RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 NEDD1Q8NHV4 660 aa3.94□□□□□ -1.78
SRRM1-211ENST00000478890 FMNL2Q96PY5 1086 aa3.94□□□□□ -1.78
SRRM1-211ENST00000478890 TSHZ2Q9NRE2 1034 aa3.94□□□□□ -1.78
SRRM1-211ENST00000478890 SLC10A3P09131 477 aa3.93□□□□□ -1.78
SRRM1-211ENST00000478890 P3H3Q8IVL6 736 aa3.92□□□□□ -1.78
SRRM1-211ENST00000478890 SALL2Q9Y467 1007 aaPredicted RBP3.92□□□□□ -1.78
SRRM1-211ENST00000478890 FECHP22830 423 aa3.91□□□□□ -1.78
SRRM1-211ENST00000478890 HAP1P54257 671 aaPredicted RBP3.91□□□□□ -1.78
SRRM1-211ENST00000478890 SV2AQ7L0J3 742 aa3.91□□□□□ -1.78
SRRM1-211ENST00000478890 EHBP1Q8NDI1 1231 aa3.91□□□□□ -1.78
SRRM1-211ENST00000478890 CDHR5Q9HBB8 845 aa3.91□□□□□ -1.78
SRRM1-211ENST00000478890 ADH1CP00326 375 aa3.9□□□□□ -1.79
SRRM1-211ENST00000478890 TIMP2P16035 220 aa3.9□□□□□ -1.79
SRRM1-211ENST00000478890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.9□□□□□ -1.791e-8■■■■□ 19.3
SRRM1-211ENST00000478890 KCNV2Q8TDN2 545 aa3.9□□□□□ -1.79
SRRM1-211ENST00000478890 DNMT3LQ9UJW3 386 aa3.9□□□□□ -1.79
SRRM1-211ENST00000478890 PLCB2Q00722 1185 aa3.89□□□□□ -1.79
SRRM1-211ENST00000478890 PTSQ03393 145 aa3.89□□□□□ -1.79
SRRM1-211ENST00000478890 MORN1Q5T089 497 aa3.89□□□□□ -1.79
SRRM1-211ENST00000478890 C6orf118Q5T5N4 469 aa3.89□□□□□ -1.79
SRRM1-211ENST00000478890 VWA5B2Q8N398 1253 aa3.89□□□□□ -1.79
SRRM1-211ENST00000478890 ARHGEF1Q92888 912 aaKnown RBP3.89□□□□□ -1.79
SRRM1-211ENST00000478890 CDC14CA4D256 554 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 UPP2O95045 317 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 BCRP11274 1271 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 PRIM1P49642 420 aaKnown RBP3.88□□□□□ -1.79
SRRM1-211ENST00000478890 MMP16P51512 607 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 WDR4P57081 412 aaKnown RBP3.88□□□□□ -1.79
SRRM1-211ENST00000478890 LRP8Q14114 963 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 RSPH4AQ5TD94 716 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 CCDC155Q8N6L0 562 aa3.88□□□□□ -1.79
SRRM1-211ENST00000478890 ARIH1Q9Y4X5 557 aaPredicted RBP3.88□□□□□ -1.79
SRRM1-211ENST00000478890 SOS2Q07890 1332 aaPredicted RBP3.88□□□□□ -1.79
SRRM1-211ENST00000478890 C1QTNF9BB2RNN3 333 aa3.87□□□□□ -1.79
SRRM1-211ENST00000478890 BMP2P12643 396 aa3.87□□□□□ -1.79
SRRM1-211ENST00000478890 NNTQ13423 1086 aa3.87□□□□□ -1.79
SRRM1-211ENST00000478890 BRICD5Q6PL45 260 aa3.87□□□□□ -1.79
SRRM1-211ENST00000478890 SH3RF1Q7Z6J0 888 aa3.87□□□□□ -1.79
SRRM1-211ENST00000478890 COL17A1Q9UMD9 1497 aaPredicted RBP3.86□□□□□ -1.79
SRRM1-211ENST00000478890 PLEKHG3A1L390 1219 aa3.86□□□□□ -1.79
SRRM1-211ENST00000478890 NUTM2FA1L443 756 aa3.86□□□□□ -1.79
SRRM1-211ENST00000478890 OSBPP22059 807 aa3.86□□□□□ -1.79
SRRM1-211ENST00000478890 MLLT3P42568 568 aaPredicted RBP3.86□□□□□ -1.79
SRRM1-211ENST00000478890 DOC2BQ14184 412 aa3.86□□□□□ -1.79
SRRM1-211ENST00000478890 RBM46Q8TBY0 533 aaKnown RBP3.86□□□□□ -1.79
SRRM1-211ENST00000478890 LRRC4BQ9NT99 713 aa3.86□□□□□ -1.79
SRRM1-211ENST00000478890 ITGA6P23229 1130 aa3.85□□□□□ -1.79
SRRM1-211ENST00000478890 COL8A1P27658 744 aa3.85□□□□□ -1.79
SRRM1-211ENST00000478890 MKL2Q9ULH7 1088 aa3.85□□□□□ -1.79
SRRM1-211ENST00000478890 CD163Q86VB7 1156 aa3.84□□□□□ -1.79
SRRM1-211ENST00000478890 SLC27A5Q9Y2P5 690 aa3.84□□□□□ -1.79
SRRM1-211ENST00000478890 RCCD1A6NED2 376 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 SEMA3EO15041 775 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 ATP6V1AP38606 617 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 SMYD5Q6GMV2 418 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 LINC00528Q8N1L1 170 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 CCDC24Q8N4L8 307 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 MPNDQ8N594 471 aa3.83□□□□□ -1.8
SRRM1-211ENST00000478890 CCER1Q8TC90 406 aaPredicted RBP3.83□□□□□ -1.8
SRRM1-211ENST00000478890 KLF16Q9BXK1 252 aaPredicted RBP3.83□□□□□ -1.8
SRRM1-211ENST00000478890 NPDC1Q9NQX5 325 aaPredicted RBP3.83□□□□□ -1.8
SRRM1-211ENST00000478890 SLC35F4A4IF30 521 aa3.82□□□□□ -1.8
SRRM1-211ENST00000478890 TULP1O00294 542 aaPredicted RBP3.82□□□□□ -1.8
SRRM1-211ENST00000478890 FCHSD2O94868 740 aa3.82□□□□□ -1.8
SRRM1-211ENST00000478890 HYAL3O43820 417 aaPredicted RBP3.81□□□□□ -1.8
SRRM1-211ENST00000478890 DXOO77932 396 aaKnown RBP3.81□□□□□ -1.8
SRRM1-211ENST00000478890 GRIN2CQ14957 1233 aa3.81□□□□□ -1.8
SRRM1-211ENST00000478890 RSPO4Q2I0M5 234 aaPredicted RBP3.81□□□□□ -1.8
SRRM1-211ENST00000478890 ZIC2O95409 532 aaPredicted RBP3.8□□□□□ -1.8
SRRM1-211ENST00000478890 CHRNA4P43681 627 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 SNRPNP63162 240 aaKnown RBP3.8□□□□□ -1.8
SRRM1-211ENST00000478890 JAG1P78504 1218 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 PTGDRQ13258 359 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 GAS6Q14393 721 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 RNF19BQ6ZMZ0 732 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 MBIPQ9NS73 344 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 TLL2Q9Y6L7 1015 aa3.8□□□□□ -1.8
SRRM1-211ENST00000478890 TTLL8A6PVC2 850 aa3.79□□□□□ -1.8
SRRM1-211ENST00000478890 FUT2Q10981 343 aa3.79□□□□□ -1.8
SRRM1-211ENST00000478890 FAM161AQ3B820 660 aa3.79□□□□□ -1.8
SRRM1-211ENST00000478890 RBM26Q5T8P6 1007 aaKnown RBP3.79□□□□□ -1.8
SRRM1-211ENST00000478890 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
SRRM1-211ENST00000478890 IGF1RP08069 1367 aa3.78□□□□□ -1.8
SRRM1-211ENST00000478890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.78□□□□□ -1.8
SRRM1-211ENST00000478890 PIK3R2O00459 728 aa3.78□□□□□ -1.8
SRRM1-211ENST00000478890 NKAPLQ5M9Q1 402 aa3.78□□□□□ -1.8
SRRM1-211ENST00000478890 GPIHBP1Q8IV16 184 aa3.78□□□□□ -1.8
SRRM1-211ENST00000478890 MEIOBQ8N635 442 aa3.78□□□□□ -1.8
SRRM1-211ENST00000478890 ZFAND3Q9H8U3 227 aa3.78□□□□□ -1.8
SRRM1-211ENST00000478890 TESPA1A2RU30 521 aaPredicted RBP3.77□□□□□ -1.81
SRRM1-211ENST00000478890 DYRK3O43781 588 aa3.77□□□□□ -1.81
SRRM1-211ENST00000478890 GATA4P43694 442 aa3.77□□□□□ -1.81
SRRM1-211ENST00000478890 HIC1Q14526 733 aa3.77□□□□□ -1.81
SRRM1-211ENST00000478890 Q3C1V9 767 aa3.77□□□□□ -1.81
SRRM1-211ENST00000478890 ACDQ96AP0 544 aa3.77□□□□□ -1.81
SRRM1-211ENST00000478890 ADGRG1Q9Y653 693 aa3.77□□□□□ -1.81
SRRM1-211ENST00000478890 GNPATO15228 680 aa3.76□□□□□ -1.81
SRRM1-211ENST00000478890 OIP5O43482 229 aa3.76□□□□□ -1.81
SRRM1-211ENST00000478890 OATP04181 439 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms