RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 PXDNQ92626 1479 aa12.96□□□□□ -0.34
CMTM1-208ENST00000479381 ANKARQ7Z5J8 1434 aa12.96□□□□□ -0.34
CMTM1-208ENST00000479381 TULP4Q9NRJ4 1543 aa12.95□□□□□ -0.34
CMTM1-208ENST00000479381 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
CMTM1-208ENST00000479381 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
CMTM1-208ENST00000479381 USP21Q9UK80 565 aa12.94□□□□□ -0.34
CMTM1-208ENST00000479381 TNS3Q68CZ2 1445 aa12.94□□□□□ -0.34
CMTM1-208ENST00000479381 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
CMTM1-208ENST00000479381 PCGF6Q9BYE7 350 aa12.93□□□□□ -0.34
CMTM1-208ENST00000479381 QTRT2Q9H974 415 aaKnown RBP12.93□□□□□ -0.34
CMTM1-208ENST00000479381 SPATA31A3Q5VYP0 1347 aa12.92□□□□□ -0.34
CMTM1-208ENST00000479381 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
CMTM1-208ENST00000479381 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
CMTM1-208ENST00000479381 ARHGEF10O15013 1369 aa12.92□□□□□ -0.34
CMTM1-208ENST00000479381 USP32Q8NFA0 1604 aa12.91□□□□□ -0.34
CMTM1-208ENST00000479381 COL22A1Q8NFW1 1626 aaPredicted RBP12.91□□□□□ -0.34
CMTM1-208ENST00000479381 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
CMTM1-208ENST00000479381 TRPM1Q7Z4N2 1603 aa12.91□□□□□ -0.34
CMTM1-208ENST00000479381 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
CMTM1-208ENST00000479381 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
CMTM1-208ENST00000479381 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
CMTM1-208ENST00000479381 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
CMTM1-208ENST00000479381 A0A0G2JS52 829 aa12.89□□□□□ -0.35
CMTM1-208ENST00000479381 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
CMTM1-208ENST00000479381 MYT1Q01538 1121 aa12.89□□□□□ -0.35
CMTM1-208ENST00000479381 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
CMTM1-208ENST00000479381 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
CMTM1-208ENST00000479381 SBNO1A3KN83 1393 aa12.89□□□□□ -0.35
CMTM1-208ENST00000479381 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
CMTM1-208ENST00000479381 ATP7BP35670 1465 aa12.87□□□□□ -0.35
CMTM1-208ENST00000479381 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
CMTM1-208ENST00000479381 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
CMTM1-208ENST00000479381 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
CMTM1-208ENST00000479381 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
CMTM1-208ENST00000479381 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
CMTM1-208ENST00000479381 ACEP12821 1306 aa12.85□□□□□ -0.35
CMTM1-208ENST00000479381 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
CMTM1-208ENST00000479381 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-208ENST00000479381 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
CMTM1-208ENST00000479381 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
CMTM1-208ENST00000479381 PRDM11Q9NQV5 511 aa12.83□□□□□ -0.36
CMTM1-208ENST00000479381 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.36
CMTM1-208ENST00000479381 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
CMTM1-208ENST00000479381 RGS12O14924 1447 aa12.82□□□□□ -0.36
CMTM1-208ENST00000479381 UNC5CLQ8IV45 518 aa12.82□□□□□ -0.36
CMTM1-208ENST00000479381 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
CMTM1-208ENST00000479381 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
CMTM1-208ENST00000479381 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
CMTM1-208ENST00000479381 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
CMTM1-208ENST00000479381 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
CMTM1-208ENST00000479381 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
CMTM1-208ENST00000479381 ATRNO75882 1429 aa12.8□□□□□ -0.36
CMTM1-208ENST00000479381 ALS2Q96Q42 1657 aa12.8□□□□□ -0.36
CMTM1-208ENST00000479381 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
CMTM1-208ENST00000479381 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
CMTM1-208ENST00000479381 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
CMTM1-208ENST00000479381 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
CMTM1-208ENST00000479381 ZC3H6P61129 1189 aaKnown RBP12.79□□□□□ -0.36
CMTM1-208ENST00000479381 STRN4Q9NRL3 753 aa12.79□□□□□ -0.36
CMTM1-208ENST00000479381 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
CMTM1-208ENST00000479381 SOX12O15370 315 aa12.78□□□□□ -0.36
CMTM1-208ENST00000479381 EVA1CP58658 441 aa12.78□□□□□ -0.36
CMTM1-208ENST00000479381 NLRP13Q86W25 1043 aa12.78□□□□□ -0.36
CMTM1-208ENST00000479381 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.78□□□□□ -0.36
CMTM1-208ENST00000479381 POLR3AO14802 1390 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-208ENST00000479381 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
CMTM1-208ENST00000479381 BCL9LQ86UU0 1499 aa12.78□□□□□ -0.36
CMTM1-208ENST00000479381 NWD2Q9ULI1 1742 aa12.77□□□□□ -0.36
CMTM1-208ENST00000479381 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
CMTM1-208ENST00000479381 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
CMTM1-208ENST00000479381 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
CMTM1-208ENST00000479381 SLIT2O94813 1529 aa12.77□□□□□ -0.37
CMTM1-208ENST00000479381 PHRF1Q9P1Y6 1649 aaKnown RBP12.77□□□□□ -0.37
CMTM1-208ENST00000479381 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
CMTM1-208ENST00000479381 NLRP6P59044 892 aa12.76□□□□□ -0.37
CMTM1-208ENST00000479381 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
CMTM1-208ENST00000479381 VPS72Q15906 364 aa12.75□□□□□ -0.37
CMTM1-208ENST00000479381 HDGFL2Q7Z4V5 671 aaPredicted RBP12.75□□□□□ -0.37
CMTM1-208ENST00000479381 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
CMTM1-208ENST00000479381 USP35Q9P2H5 1018 aa12.75□□□□□ -0.37
CMTM1-208ENST00000479381 USP6P35125 1406 aa12.74□□□□□ -0.37
CMTM1-208ENST00000479381 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
CMTM1-208ENST00000479381 SF3B2Q13435 895 aaKnown RBP12.74□□□□□ -0.37
CMTM1-208ENST00000479381 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
CMTM1-208ENST00000479381 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
CMTM1-208ENST00000479381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
CMTM1-208ENST00000479381 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
CMTM1-208ENST00000479381 CLEC11AQ9Y240 323 aa12.73□□□□□ -0.37
CMTM1-208ENST00000479381 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-208ENST00000479381 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
CMTM1-208ENST00000479381 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
CMTM1-208ENST00000479381 GLI3P10071 1580 aa12.72□□□□□ -0.37
CMTM1-208ENST00000479381 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
CMTM1-208ENST00000479381 PITPNM1O00562 1244 aa12.71□□□□□ -0.37
CMTM1-208ENST00000479381 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
CMTM1-208ENST00000479381 NRKQ7Z2Y5 1582 aa12.71□□□□□ -0.37
CMTM1-208ENST00000479381 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
CMTM1-208ENST00000479381 NRAPQ86VF7 1730 aa12.71□□□□□ -0.38
CMTM1-208ENST00000479381 USP47Q96K76 1375 aa12.7□□□□□ -0.38
CMTM1-208ENST00000479381 SBNO2Q9Y2G9 1366 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms