RNA–Protein interactions for RNA: ENST00000479424.5

ITSN1-228, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 647 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-228ENST00000479424 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
ITSN1-228ENST00000479424 THSD7AQ9UPZ6 1657 aa12.64□□□□□ -0.39
ITSN1-228ENST00000479424 PHRF1Q9P1Y6 1649 aaKnown RBP12.63□□□□□ -0.39
ITSN1-228ENST00000479424 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
ITSN1-228ENST00000479424 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
ITSN1-228ENST00000479424 FAM98CQ17RN3 349 aaKnown RBP12.62□□□□□ -0.39
ITSN1-228ENST00000479424 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
ITSN1-228ENST00000479424 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
ITSN1-228ENST00000479424 HRCP23327 699 aa12.61□□□□□ -0.39
ITSN1-228ENST00000479424 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
ITSN1-228ENST00000479424 TNS1Q9HBL0 1735 aaKnown RBP12.61□□□□□ -0.39
ITSN1-228ENST00000479424 SPATA31A5Q5VU36 1347 aa12.61□□□□□ -0.39
ITSN1-228ENST00000479424 SPATA31A7Q8IWB4 1347 aa12.61□□□□□ -0.39
ITSN1-228ENST00000479424 LRP5O75197 1615 aa12.6□□□□□ -0.39
ITSN1-228ENST00000479424 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
ITSN1-228ENST00000479424 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
ITSN1-228ENST00000479424 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
ITSN1-228ENST00000479424 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
ITSN1-228ENST00000479424 SF3B2Q13435 895 aaKnown RBP12.58□□□□□ -0.4
ITSN1-228ENST00000479424 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
ITSN1-228ENST00000479424 POLR3AO14802 1390 aaPredicted RBP12.57□□□□□ -0.4
ITSN1-228ENST00000479424 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
ITSN1-228ENST00000479424 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 A0A0G2JS52 829 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 MYT1Q01538 1121 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 LMO7Q8WWI1 1683 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
ITSN1-228ENST00000479424 BAG6P46379 1132 aa12.55□□□□□ -0.4
ITSN1-228ENST00000479424 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-228ENST00000479424 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
ITSN1-228ENST00000479424 ACEP12821 1306 aa12.55□□□□□ -0.4
ITSN1-228ENST00000479424 CAMTA1Q9Y6Y1 1673 aa12.54□□□□□ -0.4
ITSN1-228ENST00000479424 DISP2A7MBM2 1401 aa12.54□□□□□ -0.4
ITSN1-228ENST00000479424 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
ITSN1-228ENST00000479424 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
ITSN1-228ENST00000479424 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
ITSN1-228ENST00000479424 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
ITSN1-228ENST00000479424 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
ITSN1-228ENST00000479424 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
ITSN1-228ENST00000479424 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
ITSN1-228ENST00000479424 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
ITSN1-228ENST00000479424 USP19O94966 1318 aa12.51□□□□□ -0.41
ITSN1-228ENST00000479424 SSH2Q76I76 1423 aa12.51□□□□□ -0.41
ITSN1-228ENST00000479424 RREB1Q92766 1687 aa12.51□□□□□ -0.41
ITSN1-228ENST00000479424 EZH2Q15910 746 aaKnown RBP12.5□□□□□ -0.41
ITSN1-228ENST00000479424 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
ITSN1-228ENST00000479424 CAMKK2Q96RR4 588 aa12.5□□□□□ -0.41
ITSN1-228ENST00000479424 CPDO75976 1380 aa12.5□□□□□ -0.41
ITSN1-228ENST00000479424 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
ITSN1-228ENST00000479424 SBF2Q86WG5 1849 aa12.49□□□□□ -0.41
ITSN1-228ENST00000479424 COL18A1P39060 1754 aa12.49□□□□□ -0.41
ITSN1-228ENST00000479424 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
ITSN1-228ENST00000479424 PPIP5K1Q6PFW1 1433 aa12.49□□□□□ -0.41
ITSN1-228ENST00000479424 TRIM37O94972 964 aa12.49□□□□□ -0.41
ITSN1-228ENST00000479424 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
ITSN1-228ENST00000479424 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
ITSN1-228ENST00000479424 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
ITSN1-228ENST00000479424 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
ITSN1-228ENST00000479424 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
ITSN1-228ENST00000479424 RGPD5Q99666 1765 aa12.48□□□□□ -0.41
ITSN1-228ENST00000479424 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
ITSN1-228ENST00000479424 CENPJQ9HC77 1338 aaPredicted RBP12.47□□□□□ -0.41
ITSN1-228ENST00000479424 R3HDM1Q15032 1099 aaKnown RBP12.47□□□□□ -0.41
ITSN1-228ENST00000479424 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
ITSN1-228ENST00000479424 PIK3C2AO00443 1686 aa12.47□□□□□ -0.41
ITSN1-228ENST00000479424 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.41
ITSN1-228ENST00000479424 GCP02774 474 aa12.46□□□□□ -0.41
ITSN1-228ENST00000479424 EVA1CP58658 441 aa12.46□□□□□ -0.41
ITSN1-228ENST00000479424 TRPM1Q7Z4N2 1603 aa12.46□□□□□ -0.41
ITSN1-228ENST00000479424 SLIT3O75094 1523 aa12.46□□□□□ -0.42
ITSN1-228ENST00000479424 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
ITSN1-228ENST00000479424 SRPK2P78362 688 aaKnown RBP12.45□□□□□ -0.42
ITSN1-228ENST00000479424 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
ITSN1-228ENST00000479424 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
ITSN1-228ENST00000479424 USP6P35125 1406 aa12.45□□□□□ -0.42
ITSN1-228ENST00000479424 APBA3O96018 575 aa12.44□□□□□ -0.42
ITSN1-228ENST00000479424 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
ITSN1-228ENST00000479424 LRRC37A3O60309 1634 aa12.44□□□□□ -0.42
ITSN1-228ENST00000479424 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
ITSN1-228ENST00000479424 L3MBTL2Q969R5 705 aa12.43□□□□□ -0.42
ITSN1-228ENST00000479424 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
ITSN1-228ENST00000479424 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
ITSN1-228ENST00000479424 PDE3BQ13370 1112 aa12.42□□□□□ -0.42
ITSN1-228ENST00000479424 CRB1P82279 1406 aa12.42□□□□□ -0.42
ITSN1-228ENST00000479424 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
ITSN1-228ENST00000479424 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
ITSN1-228ENST00000479424 AATKQ6ZMQ8 1374 aa12.41□□□□□ -0.42
ITSN1-228ENST00000479424 NLRP6P59044 892 aa12.4□□□□□ -0.42
ITSN1-228ENST00000479424 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
ITSN1-228ENST00000479424 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
ITSN1-228ENST00000479424 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
ITSN1-228ENST00000479424 PTF1AQ7RTS3 328 aa12.38□□□□□ -0.43
ITSN1-228ENST00000479424 UTRNP46939 3433 aa12.38□□□□□ -0.43
ITSN1-228ENST00000479424 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
ITSN1-228ENST00000479424 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
ITSN1-228ENST00000479424 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
ITSN1-228ENST00000479424 ARHGEF25Q86VW2 580 aa12.37□□□□□ -0.43
ITSN1-228ENST00000479424 NFAT5O94916 1531 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms