RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
CLDN18-203ENST00000479660 NGDNQ8NEJ9 315 aaKnown RBP19.11■□□□□ 0.65
CLDN18-203ENST00000479660 ANKARQ7Z5J8 1434 aa19.11■□□□□ 0.65
CLDN18-203ENST00000479660 USP6P35125 1406 aa19.1■□□□□ 0.65
CLDN18-203ENST00000479660 APAF1O14727 1248 aa19.1■□□□□ 0.65
CLDN18-203ENST00000479660 FBLN1P23142 703 aa19.1■□□□□ 0.65
CLDN18-203ENST00000479660 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
CLDN18-203ENST00000479660 HSPA2P54652 639 aa19.08■□□□□ 0.65
CLDN18-203ENST00000479660 POLKQ9UBT6 870 aa19.08■□□□□ 0.65
CLDN18-203ENST00000479660 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
CLDN18-203ENST00000479660 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
CLDN18-203ENST00000479660 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.64
CLDN18-203ENST00000479660 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.64
CLDN18-203ENST00000479660 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
CLDN18-203ENST00000479660 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
CLDN18-203ENST00000479660 ADGRL3Q9HAR2 1447 aa19.07■□□□□ 0.64
CLDN18-203ENST00000479660 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
CLDN18-203ENST00000479660 PPM1GO15355 546 aaPredicted RBP19.07■□□□□ 0.64
CLDN18-203ENST00000479660 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
CLDN18-203ENST00000479660 NRKQ7Z2Y5 1582 aa19.06■□□□□ 0.64
CLDN18-203ENST00000479660 AATKQ6ZMQ8 1374 aa19.06■□□□□ 0.64
CLDN18-203ENST00000479660 NWD1Q149M9 1564 aa19.05■□□□□ 0.64
CLDN18-203ENST00000479660 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
CLDN18-203ENST00000479660 PROSER2Q86WR7 435 aaPredicted RBP19.05■□□□□ 0.64
CLDN18-203ENST00000479660 COL3A1P02461 1466 aaPredicted RBP19.05■□□□□ 0.64
CLDN18-203ENST00000479660 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
CLDN18-203ENST00000479660 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
CLDN18-203ENST00000479660 TTC21AQ8NDW8 1320 aa19.04■□□□□ 0.64
CLDN18-203ENST00000479660 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
CLDN18-203ENST00000479660 NGEFQ8N5V2 710 aa19.04■□□□□ 0.64
CLDN18-203ENST00000479660 ZNF521Q96K83 1311 aa19.04■□□□□ 0.64
CLDN18-203ENST00000479660 EMILIN1Q9Y6C2 1016 aa19.03■□□□□ 0.64
CLDN18-203ENST00000479660 GOLGA2Q08379 1002 aa19.01■□□□□ 0.63
CLDN18-203ENST00000479660 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
CLDN18-203ENST00000479660 PHF8Q9UPP1 1060 aa19.01■□□□□ 0.63
CLDN18-203ENST00000479660 OVOS2A0A0J9YW53 1432 aa19.01■□□□□ 0.63
CLDN18-203ENST00000479660 OVOS2Q6IE36 1432 aa19.01■□□□□ 0.63
CLDN18-203ENST00000479660 IRX6P78412 446 aaPredicted RBP19■□□□□ 0.63
CLDN18-203ENST00000479660 TCP11L2Q8N4U5 519 aa19■□□□□ 0.63
CLDN18-203ENST00000479660 ESCO1Q5FWF5 840 aa19■□□□□ 0.63
CLDN18-203ENST00000479660 LMTK3Q96Q04 1460 aa18.99■□□□□ 0.63
CLDN18-203ENST00000479660 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
CLDN18-203ENST00000479660 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
CLDN18-203ENST00000479660 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
CLDN18-203ENST00000479660 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
CLDN18-203ENST00000479660 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
CLDN18-203ENST00000479660 RCAN3Q9UKA8 241 aa18.96■□□□□ 0.63
CLDN18-203ENST00000479660 WWC1Q8IX03 1113 aa18.96■□□□□ 0.63
CLDN18-203ENST00000479660 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
CLDN18-203ENST00000479660 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
CLDN18-203ENST00000479660 SLFN5Q08AF3 891 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 DUSP27Q5VZP5 1158 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
CLDN18-203ENST00000479660 RNF123Q5XPI4 1314 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 IQSEC2Q5JU85 1478 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 SOX12O15370 315 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 IL13P35225 146 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 NLRP6P59044 892 aa18.95■□□□□ 0.62
CLDN18-203ENST00000479660 FCHSD2O94868 740 aa18.94■□□□□ 0.62
CLDN18-203ENST00000479660 ABTB2Q8N961 1025 aa18.94■□□□□ 0.62
CLDN18-203ENST00000479660 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
CLDN18-203ENST00000479660 MAPK8IP3Q9UPT6 1336 aa18.93■□□□□ 0.62
CLDN18-203ENST00000479660 PSME1Q06323 249 aa18.93■□□□□ 0.62
CLDN18-203ENST00000479660 E9PSI1 815 aa18.93■□□□□ 0.62
CLDN18-203ENST00000479660 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
CLDN18-203ENST00000479660 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
CLDN18-203ENST00000479660 PIK3C2AO00443 1686 aa18.92■□□□□ 0.62
CLDN18-203ENST00000479660 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
CLDN18-203ENST00000479660 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
CLDN18-203ENST00000479660 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
CLDN18-203ENST00000479660 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
CLDN18-203ENST00000479660 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
CLDN18-203ENST00000479660 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
CLDN18-203ENST00000479660 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
CLDN18-203ENST00000479660 DMRT2Q9Y5R5 561 aa18.91■□□□□ 0.62
CLDN18-203ENST00000479660 ATF3P18847 181 aa18.9■□□□□ 0.62
CLDN18-203ENST00000479660 NCOA3Q9Y6Q9 1424 aa18.9■□□□□ 0.62
CLDN18-203ENST00000479660 STRCQ7RTU9 1775 aa18.9■□□□□ 0.62
CLDN18-203ENST00000479660 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
CLDN18-203ENST00000479660 FOXO3O43524 673 aa18.89■□□□□ 0.61
CLDN18-203ENST00000479660 HMOX1P09601 288 aa18.89■□□□□ 0.61
CLDN18-203ENST00000479660 PRKAR2BP31323 418 aa18.89■□□□□ 0.61
CLDN18-203ENST00000479660 TMPOP42166 694 aaKnown RBP18.89■□□□□ 0.61
CLDN18-203ENST00000479660 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
CLDN18-203ENST00000479660 MAP3K19Q56UN5 1328 aa18.89■□□□□ 0.61
CLDN18-203ENST00000479660 NEFMP07197 916 aa18.88■□□□□ 0.61
CLDN18-203ENST00000479660 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
CLDN18-203ENST00000479660 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
CLDN18-203ENST00000479660 RRP1P56182 461 aaKnown RBP18.87■□□□□ 0.61
CLDN18-203ENST00000479660 EIF4A2Q14240 407 aaKnown RBP18.87■□□□□ 0.61
CLDN18-203ENST00000479660 LRRC7Q96NW7 1537 aa18.86■□□□□ 0.61
CLDN18-203ENST00000479660 AMPHP49418 695 aa18.85■□□□□ 0.61
CLDN18-203ENST00000479660 RIPK4P57078 832 aa18.85■□□□□ 0.61
CLDN18-203ENST00000479660 DCCP43146 1447 aa18.85■□□□□ 0.61
CLDN18-203ENST00000479660 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
CLDN18-203ENST00000479660 XPCQ01831 940 aaPredicted RBP18.84■□□□□ 0.61
CLDN18-203ENST00000479660 CADPS2Q86UW7 1296 aa18.84■□□□□ 0.61
CLDN18-203ENST00000479660 PEAK1Q9H792 1746 aa18.84■□□□□ 0.61
CLDN18-203ENST00000479660 FLT4P35916 1363 aa18.84■□□□□ 0.61
CLDN18-203ENST00000479660 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms