RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
TM9SF4-206ENST00000479591 KIF1AQ12756 1690 aa16.12■□□□□ 0.17
TM9SF4-206ENST00000479591 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
TM9SF4-206ENST00000479591 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
TM9SF4-206ENST00000479591 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
TM9SF4-206ENST00000479591 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
TM9SF4-206ENST00000479591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
TM9SF4-206ENST00000479591 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
TM9SF4-206ENST00000479591 GGNBP2Q9H3C7 697 aa16.11■□□□□ 0.17
TM9SF4-206ENST00000479591 MST1RQ04912 1400 aa16.11■□□□□ 0.17
TM9SF4-206ENST00000479591 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
TM9SF4-206ENST00000479591 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
TM9SF4-206ENST00000479591 PNISRQ8TF01 805 aaKnown RBP16.09■□□□□ 0.17
TM9SF4-206ENST00000479591 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
TM9SF4-206ENST00000479591 COG3Q96JB2 828 aa16.08■□□□□ 0.16
TM9SF4-206ENST00000479591 NME9Q86XW9 330 aa16.07■□□□□ 0.16
TM9SF4-206ENST00000479591 USP54Q70EL1 1684 aa16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 OVOS2A0A0J9YW53 1432 aa16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 OVOS2Q6IE36 1432 aa16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 INSRP06213 1382 aa16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 TNNT2P45379 298 aaPredicted RBP16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 ORAI2Q96SN7 254 aa16.05■□□□□ 0.16
TM9SF4-206ENST00000479591 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
TM9SF4-206ENST00000479591 PSME1Q06323 249 aa16.04■□□□□ 0.16
TM9SF4-206ENST00000479591 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
TM9SF4-206ENST00000479591 PIK3C2AO00443 1686 aa16.04■□□□□ 0.16
TM9SF4-206ENST00000479591 CENPBP07199 599 aaPredicted RBP16.03■□□□□ 0.16
TM9SF4-206ENST00000479591 MTHFSP49914 203 aa16.03■□□□□ 0.16
TM9SF4-206ENST00000479591 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
TM9SF4-206ENST00000479591 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
TM9SF4-206ENST00000479591 ZRANB1Q9UGI0 708 aa16.01■□□□□ 0.15
TM9SF4-206ENST00000479591 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
TM9SF4-206ENST00000479591 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
TM9SF4-206ENST00000479591 TRPM3Q9HCF6 1732 aaPredicted RBP16■□□□□ 0.15
TM9SF4-206ENST00000479591 FOXO3O43524 673 aa16■□□□□ 0.15
TM9SF4-206ENST00000479591 NPHP3Q7Z494 1330 aa15.99■□□□□ 0.15
TM9SF4-206ENST00000479591 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
TM9SF4-206ENST00000479591 ABTB2Q8N961 1025 aa15.99■□□□□ 0.15
TM9SF4-206ENST00000479591 NLRP6P59044 892 aa15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 HNRNPUQ00839 825 aaKnown RBP eCLIP15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 SLAIN2Q9P270 581 aa15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 MARF1Q9Y4F3 1742 aaKnown RBP15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 SHPRHQ149N8 1683 aa15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 PNPLA6Q8IY17 1366 aa15.98■□□□□ 0.15
TM9SF4-206ENST00000479591 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
TM9SF4-206ENST00000479591 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
TM9SF4-206ENST00000479591 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
TM9SF4-206ENST00000479591 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
TM9SF4-206ENST00000479591 SBNO1A3KN83 1393 aa15.96■□□□□ 0.15
TM9SF4-206ENST00000479591 COL3A1P02461 1466 aaPredicted RBP15.96■□□□□ 0.14
TM9SF4-206ENST00000479591 BRINP3Q76B58 766 aa15.95■□□□□ 0.14
TM9SF4-206ENST00000479591 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
TM9SF4-206ENST00000479591 ALS2Q96Q42 1657 aa15.95■□□□□ 0.14
TM9SF4-206ENST00000479591 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
TM9SF4-206ENST00000479591 PXDNQ92626 1479 aa15.94■□□□□ 0.14
TM9SF4-206ENST00000479591 ZBED9Q6R2W3 1325 aa15.93■□□□□ 0.14
TM9SF4-206ENST00000479591 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
TM9SF4-206ENST00000479591 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
TM9SF4-206ENST00000479591 XPCQ01831 940 aaPredicted RBP15.92■□□□□ 0.14
TM9SF4-206ENST00000479591 KCNH5Q8NCM2 988 aa15.92■□□□□ 0.14
TM9SF4-206ENST00000479591 EMILIN1Q9Y6C2 1016 aa15.92■□□□□ 0.14
TM9SF4-206ENST00000479591 SLIT3O75094 1523 aa15.92■□□□□ 0.14
TM9SF4-206ENST00000479591 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
TM9SF4-206ENST00000479591 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
TM9SF4-206ENST00000479591 FBLN1P23142 703 aa15.91■□□□□ 0.14
TM9SF4-206ENST00000479591 RRS1Q15050 365 aaKnown RBP15.91■□□□□ 0.14
TM9SF4-206ENST00000479591 TNS3Q68CZ2 1445 aa15.91■□□□□ 0.14
TM9SF4-206ENST00000479591 NUTM2GQ5VZR2 741 aa15.9■□□□□ 0.14
TM9SF4-206ENST00000479591 USP19O94966 1318 aa15.9■□□□□ 0.14
TM9SF4-206ENST00000479591 NFAT5O94916 1531 aa15.89■□□□□ 0.13
TM9SF4-206ENST00000479591 ARHGEF10O15013 1369 aa15.89■□□□□ 0.13
TM9SF4-206ENST00000479591 FLT4P35916 1363 aa15.89■□□□□ 0.13
TM9SF4-206ENST00000479591 PEAK1Q9H792 1746 aa15.89■□□□□ 0.13
TM9SF4-206ENST00000479591 SOS2Q07890 1332 aaPredicted RBP15.89■□□□□ 0.13
TM9SF4-206ENST00000479591 MAP3K19Q56UN5 1328 aa15.89■□□□□ 0.13
TM9SF4-206ENST00000479591 PHRF1Q9P1Y6 1649 aaKnown RBP15.88■□□□□ 0.13
TM9SF4-206ENST00000479591 IQSEC2Q5JU85 1478 aa15.88■□□□□ 0.13
TM9SF4-206ENST00000479591 SPATA31A3Q5VYP0 1347 aa15.88■□□□□ 0.13
TM9SF4-206ENST00000479591 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 LTN1O94822 1766 aa15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 SOX12O15370 315 aa15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 LMOD2Q6P5Q4 547 aa15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 DDX17Q92841 729 aaKnown RBP15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 PNNQ9H307 717 aaKnown RBP15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 MED1Q15648 1581 aaPredicted RBP15.87■□□□□ 0.13
TM9SF4-206ENST00000479591 ROBO1Q9Y6N7 1651 aa15.86■□□□□ 0.13
TM9SF4-206ENST00000479591 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
TM9SF4-206ENST00000479591 IL13P35225 146 aa15.86■□□□□ 0.13
TM9SF4-206ENST00000479591 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
TM9SF4-206ENST00000479591 AMPHP49418 695 aa15.85■□□□□ 0.13
TM9SF4-206ENST00000479591 RUNDC1Q96C34 613 aa15.85■□□□□ 0.13
TM9SF4-206ENST00000479591 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
TM9SF4-206ENST00000479591 TOM1O60784 492 aa15.84■□□□□ 0.13
TM9SF4-206ENST00000479591 GCP02774 474 aa15.84■□□□□ 0.13
TM9SF4-206ENST00000479591 CRYBG1Q9Y4K1 1723 aa15.84■□□□□ 0.13
TM9SF4-206ENST00000479591 FCHSD2O94868 740 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms