RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 LIMD1Q9UGP4 676 aa6.77□□□□□ -1.33
SUPT20H-215ENST00000478911 ALDH1A1P00352 501 aa6.76□□□□□ -1.33
SUPT20H-215ENST00000478911 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
SUPT20H-215ENST00000478911 RIC3Q7Z5B4 369 aa6.76□□□□□ -1.33
SUPT20H-215ENST00000478911 MOXD2PA6NHM9 499 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 SPTLC1O15269 473 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 KDM4AO75164 1064 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 BMP1P13497 986 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 FLIIQ13045 1269 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 TUSC1Q2TAM9 212 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 RSBN1LQ6PCB5 846 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 NPAS3Q8IXF0 933 aa6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 ATP1B4Q9UN42 357 aaPredicted RBP6.75□□□□□ -1.33
SUPT20H-215ENST00000478911 GJA5P36382 358 aa6.74□□□□□ -1.33
SUPT20H-215ENST00000478911 VEGFBP49765 207 aa6.74□□□□□ -1.33
SUPT20H-215ENST00000478911 USP46P62068 366 aa6.74□□□□□ -1.33
SUPT20H-215ENST00000478911 H3BM21 787 aa6.73□□□□□ -1.33
SUPT20H-215ENST00000478911 NDUFV2P19404 249 aa6.73□□□□□ -1.33
SUPT20H-215ENST00000478911 FBXO31Q5XUX0 539 aaPredicted RBP6.73□□□□□ -1.33
SUPT20H-215ENST00000478911 TRIM46Q7Z4K8 759 aa6.73□□□□□ -1.33
SUPT20H-215ENST00000478911 CAPN5O15484 640 aaPredicted RBP6.72□□□□□ -1.33
SUPT20H-215ENST00000478911 HOXA2O43364 376 aa6.72□□□□□ -1.33
SUPT20H-215ENST00000478911 RFC5P40937 340 aa6.72□□□□□ -1.33
SUPT20H-215ENST00000478911 MCM6Q14566 821 aa6.72□□□□□ -1.33
SUPT20H-215ENST00000478911 PPP2R2DQ66LE6 453 aa6.72□□□□□ -1.33
SUPT20H-215ENST00000478911 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
SUPT20H-215ENST00000478911 EHBP1Q8NDI1 1231 aa6.71□□□□□ -1.34
SUPT20H-215ENST00000478911 PCDHB15Q9Y5E8 787 aa6.71□□□□□ -1.34
SUPT20H-215ENST00000478911 WASF2Q9Y6W5 498 aa6.71□□□□□ -1.34
SUPT20H-215ENST00000478911 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
SUPT20H-215ENST00000478911 LILRB3O75022 631 aa6.7□□□□□ -1.34
SUPT20H-215ENST00000478911 QPCTQ16769 361 aa6.7□□□□□ -1.34
SUPT20H-215ENST00000478911 CSPP1Q1MSJ5 1256 aa6.7□□□□□ -1.34
SUPT20H-215ENST00000478911 SIAH2O43255 324 aa6.69□□□□□ -1.34
SUPT20H-215ENST00000478911 FDX1P10109 184 aa6.69□□□□□ -1.34
SUPT20H-215ENST00000478911 HLA-CQ95604 372 aa6.69□□□□□ -1.34
SUPT20H-215ENST00000478911 PCDHGC3Q9UN70 934 aa6.69□□□□□ -1.34
SUPT20H-215ENST00000478911 JUNDP17535 347 aa6.68□□□□□ -1.34
SUPT20H-215ENST00000478911 GUCA2AQ02747 115 aa6.68□□□□□ -1.34
SUPT20H-215ENST00000478911 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
SUPT20H-215ENST00000478911 BANK1Q8NDB2 785 aa6.68□□□□□ -1.34
SUPT20H-215ENST00000478911 CABLES1Q8TDN4 633 aa6.68□□□□□ -1.34
SUPT20H-215ENST00000478911 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
SUPT20H-215ENST00000478911 SUPT5HO00267 1087 aaKnown RBP6.67□□□□□ -1.34
SUPT20H-215ENST00000478911 TMEM259Q4ZIN3 620 aa6.67□□□□□ -1.34
SUPT20H-215ENST00000478911 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
SUPT20H-215ENST00000478911 ZFP42Q96MM3 310 aa6.67□□□□□ -1.34
SUPT20H-215ENST00000478911 ZBTB3Q9H5J0 574 aa6.67□□□□□ -1.34
SUPT20H-215ENST00000478911 UBTFP17480 764 aaKnown RBP6.66□□□□□ -1.34
SUPT20H-215ENST00000478911 HRCP23327 699 aa6.66□□□□□ -1.34
SUPT20H-215ENST00000478911 SUZ12Q15022 739 aaKnown RBP6.66□□□□□ -1.34
SUPT20H-215ENST00000478911 NUDT12Q9BQG2 462 aa6.66□□□□□ -1.34
SUPT20H-215ENST00000478911 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 PTCRAQ6ISU1 281 aaPredicted RBP6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 NUTM2AQ8IVF1 878 aaPredicted RBP6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 CLUAP1Q96AJ1 413 aa6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 SNRKQ9NRH2 765 aa6.65□□□□□ -1.34
SUPT20H-215ENST00000478911 A6NJR5 290 aa6.64□□□□□ -1.35
SUPT20H-215ENST00000478911 SYMPKQ92797 1274 aaKnown RBP6.64□□□□□ -1.35
SUPT20H-215ENST00000478911 AP1G2O75843 785 aa6.63□□□□□ -1.35
SUPT20H-215ENST00000478911 SH3BP2P78314 561 aa6.63□□□□□ -1.35
SUPT20H-215ENST00000478911 MTMR2Q13614 643 aa6.63□□□□□ -1.35
SUPT20H-215ENST00000478911 RETREG3Q86VR2 466 aa6.63□□□□□ -1.35
SUPT20H-215ENST00000478911 MTMR14Q8NCE2 650 aa6.63□□□□□ -1.35
SUPT20H-215ENST00000478911 POM121Q96HA1 1249 aa6.63□□□□□ -1.35
SUPT20H-215ENST00000478911 SOCS7O14512 581 aa6.62□□□□□ -1.35
SUPT20H-215ENST00000478911 USP17L8P0C7I0 530 aa6.62□□□□□ -1.35
SUPT20H-215ENST00000478911 SCARF1Q14162 830 aa6.62□□□□□ -1.35
SUPT20H-215ENST00000478911 MRPL14Q6P1L8 145 aaKnown RBP6.62□□□□□ -1.35
SUPT20H-215ENST00000478911 TLL2Q9Y6L7 1015 aa6.62□□□□□ -1.35
SUPT20H-215ENST00000478911 C6orf229H3BNL8 230 aa6.61□□□□□ -1.35
SUPT20H-215ENST00000478911 VSIG8P0DPA2 414 aa6.61□□□□□ -1.35
SUPT20H-215ENST00000478911 SOBPA7XYQ1 873 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 CFAP99D6REC4 459 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 CCNYL3P0C7X3 344 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 NNTQ13423 1086 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 KCTD17Q8N5Z5 321 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 COG6Q9Y2V7 657 aa6.6□□□□□ -1.35
SUPT20H-215ENST00000478911 RAD21O60216 631 aa6.59□□□□□ -1.35
SUPT20H-215ENST00000478911 TRAK2O60296 914 aa6.59□□□□□ -1.35
SUPT20H-215ENST00000478911 KCNMA1Q12791 1236 aa6.59□□□□□ -1.35
SUPT20H-215ENST00000478911 PROSER2Q86WR7 435 aaPredicted RBP6.59□□□□□ -1.35
SUPT20H-215ENST00000478911 FNBP4Q8N3X1 1017 aaPredicted RBP6.59□□□□□ -1.35
SUPT20H-215ENST00000478911 ADH1CP00326 375 aa6.58□□□□□ -1.36
SUPT20H-215ENST00000478911 CTDSPL2Q05D32 466 aa6.58□□□□□ -1.36
SUPT20H-215ENST00000478911 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
SUPT20H-215ENST00000478911 PRR7Q8TB68 274 aa6.58□□□□□ -1.36
SUPT20H-215ENST00000478911 C1orf115Q9H7X2 142 aa6.58□□□□□ -1.36
SUPT20H-215ENST00000478911 APBB1O00213 710 aa6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 TIMP2P16035 220 aa6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 VARSP26640 1264 aaKnown RBP6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 WDR4P57081 412 aaKnown RBP6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 BAP1Q92560 729 aa6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 TSC1Q92574 1164 aa6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 GJD4Q96KN9 370 aaPredicted RBP6.57□□□□□ -1.36
SUPT20H-215ENST00000478911 UNC93B1Q9H1C4 597 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms