RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
RPP40-205ENST00000479782 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
RPP40-205ENST00000479782 FYB1O15117 783 aa19.25■□□□□ 0.67
RPP40-205ENST00000479782 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
RPP40-205ENST00000479782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
RPP40-205ENST00000479782 SLAIN2Q9P270 581 aa19.25■□□□□ 0.67
RPP40-205ENST00000479782 PSME1Q06323 249 aa19.23■□□□□ 0.67
RPP40-205ENST00000479782 MORC1Q86VD1 984 aa19.23■□□□□ 0.67
RPP40-205ENST00000479782 USP54Q70EL1 1684 aa19.23■□□□□ 0.67
RPP40-205ENST00000479782 TRPM3Q9HCF6 1732 aaPredicted RBP19.22■□□□□ 0.67
RPP40-205ENST00000479782 PIK3C2AO00443 1686 aa19.21■□□□□ 0.67
RPP40-205ENST00000479782 FOXO3O43524 673 aa19.21■□□□□ 0.67
RPP40-205ENST00000479782 BRINP3Q76B58 766 aa19.21■□□□□ 0.67
RPP40-205ENST00000479782 GGNBP2Q9H3C7 697 aa19.21■□□□□ 0.67
RPP40-205ENST00000479782 NPHP3Q7Z494 1330 aa19.21■□□□□ 0.67
RPP40-205ENST00000479782 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
RPP40-205ENST00000479782 NME9Q86XW9 330 aa19.2■□□□□ 0.66
RPP40-205ENST00000479782 COG3Q96JB2 828 aa19.19■□□□□ 0.66
RPP40-205ENST00000479782 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
RPP40-205ENST00000479782 USP31Q70CQ4 1352 aa19.19■□□□□ 0.66
RPP40-205ENST00000479782 NHSL1Q5SYE7 1610 aa19.18■□□□□ 0.66
RPP40-205ENST00000479782 OVOS2A0A0J9YW53 1432 aa19.18■□□□□ 0.66
RPP40-205ENST00000479782 OVOS2Q6IE36 1432 aa19.18■□□□□ 0.66
RPP40-205ENST00000479782 PXDNQ92626 1479 aa19.17■□□□□ 0.66
RPP40-205ENST00000479782 PPP2R1AP30153 589 aa19.17■□□□□ 0.66
RPP40-205ENST00000479782 KRT28Q7Z3Y7 464 aa19.17■□□□□ 0.66
RPP40-205ENST00000479782 ALS2Q96Q42 1657 aa19.16■□□□□ 0.66
RPP40-205ENST00000479782 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
RPP40-205ENST00000479782 SBNO1A3KN83 1393 aa19.16■□□□□ 0.66
RPP40-205ENST00000479782 MARF1Q9Y4F3 1742 aaKnown RBP19.15■□□□□ 0.66
RPP40-205ENST00000479782 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
RPP40-205ENST00000479782 TOM1O60784 492 aa19.14■□□□□ 0.65
RPP40-205ENST00000479782 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
RPP40-205ENST00000479782 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
RPP40-205ENST00000479782 MRS2Q9HD23 443 aa19.13■□□□□ 0.65
RPP40-205ENST00000479782 AHDC1Q5TGY3 1603 aaPredicted RBP19.12■□□□□ 0.65
RPP40-205ENST00000479782 TNS3Q68CZ2 1445 aa19.12■□□□□ 0.65
RPP40-205ENST00000479782 NLRP6P59044 892 aa19.12■□□□□ 0.65
RPP40-205ENST00000479782 XPCQ01831 940 aaPredicted RBP19.12■□□□□ 0.65
RPP40-205ENST00000479782 ZRANB1Q9UGI0 708 aa19.12■□□□□ 0.65
RPP40-205ENST00000479782 SOS2Q07890 1332 aaPredicted RBP19.11■□□□□ 0.65
RPP40-205ENST00000479782 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
RPP40-205ENST00000479782 CERKQ8TCT0 537 aa19.11■□□□□ 0.65
RPP40-205ENST00000479782 SMG6Q86US8 1419 aaKnown RBP19.09■□□□□ 0.65
RPP40-205ENST00000479782 ARHGEF10O15013 1369 aa19.09■□□□□ 0.65
RPP40-205ENST00000479782 CCDC184Q52MB2 194 aa19.09■□□□□ 0.65
RPP40-205ENST00000479782 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
RPP40-205ENST00000479782 MAP2P11137 1827 aaKnown RBP19.09■□□□□ 0.65
RPP40-205ENST00000479782 SLIT3O75094 1523 aa19.08■□□□□ 0.64
RPP40-205ENST00000479782 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
RPP40-205ENST00000479782 SPATA31A3Q5VYP0 1347 aa19.07■□□□□ 0.64
RPP40-205ENST00000479782 MTHFSP49914 203 aa19.06■□□□□ 0.64
RPP40-205ENST00000479782 CFAP53Q96M91 514 aa19.06■□□□□ 0.64
RPP40-205ENST00000479782 USP19O94966 1318 aa19.05■□□□□ 0.64
RPP40-205ENST00000479782 UBAP1LF5GYI3 381 aa19.05■□□□□ 0.64
RPP40-205ENST00000479782 NUTM2GQ5VZR2 741 aa19.05■□□□□ 0.64
RPP40-205ENST00000479782 CDK12Q9NYV4 1490 aaPredicted RBP19.04■□□□□ 0.64
RPP40-205ENST00000479782 LMOD2Q6P5Q4 547 aa19.04■□□□□ 0.64
RPP40-205ENST00000479782 KCNH5Q8NCM2 988 aa19.04■□□□□ 0.64
RPP40-205ENST00000479782 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
RPP40-205ENST00000479782 CRYBG1Q9Y4K1 1723 aa19.04■□□□□ 0.64
RPP40-205ENST00000479782 NFAT5O94916 1531 aa19.04■□□□□ 0.64
RPP40-205ENST00000479782 INSRP06213 1382 aa19.04■□□□□ 0.64
RPP40-205ENST00000479782 PHRF1Q9P1Y6 1649 aaKnown RBP19.03■□□□□ 0.64
RPP40-205ENST00000479782 PHLPP1O60346 1717 aa19.03■□□□□ 0.64
RPP40-205ENST00000479782 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
RPP40-205ENST00000479782 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
RPP40-205ENST00000479782 PNPLA6Q8IY17 1366 aa19.03■□□□□ 0.64
RPP40-205ENST00000479782 COL3A1P02461 1466 aaPredicted RBP19.01■□□□□ 0.63
RPP40-205ENST00000479782 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
RPP40-205ENST00000479782 LTN1O94822 1766 aa19.01■□□□□ 0.63
RPP40-205ENST00000479782 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
RPP40-205ENST00000479782 FBLN1P23142 703 aa19■□□□□ 0.63
RPP40-205ENST00000479782 PIP4K2BP78356 416 aa19■□□□□ 0.63
RPP40-205ENST00000479782 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
RPP40-205ENST00000479782 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
RPP40-205ENST00000479782 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
RPP40-205ENST00000479782 PEAK1Q9H792 1746 aa19■□□□□ 0.63
RPP40-205ENST00000479782 RTL1A6NKG5 1358 aa18.99■□□□□ 0.63
RPP40-205ENST00000479782 GCP02774 474 aa18.99■□□□□ 0.63
RPP40-205ENST00000479782 FLT4P35916 1363 aa18.98■□□□□ 0.63
RPP40-205ENST00000479782 ABCA3Q99758 1704 aa18.98■□□□□ 0.63
RPP40-205ENST00000479782 SOX12O15370 315 aa18.98■□□□□ 0.63
RPP40-205ENST00000479782 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
RPP40-205ENST00000479782 COL22A1Q8NFW1 1626 aaPredicted RBP18.98■□□□□ 0.63
RPP40-205ENST00000479782 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
RPP40-205ENST00000479782 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
RPP40-205ENST00000479782 WDR43Q15061 677 aaKnown RBP eCLIP18.97■□□□□ 0.63
RPP40-205ENST00000479782 ABCC6O95255 1503 aa18.95■□□□□ 0.62
RPP40-205ENST00000479782 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
RPP40-205ENST00000479782 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
RPP40-205ENST00000479782 AMPHP49418 695 aa18.94■□□□□ 0.62
RPP40-205ENST00000479782 ARHGEF25Q86VW2 580 aa18.93■□□□□ 0.62
RPP40-205ENST00000479782 CPDO75976 1380 aa18.92■□□□□ 0.62
RPP40-205ENST00000479782 HOXC9P31274 260 aa18.91■□□□□ 0.62
RPP40-205ENST00000479782 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
RPP40-205ENST00000479782 CABLES1Q8TDN4 633 aa18.9■□□□□ 0.62
RPP40-205ENST00000479782 IP6K1Q92551 441 aa18.9■□□□□ 0.62
RPP40-205ENST00000479782 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
RPP40-205ENST00000479782 IL13P35225 146 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms