RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 CDK19Q9BWU1 502 aa31.8■■■□□ 2.68
MCF2L2-210ENST00000478652 VPS72Q15906 364 aa31.79■■■□□ 2.68
MCF2L2-210ENST00000478652 TRPM1Q7Z4N2 1603 aa31.78■■■□□ 2.68
MCF2L2-210ENST00000478652 PAK3O75914 559 aaPredicted RBP31.76■■■□□ 2.67
MCF2L2-210ENST00000478652 POLR3AO14802 1390 aaPredicted RBP31.73■■■□□ 2.67
MCF2L2-210ENST00000478652 L3MBTL2Q969R5 705 aa31.73■■■□□ 2.67
MCF2L2-210ENST00000478652 SIN3AQ96ST3 1273 aa31.73■■■□□ 2.67
MCF2L2-210ENST00000478652 CCDC9Q9Y3X0 531 aaKnown RBP31.73■■■□□ 2.67
MCF2L2-210ENST00000478652 SEPT12Q8IYM1 358 aa31.71■■■□□ 2.67
MCF2L2-210ENST00000478652 BTG4Q9NY30 223 aa31.7■■■□□ 2.67
MCF2L2-210ENST00000478652 ACEP12821 1306 aa31.7■■■□□ 2.66
MCF2L2-210ENST00000478652 CENPJQ9HC77 1338 aaPredicted RBP31.69■■■□□ 2.66
MCF2L2-210ENST00000478652 CCDC61Q9Y6R9 512 aa31.68■■■□□ 2.66
MCF2L2-210ENST00000478652 NRKQ7Z2Y5 1582 aa31.67■■■□□ 2.66
MCF2L2-210ENST00000478652 ONECUT3O60422 494 aaPredicted RBP31.66■■■□□ 2.66
MCF2L2-210ENST00000478652 NUTM2GQ5VZR2 741 aa31.65■■■□□ 2.66
MCF2L2-210ENST00000478652 PLEKHG3A1L390 1219 aa31.64■■■□□ 2.66
MCF2L2-210ENST00000478652 NBPF8Q3BBV2 869 aa31.64■■■□□ 2.66
MCF2L2-210ENST00000478652 PPIP5K1Q6PFW1 1433 aa31.64■■■□□ 2.66
MCF2L2-210ENST00000478652 KIAA0232Q92628 1395 aa31.63■■■□□ 2.65
MCF2L2-210ENST00000478652 THSD7AQ9UPZ6 1657 aa31.63■■■□□ 2.65
MCF2L2-210ENST00000478652 CABP2Q9NPB3 220 aa31.62■■■□□ 2.65
MCF2L2-210ENST00000478652 PRDM11Q9NQV5 511 aa31.62■■■□□ 2.65
MCF2L2-210ENST00000478652 BLMP54132 1417 aaPredicted RBP31.61■■■□□ 2.65
MCF2L2-210ENST00000478652 SRPK2P78362 688 aaKnown RBP31.61■■■□□ 2.65
MCF2L2-210ENST00000478652 NEUROD1Q13562 356 aa31.61■■■□□ 2.65
MCF2L2-210ENST00000478652 CCDC125Q86Z20 511 aa31.61■■■□□ 2.65
MCF2L2-210ENST00000478652 FAM98CQ17RN3 349 aaKnown RBP31.6■■■□□ 2.65
MCF2L2-210ENST00000478652 CHRNA2Q15822 529 aa31.59■■■□□ 2.65
MCF2L2-210ENST00000478652 SPATA31A5Q5VU36 1347 aa31.57■■■□□ 2.64
MCF2L2-210ENST00000478652 SPATA31A7Q8IWB4 1347 aa31.57■■■□□ 2.64
MCF2L2-210ENST00000478652 A0A0G2JS52 829 aa31.57■■■□□ 2.64
MCF2L2-210ENST00000478652 MYT1Q01538 1121 aa31.57■■■□□ 2.64
MCF2L2-210ENST00000478652 KRT27Q7Z3Y8 459 aa31.57■■■□□ 2.64
MCF2L2-210ENST00000478652 LMO7Q8WWI1 1683 aa31.57■■■□□ 2.64
MCF2L2-210ENST00000478652 ZC3H6P61129 1189 aaKnown RBP31.55■■■□□ 2.64
MCF2L2-210ENST00000478652 AKAP12Q02952 1782 aa31.53■■■□□ 2.64
MCF2L2-210ENST00000478652 ABTB2Q8N961 1025 aa31.53■■■□□ 2.64
MCF2L2-210ENST00000478652 ROCK2O75116 1388 aaKnown RBP31.53■■■□□ 2.64
MCF2L2-210ENST00000478652 USP19O94966 1318 aa31.52■■■□□ 2.64
MCF2L2-210ENST00000478652 DEFB132Q7Z7B7 95 aa31.52■■■□□ 2.64
MCF2L2-210ENST00000478652 PIK3C2AO00443 1686 aa31.51■■■□□ 2.64
MCF2L2-210ENST00000478652 RGPD1P0DJD0 1748 aa31.51■■■□□ 2.63
MCF2L2-210ENST00000478652 CAMTA1Q9Y6Y1 1673 aa31.51■■■□□ 2.63
MCF2L2-210ENST00000478652 USP6P35125 1406 aa31.49■■■□□ 2.63
MCF2L2-210ENST00000478652 STRN4Q9NRL3 753 aa31.49■■■□□ 2.63
MCF2L2-210ENST00000478652 CABP1Q9NZU7 370 aa31.48■■■□□ 2.63
MCF2L2-210ENST00000478652 TNS1Q9HBL0 1735 aaKnown RBP31.48■■■□□ 2.63
MCF2L2-210ENST00000478652 SPATA31A1Q5TZJ5 1347 aa31.48■■■□□ 2.63
MCF2L2-210ENST00000478652 ZRANB1Q9UGI0 708 aa31.47■■■□□ 2.63
MCF2L2-210ENST00000478652 FAM182BQ5T319 152 aa31.46■■■□□ 2.63
MCF2L2-210ENST00000478652 CPDO75976 1380 aa31.45■■■□□ 2.63
MCF2L2-210ENST00000478652 SSH2Q76I76 1423 aa31.45■■■□□ 2.63
MCF2L2-210ENST00000478652 EVC2Q86UK5 1308 aa31.44■■■□□ 2.62
MCF2L2-210ENST00000478652 SLIT3O75094 1523 aa31.44■■■□□ 2.62
MCF2L2-210ENST00000478652 BRD4O60885 1362 aaPredicted RBP31.43■■■□□ 2.62
MCF2L2-210ENST00000478652 SF3B2Q13435 895 aaKnown RBP31.42■■■□□ 2.62
MCF2L2-210ENST00000478652 NLRP13Q86W25 1043 aa31.42■■■□□ 2.62
MCF2L2-210ENST00000478652 MON2Q7Z3U7 1717 aa31.4■■■□□ 2.62
MCF2L2-210ENST00000478652 COL18A1P39060 1754 aa31.4■■■□□ 2.62
MCF2L2-210ENST00000478652 RGPD5Q99666 1765 aa31.4■■■□□ 2.62
MCF2L2-210ENST00000478652 GCP02774 474 aa31.39■■■□□ 2.62
MCF2L2-210ENST00000478652 USP35Q9P2H5 1018 aa31.38■■■□□ 2.61
MCF2L2-210ENST00000478652 LARP1Q6PKG0 1096 aaKnown RBP31.37■■■□□ 2.61
MCF2L2-210ENST00000478652 COL5A2P05997 1499 aaPredicted RBP31.37■■■□□ 2.61
MCF2L2-210ENST00000478652 EVA1CP58658 441 aa31.35■■■□□ 2.61
MCF2L2-210ENST00000478652 PARP4Q9UKK3 1724 aaKnown RBP31.35■■■□□ 2.61
MCF2L2-210ENST00000478652 WNK3Q9BYP7 1800 aa31.34■■■□□ 2.61
MCF2L2-210ENST00000478652 NLRP6P59044 892 aa31.34■■■□□ 2.61
MCF2L2-210ENST00000478652 SRCAPQ6ZRS2 3230 aa31.31■■■□□ 2.6
MCF2L2-210ENST00000478652 CPSF1Q10570 1443 aaKnown RBP31.31■■■□□ 2.6
MCF2L2-210ENST00000478652 ZBTB7CA1YPR0 619 aa31.3■■■□□ 2.6
MCF2L2-210ENST00000478652 BAG6P46379 1132 aa31.3■■■□□ 2.6
MCF2L2-210ENST00000478652 BARGINQ6ZT62 677 aa31.3■■■□□ 2.6
MCF2L2-210ENST00000478652 TONSLQ96HA7 1378 aa31.3■■■□□ 2.6
MCF2L2-210ENST00000478652 SBNO2Q9Y2G9 1366 aa31.3■■■□□ 2.6
MCF2L2-210ENST00000478652 TTC21BQ7Z4L5 1316 aa31.28■■■□□ 2.6
MCF2L2-210ENST00000478652 CARD11Q9BXL7 1154 aa31.28■■■□□ 2.6
MCF2L2-210ENST00000478652 EN1Q05925 392 aaPredicted RBP31.27■■■□□ 2.6
MCF2L2-210ENST00000478652 TCP11L2Q8N4U5 519 aa31.27■■■□□ 2.6
MCF2L2-210ENST00000478652 LRRC37A3O60309 1634 aa31.26■■■□□ 2.59
MCF2L2-210ENST00000478652 AATKQ6ZMQ8 1374 aa31.26■■■□□ 2.59
MCF2L2-210ENST00000478652 USP54Q70EL1 1684 aa31.25■■■□□ 2.59
MCF2L2-210ENST00000478652 DISP2A7MBM2 1401 aa31.25■■■□□ 2.59
MCF2L2-210ENST00000478652 CRB1P82279 1406 aa31.25■■■□□ 2.59
MCF2L2-210ENST00000478652 NFAT5O94916 1531 aa31.24■■■□□ 2.59
MCF2L2-210ENST00000478652 CD163L1Q9NR16 1453 aa31.24■■■□□ 2.59
MCF2L2-210ENST00000478652 KTN1Q86UP2 1357 aaKnown RBP31.23■■■□□ 2.59
MCF2L2-210ENST00000478652 ZNF692Q9BU19 519 aaPredicted RBP31.23■■■□□ 2.59
MCF2L2-210ENST00000478652 SBF2Q86WG5 1849 aa31.22■■■□□ 2.59
MCF2L2-210ENST00000478652 PEAK1Q9H792 1746 aa31.21■■■□□ 2.59
MCF2L2-210ENST00000478652 TRIM37O94972 964 aa31.21■■■□□ 2.59
MCF2L2-210ENST00000478652 FAM196AQ6ZSG2 479 aa31.21■■■□□ 2.59
MCF2L2-210ENST00000478652 RREB1Q92766 1687 aa31.21■■■□□ 2.59
MCF2L2-210ENST00000478652 TTC21AQ8NDW8 1320 aa31.21■■■□□ 2.59
MCF2L2-210ENST00000478652 LRP5O75197 1615 aa31.2■■■□□ 2.59
MCF2L2-210ENST00000478652 LTN1O94822 1766 aa31.2■■■□□ 2.59
MCF2L2-210ENST00000478652 PSDA5PKW4 1024 aaPredicted RBP31.19■■■□□ 2.58
MCF2L2-210ENST00000478652 AXIN2Q9Y2T1 843 aa31.19■■■□□ 2.58
MCF2L2-210ENST00000478652 THRAP3Q9Y2W1 955 aaKnown RBP31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms