RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
SMARCAL1-211ENST00000479008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCAL1-211ENST00000479008 PXDNQ92626 1479 aa18.68■□□□□ 0.58
SMARCAL1-211ENST00000479008 TTC21BQ7Z4L5 1316 aa18.68■□□□□ 0.58
SMARCAL1-211ENST00000479008 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-211ENST00000479008 DIEXFQ68CQ4 756 aaKnown RBP18.67■□□□□ 0.58
SMARCAL1-211ENST00000479008 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
SMARCAL1-211ENST00000479008 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
SMARCAL1-211ENST00000479008 PHLPP1O60346 1717 aa18.66■□□□□ 0.58
SMARCAL1-211ENST00000479008 CGNL1Q0VF96 1302 aa18.66■□□□□ 0.58
SMARCAL1-211ENST00000479008 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-211ENST00000479008 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-211ENST00000479008 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-211ENST00000479008 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
SMARCAL1-211ENST00000479008 TTC21AQ8NDW8 1320 aa18.65■□□□□ 0.58
SMARCAL1-211ENST00000479008 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
SMARCAL1-211ENST00000479008 NME9Q86XW9 330 aa18.63■□□□□ 0.57
SMARCAL1-211ENST00000479008 SOS2Q07890 1332 aaPredicted RBP18.63■□□□□ 0.57
SMARCAL1-211ENST00000479008 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
SMARCAL1-211ENST00000479008 FYB1O15117 783 aa18.62■□□□□ 0.57
SMARCAL1-211ENST00000479008 GGNBP2Q9H3C7 697 aa18.62■□□□□ 0.57
SMARCAL1-211ENST00000479008 NSD2O96028 1365 aa18.62■□□□□ 0.57
SMARCAL1-211ENST00000479008 NPC1L1Q9UHC9 1359 aa18.62■□□□□ 0.57
SMARCAL1-211ENST00000479008 USP54Q70EL1 1684 aa18.62■□□□□ 0.57
SMARCAL1-211ENST00000479008 MARF1Q9Y4F3 1742 aaKnown RBP18.62■□□□□ 0.57
SMARCAL1-211ENST00000479008 COL16A1Q07092 1604 aaPredicted RBP18.61■□□□□ 0.57
SMARCAL1-211ENST00000479008 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
SMARCAL1-211ENST00000479008 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
SMARCAL1-211ENST00000479008 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
SMARCAL1-211ENST00000479008 SPATA31A3Q5VYP0 1347 aa18.59■□□□□ 0.57
SMARCAL1-211ENST00000479008 LMOD2Q6P5Q4 547 aa18.59■□□□□ 0.57
SMARCAL1-211ENST00000479008 ANP32CO43423 234 aa18.58■□□□□ 0.56
SMARCAL1-211ENST00000479008 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.56
SMARCAL1-211ENST00000479008 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
SMARCAL1-211ENST00000479008 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
SMARCAL1-211ENST00000479008 USP31Q70CQ4 1352 aa18.57■□□□□ 0.56
SMARCAL1-211ENST00000479008 NLRP6P59044 892 aa18.57■□□□□ 0.56
SMARCAL1-211ENST00000479008 COG3Q96JB2 828 aa18.57■□□□□ 0.56
SMARCAL1-211ENST00000479008 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
SMARCAL1-211ENST00000479008 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
SMARCAL1-211ENST00000479008 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
SMARCAL1-211ENST00000479008 PHRF1Q9P1Y6 1649 aaKnown RBP18.55■□□□□ 0.56
SMARCAL1-211ENST00000479008 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
SMARCAL1-211ENST00000479008 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
SMARCAL1-211ENST00000479008 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
SMARCAL1-211ENST00000479008 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
SMARCAL1-211ENST00000479008 MAP2P11137 1827 aaKnown RBP18.53■□□□□ 0.56
SMARCAL1-211ENST00000479008 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
SMARCAL1-211ENST00000479008 RALBP1Q15311 655 aa18.53■□□□□ 0.56
SMARCAL1-211ENST00000479008 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
SMARCAL1-211ENST00000479008 ABCA3Q99758 1704 aa18.53■□□□□ 0.56
SMARCAL1-211ENST00000479008 SLIT3O75094 1523 aa18.52■□□□□ 0.56
SMARCAL1-211ENST00000479008 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.55
SMARCAL1-211ENST00000479008 TNNT2P45379 298 aaPredicted RBP18.51■□□□□ 0.55
SMARCAL1-211ENST00000479008 SHPRHQ149N8 1683 aa18.5■□□□□ 0.55
SMARCAL1-211ENST00000479008 USP19O94966 1318 aa18.5■□□□□ 0.55
SMARCAL1-211ENST00000479008 SOX12O15370 315 aa18.5■□□□□ 0.55
SMARCAL1-211ENST00000479008 PNPLA6Q8IY17 1366 aa18.5■□□□□ 0.55
SMARCAL1-211ENST00000479008 LTN1O94822 1766 aa18.5■□□□□ 0.55
SMARCAL1-211ENST00000479008 HSPA1LP34931 641 aa18.48■□□□□ 0.55
SMARCAL1-211ENST00000479008 NFAT5O94916 1531 aa18.48■□□□□ 0.55
SMARCAL1-211ENST00000479008 FBLN1P23142 703 aa18.47■□□□□ 0.55
SMARCAL1-211ENST00000479008 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
SMARCAL1-211ENST00000479008 MIER1Q8N108 512 aa18.47■□□□□ 0.55
SMARCAL1-211ENST00000479008 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
SMARCAL1-211ENST00000479008 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
SMARCAL1-211ENST00000479008 KCNH5Q8NCM2 988 aa18.46■□□□□ 0.55
SMARCAL1-211ENST00000479008 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
SMARCAL1-211ENST00000479008 JCADQ9P266 1359 aa18.44■□□□□ 0.54
SMARCAL1-211ENST00000479008 GCP02774 474 aa18.44■□□□□ 0.54
SMARCAL1-211ENST00000479008 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
SMARCAL1-211ENST00000479008 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
SMARCAL1-211ENST00000479008 PEAK1Q9H792 1746 aa18.43■□□□□ 0.54
SMARCAL1-211ENST00000479008 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
SMARCAL1-211ENST00000479008 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
SMARCAL1-211ENST00000479008 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
SMARCAL1-211ENST00000479008 EMILIN1Q9Y6C2 1016 aa18.41■□□□□ 0.54
SMARCAL1-211ENST00000479008 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
SMARCAL1-211ENST00000479008 MTHFSP49914 203 aa18.4■□□□□ 0.54
SMARCAL1-211ENST00000479008 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
SMARCAL1-211ENST00000479008 MAP3K19Q56UN5 1328 aa18.4■□□□□ 0.54
SMARCAL1-211ENST00000479008 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
SMARCAL1-211ENST00000479008 PPM1GO15355 546 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-211ENST00000479008 COL18A1P39060 1754 aa18.38■□□□□ 0.53
SMARCAL1-211ENST00000479008 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
SMARCAL1-211ENST00000479008 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
SMARCAL1-211ENST00000479008 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
SMARCAL1-211ENST00000479008 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
SMARCAL1-211ENST00000479008 AMPHP49418 695 aa18.37■□□□□ 0.53
SMARCAL1-211ENST00000479008 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
SMARCAL1-211ENST00000479008 CPDO75976 1380 aa18.37■□□□□ 0.53
SMARCAL1-211ENST00000479008 KIAA0232Q92628 1395 aa18.37■□□□□ 0.53
SMARCAL1-211ENST00000479008 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
SMARCAL1-211ENST00000479008 FLT4P35916 1363 aa18.36■□□□□ 0.53
SMARCAL1-211ENST00000479008 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
SMARCAL1-211ENST00000479008 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
SMARCAL1-211ENST00000479008 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
SMARCAL1-211ENST00000479008 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
SMARCAL1-211ENST00000479008 CFAP53Q96M91 514 aa18.35■□□□□ 0.53
SMARCAL1-211ENST00000479008 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms