RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 NUTM2GQ5VZR2 741 aa26.43■■□□□ 1.82
AGRN-208ENST00000479707 ALS2Q96Q42 1657 aa26.43■■□□□ 1.82
AGRN-208ENST00000479707 SLC12A5Q9H2X9 1139 aa26.42■■□□□ 1.82
AGRN-208ENST00000479707 PUS7Q96PZ0 661 aaKnown RBP26.4■■□□□ 1.82
AGRN-208ENST00000479707 ABTB2Q8N961 1025 aa26.39■■□□□ 1.82
AGRN-208ENST00000479707 NGLY1Q96IV0 654 aa26.39■■□□□ 1.82
AGRN-208ENST00000479707 USP6P35125 1406 aa26.39■■□□□ 1.81
AGRN-208ENST00000479707 ZNF692Q9BU19 519 aaPredicted RBP26.38■■□□□ 1.81
AGRN-208ENST00000479707 AKAP12Q02952 1782 aa26.38■■□□□ 1.81
AGRN-208ENST00000479707 AFF2P51816 1311 aa26.37■■□□□ 1.81
AGRN-208ENST00000479707 KTN1Q86UP2 1357 aaKnown RBP26.35■■□□□ 1.81
AGRN-208ENST00000479707 CPSF1Q10570 1443 aaKnown RBP26.35■■□□□ 1.81
AGRN-208ENST00000479707 ILDR2Q71H61 639 aa26.35■■□□□ 1.81
AGRN-208ENST00000479707 ABCA3Q99758 1704 aa26.34■■□□□ 1.81
AGRN-208ENST00000479707 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
AGRN-208ENST00000479707 POTEAQ6S8J7 498 aa26.34■■□□□ 1.81
AGRN-208ENST00000479707 HDGFL2Q7Z4V5 671 aaPredicted RBP26.34■■□□□ 1.81
AGRN-208ENST00000479707 CDCA8Q53HL2 280 aa26.33■■□□□ 1.81
AGRN-208ENST00000479707 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
AGRN-208ENST00000479707 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
AGRN-208ENST00000479707 TTC21BQ7Z4L5 1316 aa26.32■■□□□ 1.8
AGRN-208ENST00000479707 BRD4O60885 1362 aaPredicted RBP26.32■■□□□ 1.8
AGRN-208ENST00000479707 ZNF772Q68DY9 489 aaPredicted RBP26.31■■□□□ 1.8
AGRN-208ENST00000479707 TERF2IPQ9NYB0 399 aa26.31■■□□□ 1.8
AGRN-208ENST00000479707 SSH2Q76I76 1423 aa26.31■■□□□ 1.8
AGRN-208ENST00000479707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.3■■□□□ 1.8
AGRN-208ENST00000479707 MON2Q7Z3U7 1717 aa26.29■■□□□ 1.8
AGRN-208ENST00000479707 NLRP6P59044 892 aa26.29■■□□□ 1.8
AGRN-208ENST00000479707 NLRP13Q86W25 1043 aa26.29■■□□□ 1.8
AGRN-208ENST00000479707 CRYBG1Q9Y4K1 1723 aa26.28■■□□□ 1.8
AGRN-208ENST00000479707 A0A1W2PP64 1363 aa26.28■■□□□ 1.8
AGRN-208ENST00000479707 USP21Q9UK80 565 aa26.27■■□□□ 1.8
AGRN-208ENST00000479707 NINLQ9Y2I6 1382 aa26.27■■□□□ 1.8
AGRN-208ENST00000479707 PHRF1Q9P1Y6 1649 aaKnown RBP26.25■■□□□ 1.79
AGRN-208ENST00000479707 NRKQ7Z2Y5 1582 aa26.25■■□□□ 1.79
AGRN-208ENST00000479707 TTC21AQ8NDW8 1320 aa26.25■■□□□ 1.79
AGRN-208ENST00000479707 FAM83GA6ND36 823 aa26.25■■□□□ 1.79
AGRN-208ENST00000479707 ZC3H6P61129 1189 aaKnown RBP26.25■■□□□ 1.79
AGRN-208ENST00000479707 FNBP4Q8N3X1 1017 aaPredicted RBP26.25■■□□□ 1.79
AGRN-208ENST00000479707 PIK3C2AO00443 1686 aa26.25■■□□□ 1.79
AGRN-208ENST00000479707 QTRT2Q9H974 415 aaKnown RBP26.24■■□□□ 1.79
AGRN-208ENST00000479707 ZRANB1Q9UGI0 708 aa26.23■■□□□ 1.79
AGRN-208ENST00000479707 C11orf95C9JLR9 678 aaPredicted RBP26.22■■□□□ 1.79
AGRN-208ENST00000479707 NME9Q86XW9 330 aa26.22■■□□□ 1.79
AGRN-208ENST00000479707 USP19O94966 1318 aa26.21■■□□□ 1.79
AGRN-208ENST00000479707 GCP02774 474 aa26.21■■□□□ 1.79
AGRN-208ENST00000479707 EDC4Q6P2E9 1401 aaKnown RBP26.21■■□□□ 1.79
AGRN-208ENST00000479707 ANKRD36BQ8N2N9 1353 aa26.2■■□□□ 1.79
AGRN-208ENST00000479707 PRDM11Q9NQV5 511 aa26.2■■□□□ 1.78
AGRN-208ENST00000479707 KIAA0232Q92628 1395 aa26.2■■□□□ 1.78
AGRN-208ENST00000479707 MYOM1P52179 1685 aa26.19■■□□□ 1.78
AGRN-208ENST00000479707 ZBTB7CA1YPR0 619 aa26.19■■□□□ 1.78
AGRN-208ENST00000479707 SOX12O15370 315 aa26.19■■□□□ 1.78
AGRN-208ENST00000479707 CHRNA2Q15822 529 aa26.19■■□□□ 1.78
AGRN-208ENST00000479707 BCL9LQ86UU0 1499 aa26.18■■□□□ 1.78
AGRN-208ENST00000479707 PLCH1Q4KWH8 1693 aa26.18■■□□□ 1.78
AGRN-208ENST00000479707 SLIT2O94813 1529 aa26.18■■□□□ 1.78
AGRN-208ENST00000479707 RXRBP28702 533 aa26.17■■□□□ 1.78
AGRN-208ENST00000479707 UNC5CLQ8IV45 518 aa26.17■■□□□ 1.78
AGRN-208ENST00000479707 TRPC5Q9UL62 973 aaPredicted RBP26.17■■□□□ 1.78
AGRN-208ENST00000479707 BTG4Q9NY30 223 aa26.16■■□□□ 1.78
AGRN-208ENST00000479707 COL14A1Q05707 1796 aaKnown RBP26.15■■□□□ 1.78
AGRN-208ENST00000479707 SLIT3O75094 1523 aa26.14■■□□□ 1.77
AGRN-208ENST00000479707 NWD2Q9ULI1 1742 aa26.12■■□□□ 1.77
AGRN-208ENST00000479707 CARD14Q9BXL6 1004 aa26.12■■□□□ 1.77
AGRN-208ENST00000479707 ATRNO75882 1429 aa26.12■■□□□ 1.77
AGRN-208ENST00000479707 USP31Q70CQ4 1352 aa26.11■■□□□ 1.77
AGRN-208ENST00000479707 RBM6P78332 1123 aaKnown RBP26.11■■□□□ 1.77
AGRN-208ENST00000479707 KCNH5Q8NCM2 988 aa26.11■■□□□ 1.77
AGRN-208ENST00000479707 CCDC9Q9Y3X0 531 aaKnown RBP26.11■■□□□ 1.77
AGRN-208ENST00000479707 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.1■■□□□ 1.77
AGRN-208ENST00000479707 KIF7Q2M1P5 1343 aa26.09■■□□□ 1.77
AGRN-208ENST00000479707 CPDO75976 1380 aa26.08■■□□□ 1.77
AGRN-208ENST00000479707 GGNBP2Q9H3C7 697 aa26.08■■□□□ 1.77
AGRN-208ENST00000479707 STRN4Q9NRL3 753 aa26.08■■□□□ 1.77
AGRN-208ENST00000479707 NSD3Q9BZ95 1437 aa26.07■■□□□ 1.76
AGRN-208ENST00000479707 FYB1O15117 783 aa26.07■■□□□ 1.76
AGRN-208ENST00000479707 COG3Q96JB2 828 aa26.07■■□□□ 1.76
AGRN-208ENST00000479707 GJD4Q96KN9 370 aaPredicted RBP26.07■■□□□ 1.76
AGRN-208ENST00000479707 PANK3Q9H999 370 aa26.07■■□□□ 1.76
AGRN-208ENST00000479707 NRAPQ86VF7 1730 aa26.07■■□□□ 1.76
AGRN-208ENST00000479707 VPS72Q15906 364 aa26.06■■□□□ 1.76
AGRN-208ENST00000479707 USP54Q70EL1 1684 aa26.06■■□□□ 1.76
AGRN-208ENST00000479707 EVA1CP58658 441 aa26.05■■□□□ 1.76
AGRN-208ENST00000479707 OVOS2A0A0J9YW53 1432 aa26.05■■□□□ 1.76
AGRN-208ENST00000479707 OVOS2Q6IE36 1432 aa26.05■■□□□ 1.76
AGRN-208ENST00000479707 ARHGEF25Q86VW2 580 aa26.04■■□□□ 1.76
AGRN-208ENST00000479707 CAMTA1Q9Y6Y1 1673 aa26.03■■□□□ 1.76
AGRN-208ENST00000479707 KIF20BQ96Q89 1820 aa26.03■■□□□ 1.76
AGRN-208ENST00000479707 NFAT5O94916 1531 aa26.03■■□□□ 1.76
AGRN-208ENST00000479707 FBLN1P23142 703 aa26.01■■□□□ 1.75
AGRN-208ENST00000479707 LMO7Q8WWI1 1683 aa26.01■■□□□ 1.75
AGRN-208ENST00000479707 GLI3P10071 1580 aa26■■□□□ 1.75
AGRN-208ENST00000479707 AXIN2Q9Y2T1 843 aa26■■□□□ 1.75
AGRN-208ENST00000479707 RGS12O14924 1447 aa25.99■■□□□ 1.75
AGRN-208ENST00000479707 AATKQ6ZMQ8 1374 aa25.99■■□□□ 1.75
AGRN-208ENST00000479707 WASHC2AQ641Q2 1341 aa25.99■■□□□ 1.75
AGRN-208ENST00000479707 COL18A1P39060 1754 aa25.99■■□□□ 1.75
AGRN-208ENST00000479707 RGPD5Q99666 1765 aa25.99■■□□□ 1.75
AGRN-208ENST00000479707 CCDC7Q96M83 1385 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms