RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
PKNOX1-206ENST00000480179 NUDT16Q96DE0 195 aaKnown RBP19.31■□□□□ 0.68
PKNOX1-206ENST00000480179 FYB1O15117 783 aa19.3■□□□□ 0.68
PKNOX1-206ENST00000480179 CDCA7LQ96GN5 454 aa19.3■□□□□ 0.68
PKNOX1-206ENST00000480179 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
PKNOX1-206ENST00000480179 SLAIN2Q9P270 581 aa19.3■□□□□ 0.68
PKNOX1-206ENST00000480179 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
PKNOX1-206ENST00000480179 AMOTL2Q9Y2J4 779 aa19.29■□□□□ 0.68
PKNOX1-206ENST00000480179 XRN1Q8IZH2 1706 aaKnown RBP19.29■□□□□ 0.68
PKNOX1-206ENST00000480179 MON2Q7Z3U7 1717 aa19.28■□□□□ 0.68
PKNOX1-206ENST00000480179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.28■□□□□ 0.68
PKNOX1-206ENST00000480179 AKAP12Q02952 1782 aa19.28■□□□□ 0.68
PKNOX1-206ENST00000480179 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
PKNOX1-206ENST00000480179 C14orf37Q86TY3 774 aa19.28■□□□□ 0.68
PKNOX1-206ENST00000480179 TOPAZ1Q8N9V7 1692 aa19.28■□□□□ 0.68
PKNOX1-206ENST00000480179 PRR36Q9H6K5 1346 aa19.27■□□□□ 0.68
PKNOX1-206ENST00000480179 NWD1Q149M9 1564 aa19.27■□□□□ 0.68
PKNOX1-206ENST00000480179 CPSF1Q10570 1443 aaKnown RBP19.27■□□□□ 0.68
PKNOX1-206ENST00000480179 EDC4Q6P2E9 1401 aaKnown RBP19.26■□□□□ 0.67
PKNOX1-206ENST00000480179 CCDC61Q9Y6R9 512 aa19.25■□□□□ 0.67
PKNOX1-206ENST00000480179 ROBO1Q9Y6N7 1651 aa19.25■□□□□ 0.67
PKNOX1-206ENST00000480179 APAF1O14727 1248 aa19.25■□□□□ 0.67
PKNOX1-206ENST00000480179 RGS17Q9UGC6 210 aaPredicted RBP19.25■□□□□ 0.67
PKNOX1-206ENST00000480179 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
PKNOX1-206ENST00000480179 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
PKNOX1-206ENST00000480179 COL3A1P02461 1466 aaPredicted RBP19.22■□□□□ 0.67
PKNOX1-206ENST00000480179 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
PKNOX1-206ENST00000480179 NUTM2FA1L443 756 aa19.22■□□□□ 0.67
PKNOX1-206ENST00000480179 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
PKNOX1-206ENST00000480179 ZNF521Q96K83 1311 aa19.21■□□□□ 0.67
PKNOX1-206ENST00000480179 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
PKNOX1-206ENST00000480179 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.67
PKNOX1-206ENST00000480179 PIK3R4Q99570 1358 aa19.2■□□□□ 0.66
PKNOX1-206ENST00000480179 ATF3P18847 181 aa19.2■□□□□ 0.66
PKNOX1-206ENST00000480179 CADPS2Q86UW7 1296 aa19.2■□□□□ 0.66
PKNOX1-206ENST00000480179 NME9Q86XW9 330 aa19.2■□□□□ 0.66
PKNOX1-206ENST00000480179 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
PKNOX1-206ENST00000480179 NRKQ7Z2Y5 1582 aa19.19■□□□□ 0.66
PKNOX1-206ENST00000480179 JCADQ9P266 1359 aa19.18■□□□□ 0.66
PKNOX1-206ENST00000480179 GOLGA2Q08379 1002 aa19.18■□□□□ 0.66
PKNOX1-206ENST00000480179 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
PKNOX1-206ENST00000480179 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
PKNOX1-206ENST00000480179 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
PKNOX1-206ENST00000480179 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
PKNOX1-206ENST00000480179 RRP1P56182 461 aaKnown RBP19.17■□□□□ 0.66
PKNOX1-206ENST00000480179 PPP4R2Q9NY27 417 aa19.17■□□□□ 0.66
PKNOX1-206ENST00000480179 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
PKNOX1-206ENST00000480179 MAP2P11137 1827 aaKnown RBP19.15■□□□□ 0.66
PKNOX1-206ENST00000480179 U2SURPO15042 1029 aaKnown RBP19.15■□□□□ 0.66
PKNOX1-206ENST00000480179 POTEAQ6S8J7 498 aa19.15■□□□□ 0.66
PKNOX1-206ENST00000480179 ACEP12821 1306 aa19.15■□□□□ 0.66
PKNOX1-206ENST00000480179 FBLN1P23142 703 aa19.14■□□□□ 0.66
PKNOX1-206ENST00000480179 ZNF692Q9BU19 519 aaPredicted RBP19.14■□□□□ 0.66
PKNOX1-206ENST00000480179 RRP7AQ9Y3A4 280 aaKnown RBP19.14■□□□□ 0.66
PKNOX1-206ENST00000480179 PHLPP1O60346 1717 aa19.14■□□□□ 0.66
PKNOX1-206ENST00000480179 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.65
PKNOX1-206ENST00000480179 NGEFQ8N5V2 710 aa19.14■□□□□ 0.65
PKNOX1-206ENST00000480179 FMN2Q9NZ56 1722 aa19.13■□□□□ 0.65
PKNOX1-206ENST00000480179 PLEKHG3A1L390 1219 aa19.13■□□□□ 0.65
PKNOX1-206ENST00000480179 PPM1GO15355 546 aaPredicted RBP19.13■□□□□ 0.65
PKNOX1-206ENST00000480179 TCP11L2Q8N4U5 519 aa19.13■□□□□ 0.65
PKNOX1-206ENST00000480179 COG3Q96JB2 828 aa19.13■□□□□ 0.65
PKNOX1-206ENST00000480179 NALCNQ8IZF0 1738 aa19.13■□□□□ 0.65
PKNOX1-206ENST00000480179 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
PKNOX1-206ENST00000480179 NEUROD2Q15784 382 aa19.12■□□□□ 0.65
PKNOX1-206ENST00000480179 USP6P35125 1406 aa19.12■□□□□ 0.65
PKNOX1-206ENST00000480179 DIAPH1O60610 1272 aaKnown RBP19.11■□□□□ 0.65
PKNOX1-206ENST00000480179 POLKQ9UBT6 870 aa19.11■□□□□ 0.65
PKNOX1-206ENST00000480179 TTC21BQ7Z4L5 1316 aa19.11■□□□□ 0.65
PKNOX1-206ENST00000480179 PNPLA6Q8IY17 1366 aa19.11■□□□□ 0.65
PKNOX1-206ENST00000480179 MEX3CQ5U5Q3 659 aaKnown RBP19.11■□□□□ 0.65
PKNOX1-206ENST00000480179 SPATA31A6Q5VVP1 1343 aa19.1■□□□□ 0.65
PKNOX1-206ENST00000480179 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
PKNOX1-206ENST00000480179 WWC1Q8IX03 1113 aa19.09■□□□□ 0.65
PKNOX1-206ENST00000480179 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
PKNOX1-206ENST00000480179 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
PKNOX1-206ENST00000480179 B4GALNT3Q6L9W6 998 aa19.08■□□□□ 0.65
PKNOX1-206ENST00000480179 CDK12Q9NYV4 1490 aaPredicted RBP19.08■□□□□ 0.65
PKNOX1-206ENST00000480179 ANKARQ7Z5J8 1434 aa19.08■□□□□ 0.64
PKNOX1-206ENST00000480179 E9PSI1 815 aa19.08■□□□□ 0.64
PKNOX1-206ENST00000480179 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
PKNOX1-206ENST00000480179 TRMT2AQ8IZ69 625 aaKnown RBP19.07■□□□□ 0.64
PKNOX1-206ENST00000480179 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
PKNOX1-206ENST00000480179 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
PKNOX1-206ENST00000480179 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
PKNOX1-206ENST00000480179 COL16A1Q07092 1604 aaPredicted RBP19.06■□□□□ 0.64
PKNOX1-206ENST00000480179 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
PKNOX1-206ENST00000480179 ZNF772Q68DY9 489 aaPredicted RBP19.05■□□□□ 0.64
PKNOX1-206ENST00000480179 BRINP3Q76B58 766 aa19.05■□□□□ 0.64
PKNOX1-206ENST00000480179 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
PKNOX1-206ENST00000480179 DCCP43146 1447 aa19.05■□□□□ 0.64
PKNOX1-206ENST00000480179 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
PKNOX1-206ENST00000480179 PLIN1O60240 522 aa19.04■□□□□ 0.64
PKNOX1-206ENST00000480179 PLEKHF1Q96S99 279 aa19.04■□□□□ 0.64
PKNOX1-206ENST00000480179 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
PKNOX1-206ENST00000480179 ADGRL3Q9HAR2 1447 aa19.02■□□□□ 0.64
PKNOX1-206ENST00000480179 CCDC27Q2M243 656 aa19.02■□□□□ 0.63
PKNOX1-206ENST00000480179 EXOC6Q8TAG9 804 aa19.02■□□□□ 0.63
PKNOX1-206ENST00000480179 PIK3C2AO00443 1686 aa19.02■□□□□ 0.63
PKNOX1-206ENST00000480179 TTC21AQ8NDW8 1320 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms