RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 PDE3AQ14432 1141 aa17.92■□□□□ 0.46
CCDC78-210ENST00000478979 BECN1Q14457 450 aa17.92■□□□□ 0.46
CCDC78-210ENST00000478979 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
CCDC78-210ENST00000478979 XRCC6P12956 609 aaKnown RBP eCLIP17.91■□□□□ 0.46
CCDC78-210ENST00000478979 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
CCDC78-210ENST00000478979 PIK3C2BO00750 1634 aa17.91■□□□□ 0.46
CCDC78-210ENST00000478979 HSP90AA1P07900 732 aaKnown RBP17.91■□□□□ 0.46
CCDC78-210ENST00000478979 NEO1Q92859 1461 aa17.91■□□□□ 0.46
CCDC78-210ENST00000478979 HMOX1P09601 288 aa17.9■□□□□ 0.46
CCDC78-210ENST00000478979 CLCN1P35523 988 aa17.9■□□□□ 0.46
CCDC78-210ENST00000478979 VIRMAQ69YN4 1812 aaKnown RBP17.9■□□□□ 0.46
CCDC78-210ENST00000478979 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
CCDC78-210ENST00000478979 RIPK4P57078 832 aa17.9■□□□□ 0.46
CCDC78-210ENST00000478979 MYH16Q9H6N6 1097 aa17.9■□□□□ 0.46
CCDC78-210ENST00000478979 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
CCDC78-210ENST00000478979 RRP9O43818 475 aaKnown RBP17.89■□□□□ 0.45
CCDC78-210ENST00000478979 WDR63Q8IWG1 891 aa17.89■□□□□ 0.45
CCDC78-210ENST00000478979 TMPOP42166 694 aaKnown RBP17.89■□□□□ 0.45
CCDC78-210ENST00000478979 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
CCDC78-210ENST00000478979 PANK2Q9BZ23 570 aa17.88■□□□□ 0.45
CCDC78-210ENST00000478979 GOLGA6L3A6NEY3 463 aa17.88■□□□□ 0.45
CCDC78-210ENST00000478979 NGEFQ8N5V2 710 aa17.88■□□□□ 0.45
CCDC78-210ENST00000478979 THUMPD2Q9BTF0 503 aaKnown RBP17.88■□□□□ 0.45
CCDC78-210ENST00000478979 ZRANB1Q9UGI0 708 aa17.88■□□□□ 0.45
CCDC78-210ENST00000478979 YTHDC2Q9H6S0 1430 aaKnown RBP17.87■□□□□ 0.45
CCDC78-210ENST00000478979 ITPRIPQ8IWB1 547 aa17.87■□□□□ 0.45
CCDC78-210ENST00000478979 ANTXR1Q9H6X2 564 aa17.87■□□□□ 0.45
CCDC78-210ENST00000478979 ELL2O00472 640 aaPredicted RBP17.86■□□□□ 0.45
CCDC78-210ENST00000478979 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
CCDC78-210ENST00000478979 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
CCDC78-210ENST00000478979 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 RICTORQ6R327 1708 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 TXNDC2Q86VQ3 553 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
CCDC78-210ENST00000478979 PDZRN3Q9UPQ7 1066 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 FSD2A1L4K1 749 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 SSH1Q8WYL5 1049 aa17.85■□□□□ 0.45
CCDC78-210ENST00000478979 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
CCDC78-210ENST00000478979 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
CCDC78-210ENST00000478979 SOX12O15370 315 aa17.83■□□□□ 0.45
CCDC78-210ENST00000478979 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
CCDC78-210ENST00000478979 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.44
CCDC78-210ENST00000478979 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.44
CCDC78-210ENST00000478979 EMILIN1Q9Y6C2 1016 aa17.83■□□□□ 0.44
CCDC78-210ENST00000478979 PTPRMP28827 1452 aa17.83■□□□□ 0.44
CCDC78-210ENST00000478979 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
CCDC78-210ENST00000478979 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
CCDC78-210ENST00000478979 TRIM27P14373 513 aa17.82■□□□□ 0.44
CCDC78-210ENST00000478979 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
CCDC78-210ENST00000478979 ATAD2Q6PL18 1390 aa17.82■□□□□ 0.44
CCDC78-210ENST00000478979 PREX1Q8TCU6 1659 aa17.81■□□□□ 0.44
CCDC78-210ENST00000478979 NME9Q86XW9 330 aa17.81■□□□□ 0.44
CCDC78-210ENST00000478979 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
CCDC78-210ENST00000478979 NSD2O96028 1365 aa17.81■□□□□ 0.44
CCDC78-210ENST00000478979 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
CCDC78-210ENST00000478979 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
CCDC78-210ENST00000478979 PMFBP1Q8TBY8 1022 aa17.8■□□□□ 0.44
CCDC78-210ENST00000478979 CCDC27Q2M243 656 aa17.8■□□□□ 0.44
CCDC78-210ENST00000478979 ARHGAP31Q2M1Z3 1444 aa17.8■□□□□ 0.44
CCDC78-210ENST00000478979 TMEM131LA2VDJ0 1609 aa17.8■□□□□ 0.44
CCDC78-210ENST00000478979 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
CCDC78-210ENST00000478979 TBC1D2Q9BYX2 928 aa17.78■□□□□ 0.44
CCDC78-210ENST00000478979 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-210ENST00000478979 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
CCDC78-210ENST00000478979 MCM4P33991 863 aa17.78■□□□□ 0.44
CCDC78-210ENST00000478979 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
CCDC78-210ENST00000478979 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
CCDC78-210ENST00000478979 ALKQ9UM73 1620 aa17.77■□□□□ 0.44
CCDC78-210ENST00000478979 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.43
CCDC78-210ENST00000478979 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
CCDC78-210ENST00000478979 C1orf115Q9H7X2 142 aa17.75■□□□□ 0.43
CCDC78-210ENST00000478979 USP32Q8NFA0 1604 aa17.75■□□□□ 0.43
CCDC78-210ENST00000478979 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
CCDC78-210ENST00000478979 DCTN1Q14203 1278 aa17.74■□□□□ 0.43
CCDC78-210ENST00000478979 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
CCDC78-210ENST00000478979 UPF2Q9HAU5 1272 aaKnown RBP17.74■□□□□ 0.43
CCDC78-210ENST00000478979 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
CCDC78-210ENST00000478979 MRE11P49959 708 aa17.73■□□□□ 0.43
CCDC78-210ENST00000478979 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
CCDC78-210ENST00000478979 ERBB4Q15303 1308 aa17.73■□□□□ 0.43
CCDC78-210ENST00000478979 ZFYVE9O95405 1425 aa17.73■□□□□ 0.43
CCDC78-210ENST00000478979 ESPNB1AK53 854 aa17.73■□□□□ 0.43
CCDC78-210ENST00000478979 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
CCDC78-210ENST00000478979 TRAK2O60296 914 aa17.72■□□□□ 0.43
CCDC78-210ENST00000478979 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
CCDC78-210ENST00000478979 CLTCQ00610 1675 aaKnown RBP17.72■□□□□ 0.43
CCDC78-210ENST00000478979 METP08581 1390 aa17.72■□□□□ 0.43
CCDC78-210ENST00000478979 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
CCDC78-210ENST00000478979 NUDT16Q96DE0 195 aaKnown RBP17.7■□□□□ 0.42
CCDC78-210ENST00000478979 ARHGEF40Q8TER5 1519 aa17.7■□□□□ 0.42
CCDC78-210ENST00000478979 WASLO00401 505 aaPredicted RBP17.7■□□□□ 0.42
CCDC78-210ENST00000478979 LNPKQ9C0E8 428 aa17.7■□□□□ 0.42
CCDC78-210ENST00000478979 GRPEL1Q9HAV7 217 aa17.7■□□□□ 0.42
CCDC78-210ENST00000478979 PPIP5K1Q6PFW1 1433 aa17.69■□□□□ 0.42
CCDC78-210ENST00000478979 FCHSD2O94868 740 aa17.68■□□□□ 0.42
CCDC78-210ENST00000478979 DDX19BQ9UMR2 479 aa17.68■□□□□ 0.42
CCDC78-210ENST00000478979 A2ML1A8K2U0 1454 aa17.68■□□□□ 0.42
CCDC78-210ENST00000478979 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
CCDC78-210ENST00000478979 COG3Q96JB2 828 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms