RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 HRCP23327 699 aa14.74□□□□□ -0.05
GPNMB-211ENST00000479625 KRT27Q7Z3Y8 459 aa14.74□□□□□ -0.05
GPNMB-211ENST00000479625 COL14A1Q05707 1796 aaKnown RBP14.74□□□□□ -0.05
GPNMB-211ENST00000479625 HAP1P54257 671 aaPredicted RBP14.73□□□□□ -0.05
GPNMB-211ENST00000479625 KRT28Q7Z3Y7 464 aa14.73□□□□□ -0.05
GPNMB-211ENST00000479625 NRXN1Q9ULB1 1477 aa14.73□□□□□ -0.05
GPNMB-211ENST00000479625 A0A0G2JS52 829 aa14.72□□□□□ -0.05
GPNMB-211ENST00000479625 MYT1Q01538 1121 aa14.72□□□□□ -0.05
GPNMB-211ENST00000479625 TMEM132EQ6IEE7 984 aa14.72□□□□□ -0.05
GPNMB-211ENST00000479625 PIK3C2GO75747 1445 aa14.72□□□□□ -0.05
GPNMB-211ENST00000479625 ADGRB2O60241 1585 aa14.72□□□□□ -0.05
GPNMB-211ENST00000479625 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
GPNMB-211ENST00000479625 BAG6P46379 1132 aa14.71□□□□□ -0.05
GPNMB-211ENST00000479625 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
GPNMB-211ENST00000479625 YTHDC2Q9H6S0 1430 aaKnown RBP14.71□□□□□ -0.05
GPNMB-211ENST00000479625 ABCC11Q96J66 1382 aa14.71□□□□□ -0.06
GPNMB-211ENST00000479625 RREB1Q92766 1687 aa14.71□□□□□ -0.06
GPNMB-211ENST00000479625 SPATA31E1Q6ZUB1 1445 aa14.7□□□□□ -0.06
GPNMB-211ENST00000479625 ONECUT3O60422 494 aaPredicted RBP14.7□□□□□ -0.06
GPNMB-211ENST00000479625 NUP188Q5SRE5 1749 aa14.69□□□□□ -0.06
GPNMB-211ENST00000479625 EN1Q05925 392 aaPredicted RBP14.69□□□□□ -0.06
GPNMB-211ENST00000479625 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
GPNMB-211ENST00000479625 FAM182BQ5T319 152 aa14.69□□□□□ -0.06
GPNMB-211ENST00000479625 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
GPNMB-211ENST00000479625 LMOD2Q6P5Q4 547 aa14.68□□□□□ -0.06
GPNMB-211ENST00000479625 PHF8Q9UPP1 1060 aa14.68□□□□□ -0.06
GPNMB-211ENST00000479625 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
GPNMB-211ENST00000479625 PHRF1Q9P1Y6 1649 aaKnown RBP14.67□□□□□ -0.06
GPNMB-211ENST00000479625 ARHGEF10O15013 1369 aa14.66□□□□□ -0.06
GPNMB-211ENST00000479625 FAM83GA6ND36 823 aa14.66□□□□□ -0.06
GPNMB-211ENST00000479625 RGL3Q3MIN7 710 aa14.66□□□□□ -0.06
GPNMB-211ENST00000479625 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
GPNMB-211ENST00000479625 ANKRD30BQ9BXX2 1392 aa14.64□□□□□ -0.07
GPNMB-211ENST00000479625 PSME1Q06323 249 aa14.64□□□□□ -0.07
GPNMB-211ENST00000479625 BTG4Q9NY30 223 aa14.64□□□□□ -0.07
GPNMB-211ENST00000479625 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
GPNMB-211ENST00000479625 CAMTA1Q9Y6Y1 1673 aa14.62□□□□□ -0.07
GPNMB-211ENST00000479625 SAFB2Q14151 953 aaKnown RBP eCLIP14.62□□□□□ -0.07
GPNMB-211ENST00000479625 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
GPNMB-211ENST00000479625 PMFBP1Q8TBY8 1022 aa14.62□□□□□ -0.07
GPNMB-211ENST00000479625 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
GPNMB-211ENST00000479625 ANKARQ7Z5J8 1434 aa14.6□□□□□ -0.07
GPNMB-211ENST00000479625 DLC1Q96QB1 1528 aa14.6□□□□□ -0.07
GPNMB-211ENST00000479625 SPATA31A5Q5VU36 1347 aa14.6□□□□□ -0.07
GPNMB-211ENST00000479625 SPATA31A7Q8IWB4 1347 aa14.6□□□□□ -0.07
GPNMB-211ENST00000479625 TULP4Q9NRJ4 1543 aa14.58□□□□□ -0.08
GPNMB-211ENST00000479625 PRAM1Q96QH2 718 aa14.58□□□□□ -0.08
GPNMB-211ENST00000479625 ADGRB1O14514 1584 aa14.56□□□□□ -0.08
GPNMB-211ENST00000479625 TRIM37O94972 964 aa14.56□□□□□ -0.08
GPNMB-211ENST00000479625 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
GPNMB-211ENST00000479625 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
GPNMB-211ENST00000479625 SIRT1Q96EB6 747 aa14.56□□□□□ -0.08
GPNMB-211ENST00000479625 CLEC11AQ9Y240 323 aa14.56□□□□□ -0.08
GPNMB-211ENST00000479625 DHX57Q6P158 1386 aaKnown RBP14.56□□□□□ -0.08
GPNMB-211ENST00000479625 YY1P25490 414 aa14.55□□□□□ -0.08
GPNMB-211ENST00000479625 CAMKK2Q96RR4 588 aa14.55□□□□□ -0.08
GPNMB-211ENST00000479625 C14orf93Q9H972 538 aaKnown RBP14.55□□□□□ -0.08
GPNMB-211ENST00000479625 PRR36Q9H6K5 1346 aa14.55□□□□□ -0.08
GPNMB-211ENST00000479625 NRKQ7Z2Y5 1582 aa14.55□□□□□ -0.08
GPNMB-211ENST00000479625 ARHGEF28Q8N1W1 1705 aaKnown RBP14.55□□□□□ -0.08
GPNMB-211ENST00000479625 HIRIP3Q9BW71 556 aaPredicted RBP14.54□□□□□ -0.08
GPNMB-211ENST00000479625 ACIN1Q9UKV3 1341 aaKnown RBP14.54□□□□□ -0.08
GPNMB-211ENST00000479625 TOPAZ1Q8N9V7 1692 aa14.54□□□□□ -0.08
GPNMB-211ENST00000479625 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
GPNMB-211ENST00000479625 GPRASP1Q5JY77 1395 aa14.53□□□□□ -0.08
GPNMB-211ENST00000479625 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
GPNMB-211ENST00000479625 SBF2Q86WG5 1849 aa14.52□□□□□ -0.08
GPNMB-211ENST00000479625 CASZ1Q86V15 1759 aa14.52□□□□□ -0.08
GPNMB-211ENST00000479625 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.08
GPNMB-211ENST00000479625 PARD3Q8TEW0 1356 aa14.52□□□□□ -0.08
GPNMB-211ENST00000479625 KIAA0232Q92628 1395 aa14.52□□□□□ -0.08
GPNMB-211ENST00000479625 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-211ENST00000479625 PRDM11Q9NQV5 511 aa14.52□□□□□ -0.09
GPNMB-211ENST00000479625 RGPD3A6NKT7 1758 aaPredicted RBP14.52□□□□□ -0.09
GPNMB-211ENST00000479625 RGPD4Q7Z3J3 1758 aa14.52□□□□□ -0.09
GPNMB-211ENST00000479625 APBA3O96018 575 aa14.51□□□□□ -0.09
GPNMB-211ENST00000479625 CHRNA2Q15822 529 aa14.51□□□□□ -0.09
GPNMB-211ENST00000479625 POGKQ9P215 609 aa14.51□□□□□ -0.09
GPNMB-211ENST00000479625 ATP7BP35670 1465 aa14.5□□□□□ -0.09
GPNMB-211ENST00000479625 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
GPNMB-211ENST00000479625 PEAK1Q9H792 1746 aa14.5□□□□□ -0.09
GPNMB-211ENST00000479625 MINK1Q8N4C8 1332 aaPredicted RBP14.5□□□□□ -0.09
GPNMB-211ENST00000479625 MYOM1P52179 1685 aa14.5□□□□□ -0.09
GPNMB-211ENST00000479625 MPHOSPH9Q99550 1183 aa14.5□□□□□ -0.09
GPNMB-211ENST00000479625 STRN4Q9NRL3 753 aa14.5□□□□□ -0.09
GPNMB-211ENST00000479625 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
GPNMB-211ENST00000479625 FAM196AQ6ZSG2 479 aa14.49□□□□□ -0.09
GPNMB-211ENST00000479625 UTRNP46939 3433 aa14.49□□□□□ -0.09
GPNMB-211ENST00000479625 SSH2Q76I76 1423 aa14.49□□□□□ -0.09
GPNMB-211ENST00000479625 LRRC37A3O60309 1634 aa14.48□□□□□ -0.09
GPNMB-211ENST00000479625 EIF3AQ14152 1382 aaKnown RBP14.48□□□□□ -0.09
GPNMB-211ENST00000479625 USP35Q9P2H5 1018 aa14.48□□□□□ -0.09
GPNMB-211ENST00000479625 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
GPNMB-211ENST00000479625 TRAK1Q9UPV9 953 aa14.47□□□□□ -0.09
GPNMB-211ENST00000479625 NGDNQ8NEJ9 315 aaKnown RBP14.46□□□□□ -0.09
GPNMB-211ENST00000479625 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
GPNMB-211ENST00000479625 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
GPNMB-211ENST00000479625 PPP1R1BQ9UD71 204 aaPredicted RBP14.45□□□□□ -0.1
GPNMB-211ENST00000479625 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
GPNMB-211ENST00000479625 WASLO00401 505 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms