RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
ITGB1-212ENST00000480226 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
ITGB1-212ENST00000480226 DDRGK1Q96HY6 314 aa10.23□□□□□ -0.77
ITGB1-212ENST00000480226 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
ITGB1-212ENST00000480226 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
ITGB1-212ENST00000480226 SIAH2O43255 324 aa10.21□□□□□ -0.77
ITGB1-212ENST00000480226 ZNF511Q8NB15 262 aa10.21□□□□□ -0.77
ITGB1-212ENST00000480226 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-212ENST00000480226 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-212ENST00000480226 VARSP26640 1264 aaKnown RBP10.19□□□□□ -0.78
ITGB1-212ENST00000480226 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
ITGB1-212ENST00000480226 RTL5Q5HYW3 569 aaPredicted RBP10.19□□□□□ -0.78
ITGB1-212ENST00000480226 FAM117AQ9C073 453 aa10.19□□□□□ -0.78
ITGB1-212ENST00000480226 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
ITGB1-212ENST00000480226 POTECB2RU33 542 aa10.18□□□□□ -0.78
ITGB1-212ENST00000480226 PER1O15534 1290 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-212ENST00000480226 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
ITGB1-212ENST00000480226 HPS1Q92902 700 aa10.18□□□□□ -0.78
ITGB1-212ENST00000480226 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-212ENST00000480226 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
ITGB1-212ENST00000480226 DACH1Q9UI36 760 aa10.17□□□□□ -0.78
ITGB1-212ENST00000480226 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
ITGB1-212ENST00000480226 ARMC2Q8NEN0 867 aa10.16□□□□□ -0.78
ITGB1-212ENST00000480226 MPNDQ8N594 471 aa10.14□□□□□ -0.79
ITGB1-212ENST00000480226 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
ITGB1-212ENST00000480226 ZNF775Q96BV0 537 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-212ENST00000480226 GMPR2Q9P2T1 348 aaKnown RBP10.13□□□□□ -0.79
ITGB1-212ENST00000480226 AGERQ15109 404 aa10.12□□□□□ -0.79
ITGB1-212ENST00000480226 FOXJ1Q92949 421 aa10.12□□□□□ -0.79
ITGB1-212ENST00000480226 ATP13A2Q9NQ11 1180 aa10.12□□□□□ -0.79
ITGB1-212ENST00000480226 C11orf95C9JLR9 678 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-212ENST00000480226 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-212ENST00000480226 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-212ENST00000480226 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
ITGB1-212ENST00000480226 TLL2Q9Y6L7 1015 aa10.11□□□□□ -0.79
ITGB1-212ENST00000480226 CTDSPL2Q05D32 466 aa10.1□□□□□ -0.79
ITGB1-212ENST00000480226 NBPF14Q5TI25 921 aa10.1□□□□□ -0.79
ITGB1-212ENST00000480226 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
ITGB1-212ENST00000480226 PPP2R2DQ66LE6 453 aa10.09□□□□□ -0.79
ITGB1-212ENST00000480226 CAPN5O15484 640 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-212ENST00000480226 NEUROD2Q15784 382 aa10.08□□□□□ -0.8
ITGB1-212ENST00000480226 GPKOWQ92917 476 aaPredicted RBP eCLIP10.07□□□□□ -0.82e-6■■■■□ 21.7
ITGB1-212ENST00000480226 CDK15Q96Q40 435 aa10.07□□□□□ -0.8
ITGB1-212ENST00000480226 NNTQ13423 1086 aa10.06□□□□□ -0.8
ITGB1-212ENST00000480226 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
ITGB1-212ENST00000480226 KIFC2Q96AC6 838 aa10.06□□□□□ -0.8
ITGB1-212ENST00000480226 ADH1CP00326 375 aa10.05□□□□□ -0.8
ITGB1-212ENST00000480226 TPRNQ4KMQ1 711 aa10.05□□□□□ -0.8
ITGB1-212ENST00000480226 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
ITGB1-212ENST00000480226 AP1G2O75843 785 aa10.04□□□□□ -0.8
ITGB1-212ENST00000480226 LRRN4Q8WUT4 740 aa10.04□□□□□ -0.8
ITGB1-212ENST00000480226 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
ITGB1-212ENST00000480226 GOPCQ9HD26 462 aa10.04□□□□□ -0.8
ITGB1-212ENST00000480226 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-212ENST00000480226 FBXO31Q5XUX0 539 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-212ENST00000480226 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
ITGB1-212ENST00000480226 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-212ENST00000480226 NR5A1Q13285 461 aa10.02□□□□□ -0.81
ITGB1-212ENST00000480226 SH3BP5LQ7L8J4 393 aa10.02□□□□□ -0.81
ITGB1-212ENST00000480226 MAGEB6P1A0A0J9YX57 407 aa10.01□□□□□ -0.81
ITGB1-212ENST00000480226 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
ITGB1-212ENST00000480226 IL27Q8NEV9 243 aa10.01□□□□□ -0.81
ITGB1-212ENST00000480226 C1QTNF2Q9BXJ5 285 aa10.01□□□□□ -0.81
ITGB1-212ENST00000480226 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
ITGB1-212ENST00000480226 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
ITGB1-212ENST00000480226 PDXDC2PQ6P474 469 aa10□□□□□ -0.81
ITGB1-212ENST00000480226 BMP1P13497 986 aa9.99□□□□□ -0.81
ITGB1-212ENST00000480226 RFC5P40937 340 aa9.99□□□□□ -0.81
ITGB1-212ENST00000480226 NR6A1Q15406 480 aa9.99□□□□□ -0.81
ITGB1-212ENST00000480226 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
ITGB1-212ENST00000480226 PNMA1Q8ND90 353 aa9.99□□□□□ -0.81
ITGB1-212ENST00000480226 MAP4K5Q9Y4K4 846 aa9.99□□□□□ -0.81
ITGB1-212ENST00000480226 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
ITGB1-212ENST00000480226 TIMP2P16035 220 aa9.98□□□□□ -0.81
ITGB1-212ENST00000480226 GRM5P41594 1212 aa9.98□□□□□ -0.81
ITGB1-212ENST00000480226 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
ITGB1-212ENST00000480226 VASH1Q7L8A9 365 aaPredicted RBP9.98□□□□□ -0.81
ITGB1-212ENST00000480226 TRIM46Q7Z4K8 759 aa9.98□□□□□ -0.81
ITGB1-212ENST00000480226 ARHGAP9Q9BRR9 750 aa9.98□□□□□ -0.81
ITGB1-212ENST00000480226 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
ITGB1-212ENST00000480226 USP17L8P0C7I0 530 aa9.97□□□□□ -0.81
ITGB1-212ENST00000480226 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
ITGB1-212ENST00000480226 KLF16Q9BXK1 252 aaPredicted RBP9.97□□□□□ -0.81
ITGB1-212ENST00000480226 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.82
ITGB1-212ENST00000480226 SCARF1Q14162 830 aa9.96□□□□□ -0.82
ITGB1-212ENST00000480226 ERFEQ4G0M1 354 aa9.96□□□□□ -0.82
ITGB1-212ENST00000480226 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
ITGB1-212ENST00000480226 NR3C2P08235 984 aa9.95□□□□□ -0.82
ITGB1-212ENST00000480226 PTK2Q05397 1052 aa9.95□□□□□ -0.82
ITGB1-212ENST00000480226 MRPL14Q6P1L8 145 aaKnown RBP9.95□□□□□ -0.82
ITGB1-212ENST00000480226 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
ITGB1-212ENST00000480226 CDV3Q9UKY7 258 aaKnown RBP9.94□□□□□ -0.82
ITGB1-212ENST00000480226 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
ITGB1-212ENST00000480226 WFS1O76024 890 aa9.93□□□□□ -0.82
ITGB1-212ENST00000480226 FSHRP23945 695 aa9.93□□□□□ -0.82
ITGB1-212ENST00000480226 ITPKCQ96DU7 683 aa9.93□□□□□ -0.82
ITGB1-212ENST00000480226 ZFP42Q96MM3 310 aa9.93□□□□□ -0.82
ITGB1-212ENST00000480226 ZFAND3Q9H8U3 227 aa9.93□□□□□ -0.82
ITGB1-212ENST00000480226 SLC10A4Q96EP9 437 aa9.92□□□□□ -0.82
ITGB1-212ENST00000480226 HMX1Q9NP08 348 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms