RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 PARP9Q8IXQ6 854 aa8.54□□□□□ -1.04
VLDLR-204ENST00000478776 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
VLDLR-204ENST00000478776 WIPF1O43516 503 aa8.53□□□□□ -1.04
VLDLR-204ENST00000478776 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
VLDLR-204ENST00000478776 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
VLDLR-204ENST00000478776 STK17AQ9UEE5 414 aa8.53□□□□□ -1.04
VLDLR-204ENST00000478776 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
VLDLR-204ENST00000478776 SPTLC1O15269 473 aa8.52□□□□□ -1.05
VLDLR-204ENST00000478776 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
VLDLR-204ENST00000478776 RIC3Q7Z5B4 369 aa8.52□□□□□ -1.05
VLDLR-204ENST00000478776 HRCP23327 699 aa8.51□□□□□ -1.05
VLDLR-204ENST00000478776 NNTQ13423 1086 aa8.51□□□□□ -1.05
VLDLR-204ENST00000478776 AGERQ15109 404 aa8.51□□□□□ -1.05
VLDLR-204ENST00000478776 TRIM46Q7Z4K8 759 aa8.51□□□□□ -1.05
VLDLR-204ENST00000478776 MPNDQ8N594 471 aa8.51□□□□□ -1.05
VLDLR-204ENST00000478776 TSC1Q92574 1164 aa8.51□□□□□ -1.05
VLDLR-204ENST00000478776 NXF1Q9UBU9 619 aaKnown RBP8.51□□□□□ -1.05
VLDLR-204ENST00000478776 NUTM2BA6NNL0 878 aaPredicted RBP8.5□□□□□ -1.05
VLDLR-204ENST00000478776 NUTM2EB1AL46 878 aaPredicted RBP8.5□□□□□ -1.05
VLDLR-204ENST00000478776 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
VLDLR-204ENST00000478776 SCARF1Q14162 830 aa8.5□□□□□ -1.05
VLDLR-204ENST00000478776 ARID5BQ14865 1188 aa8.5□□□□□ -1.05
VLDLR-204ENST00000478776 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
VLDLR-204ENST00000478776 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
VLDLR-204ENST00000478776 NUTM2AQ8IVF1 878 aaPredicted RBP8.5□□□□□ -1.05
VLDLR-204ENST00000478776 ADH1CP00326 375 aa8.48□□□□□ -1.05
VLDLR-204ENST00000478776 WDR4P57081 412 aaKnown RBP8.48□□□□□ -1.05
VLDLR-204ENST00000478776 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
VLDLR-204ENST00000478776 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
VLDLR-204ENST00000478776 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
VLDLR-204ENST00000478776 FOXJ1Q92949 421 aa8.47□□□□□ -1.05
VLDLR-204ENST00000478776 IRF7Q92985 503 aa8.47□□□□□ -1.05
VLDLR-204ENST00000478776 MRPL14Q6P1L8 145 aaKnown RBP8.46□□□□□ -1.06
VLDLR-204ENST00000478776 NPAS3Q8IXF0 933 aa8.46□□□□□ -1.06
VLDLR-204ENST00000478776 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
VLDLR-204ENST00000478776 FAM181BA6NEQ2 426 aa8.45□□□□□ -1.06
VLDLR-204ENST00000478776 F12P00748 615 aaPredicted RBP8.45□□□□□ -1.06
VLDLR-204ENST00000478776 PDE4DQ08499 809 aa8.45□□□□□ -1.06
VLDLR-204ENST00000478776 BPHLQ86WA6 291 aaPredicted RBP8.45□□□□□ -1.06
VLDLR-204ENST00000478776 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
VLDLR-204ENST00000478776 TIMP2P16035 220 aa8.44□□□□□ -1.06
VLDLR-204ENST00000478776 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
VLDLR-204ENST00000478776 CDK15Q96Q40 435 aa8.44□□□□□ -1.06
VLDLR-204ENST00000478776 SLC24A1O60721 1099 aa8.43□□□□□ -1.06
VLDLR-204ENST00000478776 VEGFBP49765 207 aa8.43□□□□□ -1.06
VLDLR-204ENST00000478776 NR5A1Q13285 461 aa8.43□□□□□ -1.06
VLDLR-204ENST00000478776 MYSM1Q5VVJ2 828 aa8.43□□□□□ -1.06
VLDLR-204ENST00000478776 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
VLDLR-204ENST00000478776 UPP2O95045 317 aa8.42□□□□□ -1.06
VLDLR-204ENST00000478776 ZIC2O95409 532 aaPredicted RBP8.42□□□□□ -1.06
VLDLR-204ENST00000478776 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
VLDLR-204ENST00000478776 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
VLDLR-204ENST00000478776 GMPRP36959 345 aa8.41□□□□□ -1.06
VLDLR-204ENST00000478776 QPCTQ16769 361 aa8.41□□□□□ -1.06
VLDLR-204ENST00000478776 TUSC1Q2TAM9 212 aa8.41□□□□□ -1.06
VLDLR-204ENST00000478776 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
VLDLR-204ENST00000478776 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
VLDLR-204ENST00000478776 H3BM21 787 aa8.4□□□□□ -1.06
VLDLR-204ENST00000478776 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
VLDLR-204ENST00000478776 MAN1A2O60476 641 aa8.39□□□□□ -1.07
VLDLR-204ENST00000478776 LILRB3O75022 631 aa8.39□□□□□ -1.07
VLDLR-204ENST00000478776 C6orf118Q5T5N4 469 aa8.39□□□□□ -1.07
VLDLR-204ENST00000478776 ITPKCQ96DU7 683 aa8.39□□□□□ -1.07
VLDLR-204ENST00000478776 ZFAND3Q9H8U3 227 aa8.39□□□□□ -1.07
VLDLR-204ENST00000478776 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
VLDLR-204ENST00000478776 CLK2P49760 499 aaKnown RBP8.38□□□□□ -1.07
VLDLR-204ENST00000478776 ZSCAN1Q8NBB4 408 aa8.38□□□□□ -1.07
VLDLR-204ENST00000478776 KLF16Q9BXK1 252 aaPredicted RBP8.38□□□□□ -1.07
VLDLR-204ENST00000478776 ATP1B4Q9UN42 357 aaPredicted RBP8.38□□□□□ -1.07
VLDLR-204ENST00000478776 BMP2P12643 396 aa8.37□□□□□ -1.07
VLDLR-204ENST00000478776 GRM5P41594 1212 aa8.37□□□□□ -1.07
VLDLR-204ENST00000478776 C4orf48Q5BLP8 95 aa8.37□□□□□ -1.07
VLDLR-204ENST00000478776 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
VLDLR-204ENST00000478776 POLR3EQ9NVU0 708 aa8.37□□□□□ -1.07
VLDLR-204ENST00000478776 SOBPA7XYQ1 873 aa8.36□□□□□ -1.07
VLDLR-204ENST00000478776 NR3C2P08235 984 aa8.36□□□□□ -1.07
VLDLR-204ENST00000478776 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
VLDLR-204ENST00000478776 FSHRP23945 695 aa8.35□□□□□ -1.07
VLDLR-204ENST00000478776 CARD14Q9BXL6 1004 aa8.35□□□□□ -1.07
VLDLR-204ENST00000478776 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
VLDLR-204ENST00000478776 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
VLDLR-204ENST00000478776 EMILIN1Q9Y6C2 1016 aa8.34□□□□□ -1.07
VLDLR-204ENST00000478776 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
VLDLR-204ENST00000478776 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
VLDLR-204ENST00000478776 MAP4K5Q9Y4K4 846 aa8.33□□□□□ -1.08
VLDLR-204ENST00000478776 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
VLDLR-204ENST00000478776 SH3RF1Q7Z6J0 888 aa8.32□□□□□ -1.08
VLDLR-204ENST00000478776 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
VLDLR-204ENST00000478776 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
VLDLR-204ENST00000478776 TRMT44Q8IYL2 757 aaKnown RBP8.31□□□□□ -1.08
VLDLR-204ENST00000478776 MEIOBQ8N635 442 aa8.31□□□□□ -1.08
VLDLR-204ENST00000478776 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
VLDLR-204ENST00000478776 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
VLDLR-204ENST00000478776 ZBTB33Q86T24 672 aa8.29□□□□□ -1.08
VLDLR-204ENST00000478776 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
VLDLR-204ENST00000478776 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
VLDLR-204ENST00000478776 PDXDC2PQ6P474 469 aa8.28□□□□□ -1.08
VLDLR-204ENST00000478776 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
VLDLR-204ENST00000478776 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
VLDLR-204ENST00000478776 FKBPLQ9UIM3 349 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms