RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 AMHR2Q16671 573 aa8.81□□□□□ -1
RC3H1-204ENST00000479099 TOR4AQ9NXH8 423 aa8.81□□□□□ -1
RC3H1-204ENST00000479099 PDE4CQ08493 712 aa8.8□□□□□ -1
RC3H1-204ENST00000479099 TRIM32Q13049 653 aa8.8□□□□□ -1
RC3H1-204ENST00000479099 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
RC3H1-204ENST00000479099 CYP4X1Q8N118 509 aa8.8□□□□□ -1
RC3H1-204ENST00000479099 JUNDP17535 347 aa8.79□□□□□ -1
RC3H1-204ENST00000479099 DHX37Q8IY37 1157 aaKnown RBP8.79□□□□□ -1
RC3H1-204ENST00000479099 WNT7AO00755 349 aa8.78□□□□□ -1
RC3H1-204ENST00000479099 FDX1P10109 184 aa8.78□□□□□ -1
RC3H1-204ENST00000479099 RETREG3Q86VR2 466 aa8.78□□□□□ -1
RC3H1-204ENST00000479099 CCDC125Q86Z20 511 aa8.78□□□□□ -1
RC3H1-204ENST00000479099 CCDC24Q8N4L8 307 aa8.78□□□□□ -1
RC3H1-204ENST00000479099 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
RC3H1-204ENST00000479099 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
RC3H1-204ENST00000479099 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
RC3H1-204ENST00000479099 AAASQ9NRG9 546 aa8.77□□□□□ -1.01
RC3H1-204ENST00000479099 AVPP01185 164 aa8.76□□□□□ -1.01
RC3H1-204ENST00000479099 KCNA1Q09470 495 aa8.76□□□□□ -1.01
RC3H1-204ENST00000479099 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
RC3H1-204ENST00000479099 CRIPAKQ8N1N5 446 aa8.76□□□□□ -1.01
RC3H1-204ENST00000479099 POLR3GLQ9BT43 218 aa8.76□□□□□ -1.01
RC3H1-204ENST00000479099 TTC24A2A3L6 582 aaPredicted RBP8.75□□□□□ -1.01
RC3H1-204ENST00000479099 ST8SIA5O15466 376 aa8.75□□□□□ -1.01
RC3H1-204ENST00000479099 PCDHGC3Q9UN70 934 aa8.75□□□□□ -1.01
RC3H1-204ENST00000479099 C6orf229H3BNL8 230 aa8.74□□□□□ -1.01
RC3H1-204ENST00000479099 SNIP1Q8TAD8 396 aaKnown RBP8.74□□□□□ -1.01
RC3H1-204ENST00000479099 IGSF5Q9NSI5 407 aa8.74□□□□□ -1.01
RC3H1-204ENST00000479099 WNT7BP56706 349 aa8.73□□□□□ -1.01
RC3H1-204ENST00000479099 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
RC3H1-204ENST00000479099 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
RC3H1-204ENST00000479099 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
RC3H1-204ENST00000479099 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
RC3H1-204ENST00000479099 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
RC3H1-204ENST00000479099 NDUFV2P19404 249 aa8.72□□□□□ -1.01
RC3H1-204ENST00000479099 BEGAINQ9BUH8 593 aa8.72□□□□□ -1.01
RC3H1-204ENST00000479099 POTECB2RU33 542 aa8.71□□□□□ -1.02
RC3H1-204ENST00000479099 AXIN1O15169 862 aa8.71□□□□□ -1.02
RC3H1-204ENST00000479099 BRD1O95696 1058 aa8.71□□□□□ -1.02
RC3H1-204ENST00000479099 CANXP27824 592 aaKnown RBP8.71□□□□□ -1.02
RC3H1-204ENST00000479099 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
RC3H1-204ENST00000479099 PARP9Q8IXQ6 854 aa8.71□□□□□ -1.02
RC3H1-204ENST00000479099 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
RC3H1-204ENST00000479099 PCMTD1Q96MG8 357 aaPredicted RBP8.71□□□□□ -1.02
RC3H1-204ENST00000479099 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
RC3H1-204ENST00000479099 MS4A1P11836 297 aa8.7□□□□□ -1.02
RC3H1-204ENST00000479099 SMPD1P17405 629 aa8.7□□□□□ -1.02
RC3H1-204ENST00000479099 SKOR1P84550 965 aa8.7□□□□□ -1.02
RC3H1-204ENST00000479099 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
RC3H1-204ENST00000479099 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
RC3H1-204ENST00000479099 RC3H1Q5TC82 1133 aaKnown RBP8.7□□□□□ -1.02
RC3H1-204ENST00000479099 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
RC3H1-204ENST00000479099 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
RC3H1-204ENST00000479099 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
RC3H1-204ENST00000479099 CCNYL3P0C7X3 344 aa8.69□□□□□ -1.02
RC3H1-204ENST00000479099 GJA5P36382 358 aa8.69□□□□□ -1.02
RC3H1-204ENST00000479099 MTMR2Q13614 643 aa8.69□□□□□ -1.02
RC3H1-204ENST00000479099 PTPRNQ16849 979 aa8.68□□□□□ -1.02
RC3H1-204ENST00000479099 PTCRAQ6ISU1 281 aaPredicted RBP8.68□□□□□ -1.02
RC3H1-204ENST00000479099 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
RC3H1-204ENST00000479099 J3QL48 77 aa8.67□□□□□ -1.02
RC3H1-204ENST00000479099 DESI1Q6ICB0 168 aa8.67□□□□□ -1.02
RC3H1-204ENST00000479099 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
RC3H1-204ENST00000479099 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
RC3H1-204ENST00000479099 UNCXA6NJT0 531 aa8.66□□□□□ -1.02
RC3H1-204ENST00000479099 RSBN1LQ6PCB5 846 aaPredicted RBP8.66□□□□□ -1.02
RC3H1-204ENST00000479099 EVA1BQ9NVM1 165 aa8.65□□□□□ -1.02
RC3H1-204ENST00000479099 GMPR2Q9P2T1 348 aaKnown RBP8.64□□□□□ -1.03
RC3H1-204ENST00000479099 SPTLC1O15269 473 aa8.63□□□□□ -1.03
RC3H1-204ENST00000479099 KCNH2Q12809 1159 aa8.63□□□□□ -1.03
RC3H1-204ENST00000479099 SND1Q7KZF4 910 aaKnown RBP eCLIP8.63□□□□□ -1.03
RC3H1-204ENST00000479099 EHBP1Q8NDI1 1231 aa8.63□□□□□ -1.03
RC3H1-204ENST00000479099 UNC93B1Q9H1C4 597 aa8.63□□□□□ -1.03
RC3H1-204ENST00000479099 SH3BP2P78314 561 aa8.62□□□□□ -1.03
RC3H1-204ENST00000479099 HPS1Q92902 700 aa8.62□□□□□ -1.03
RC3H1-204ENST00000479099 CWC22Q9HCG8 908 aaKnown RBP8.62□□□□□ -1.03
RC3H1-204ENST00000479099 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
RC3H1-204ENST00000479099 SIAH2O43255 324 aa8.61□□□□□ -1.03
RC3H1-204ENST00000479099 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
RC3H1-204ENST00000479099 PRPF38BQ5VTL8 546 aaKnown RBP8.61□□□□□ -1.03
RC3H1-204ENST00000479099 RIC3Q7Z5B4 369 aa8.61□□□□□ -1.03
RC3H1-204ENST00000479099 FAM9AQ8IZU1 332 aaPredicted RBP8.61□□□□□ -1.03
RC3H1-204ENST00000479099 ZBTB3Q9H5J0 574 aa8.61□□□□□ -1.03
RC3H1-204ENST00000479099 USTQ9Y2C2 406 aa8.61□□□□□ -1.03
RC3H1-204ENST00000479099 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
RC3H1-204ENST00000479099 RBM47A0AV96 593 aaKnown RBP8.6□□□□□ -1.03
RC3H1-204ENST00000479099 ATP13A2Q9NQ11 1180 aa8.6□□□□□ -1.03
RC3H1-204ENST00000479099 COG6Q9Y2V7 657 aa8.6□□□□□ -1.03
RC3H1-204ENST00000479099 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
RC3H1-204ENST00000479099 CFAP99D6REC4 459 aa8.59□□□□□ -1.03
RC3H1-204ENST00000479099 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
RC3H1-204ENST00000479099 BAP1Q92560 729 aa8.59□□□□□ -1.03
RC3H1-204ENST00000479099 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
RC3H1-204ENST00000479099 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
RC3H1-204ENST00000479099 ZNF511Q8NB15 262 aa8.58□□□□□ -1.04
RC3H1-204ENST00000479099 CTHP32929 405 aa8.57□□□□□ -1.04
RC3H1-204ENST00000479099 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
RC3H1-204ENST00000479099 SENP2Q9HC62 589 aa8.57□□□□□ -1.04
RC3H1-204ENST00000479099 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
RC3H1-204ENST00000479099 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms