480237 POLR3AO14802 1390 aaPredicted RBP14□□□□□ -0.17
LINC00173-203ENST00000480237 PLEKHG3A1L390 1219 aa14□□□□□ -0.17
LINC00173-203ENST00000480237 RGPD5Q99666 1765 aa14□□□□□ -0.17
LINC00173-203ENST00000480237 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
LINC00173-203ENST00000480237 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
LINC00173-203ENST00000480237 PEAK1Q9H792 1746 aa13.99□□□□□ -0.17
LINC00173-203ENST00000480237 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
LINC00173-203ENST00000480237 DCCP43146 1447 aa13.99□□□□□ -0.17
LINC00173-203ENST00000480237 HAX1O00165 279 aa13.98□□□□□ -0.17
LINC00173-203ENST00000480237 FYB1O15117 783 aa13.98□□□□□ -0.17
LINC00173-203ENST00000480237 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
LINC00173-203ENST00000480237 PMFBP1Q8TBY8 1022 aa13.98□□□□□ -0.17
LINC00173-203ENST00000480237 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
LINC00173-203ENST00000480237 TMEM94Q12767 1356 aa13.98□□□□□ -0.17
LINC00173-203ENST00000480237 NGDNQ8NEJ9 315 aaKnown RBP13.97□□□□□ -0.17
LINC00173-203ENST00000480237 CIZ1Q9ULV3 898 aaPredicted RBP13.97□□□□□ -0.17
LINC00173-203ENST00000480237 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
LINC00173-203ENST00000480237 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
LINC00173-203ENST00000480237 WDR43Q15061 677 aaKnown RBP eCLIP13.96□□□□□ -0.17
LINC00173-203ENST00000480237 FAM212AQ96EL1 285 aa13.96□□□□□ -0.17
LINC00173-203ENST00000480237 COL3A1P02461 1466 aaPredicted RBP13.96□□□□□ -0.17
LINC00173-203ENST00000480237 OVOS2A0A0J9YW53 1432 aa13.96□□□□□ -0.18
LINC00173-203ENST00000480237 OVOS2Q6IE36 1432 aa13.96□□□□□ -0.18
LINC00173-203ENST00000480237 NME9Q86XW9 330 aa13.96□□□□□ -0.18
LINC00173-203ENST00000480237 INSRP06213 1382 aa13.95□□□□□ -0.18
LINC00173-203ENST00000480237 PHRF1Q9P1Y6 1649 aaKnown RBP13.95□□□□□ -0.18
LINC00173-203ENST00000480237 CRYBG1Q9Y4K1 1723 aa13.95□□□□□ -0.18
LINC00173-203ENST00000480237 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
LINC00173-203ENST00000480237 SSH2Q76I76 1423 aa13.95□□□□□ -0.18
LINC00173-203ENST00000480237 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
LINC00173-203ENST00000480237 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms