RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 CFAP74Q9C0B2 1584 aa10.22□□□□□ -0.77
HOXB3-209ENST00000478644 TLL1O43897 1013 aa10.22□□□□□ -0.77
HOXB3-209ENST00000478644 PUS10Q3MIT2 529 aaKnown RBP10.22□□□□□ -0.77
HOXB3-209ENST00000478644 BCANQ96GW7 911 aa10.22□□□□□ -0.77
HOXB3-209ENST00000478644 PRKD2Q9BZL6 878 aa10.22□□□□□ -0.77
HOXB3-209ENST00000478644 RNF223E7ERA6 249 aa10.21□□□□□ -0.77
HOXB3-209ENST00000478644 MDM2Q00987 491 aaPredicted RBP10.21□□□□□ -0.77
HOXB3-209ENST00000478644 THAP11Q96EK4 314 aa10.21□□□□□ -0.77
HOXB3-209ENST00000478644 FHOD3Q2V2M9 1422 aa10.21□□□□□ -0.78
HOXB3-209ENST00000478644 CLCN1P35523 988 aa10.2□□□□□ -0.78
HOXB3-209ENST00000478644 ANKLE1Q8NAG6 615 aa10.2□□□□□ -0.78
HOXB3-209ENST00000478644 GPCPD1Q9NPB8 672 aa10.2□□□□□ -0.78
HOXB3-209ENST00000478644 MAGI2Q86UL8 1455 aa10.19□□□□□ -0.78
HOXB3-209ENST00000478644 DENND4BO75064 1496 aaPredicted RBP10.18□□□□□ -0.78
HOXB3-209ENST00000478644 POGZQ7Z3K3 1410 aa10.18□□□□□ -0.78
HOXB3-209ENST00000478644 ARID3CA6NKF2 412 aa10.18□□□□□ -0.78
HOXB3-209ENST00000478644 RANGAP1P46060 587 aaPredicted RBP10.18□□□□□ -0.78
HOXB3-209ENST00000478644 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
HOXB3-209ENST00000478644 SPSB2Q99619 263 aa10.18□□□□□ -0.78
HOXB3-209ENST00000478644 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
HOXB3-209ENST00000478644 SLC27A5Q9Y2P5 690 aa10.18□□□□□ -0.78
HOXB3-209ENST00000478644 AKNAQ7Z591 1439 aa10.17□□□□□ -0.78
HOXB3-209ENST00000478644 S1PR4O95977 384 aa10.17□□□□□ -0.78
HOXB3-209ENST00000478644 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
HOXB3-209ENST00000478644 KRI1Q8N9T8 703 aaKnown RBP10.17□□□□□ -0.78
HOXB3-209ENST00000478644 SLC6A16Q9GZN6 736 aa10.17□□□□□ -0.78
HOXB3-209ENST00000478644 FANCAO15360 1455 aa10.17□□□□□ -0.78
HOXB3-209ENST00000478644 HECW1Q76N89 1606 aa10.16□□□□□ -0.78
HOXB3-209ENST00000478644 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
HOXB3-209ENST00000478644 AMHR2Q16671 573 aa10.16□□□□□ -0.78
HOXB3-209ENST00000478644 BRICD5Q6PL45 260 aa10.16□□□□□ -0.78
HOXB3-209ENST00000478644 EMID1Q96A84 441 aaPredicted RBP10.16□□□□□ -0.78
HOXB3-209ENST00000478644 PLCH2O75038 1416 aa10.16□□□□□ -0.78
HOXB3-209ENST00000478644 CLIP1P30622 1438 aa10.16□□□□□ -0.78
HOXB3-209ENST00000478644 KDM4AO75164 1064 aa10.15□□□□□ -0.78
HOXB3-209ENST00000478644 FMNL1O95466 1100 aaPredicted RBP10.15□□□□□ -0.78
HOXB3-209ENST00000478644 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
HOXB3-209ENST00000478644 USP46P62068 366 aa10.15□□□□□ -0.78
HOXB3-209ENST00000478644 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
HOXB3-209ENST00000478644 REPIN1Q9BWE0 567 aaKnown RBP10.14□□□□□ -0.79
HOXB3-209ENST00000478644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.13□□□□□ -0.79
HOXB3-209ENST00000478644 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
HOXB3-209ENST00000478644 FAM160A2Q8N612 972 aaPredicted RBP10.13□□□□□ -0.79
HOXB3-209ENST00000478644 ATP1B4Q9UN42 357 aaPredicted RBP10.13□□□□□ -0.79
HOXB3-209ENST00000478644 CCDC18Q5T9S5 1454 aa10.12□□□□□ -0.79
HOXB3-209ENST00000478644 PPEF1O14829 653 aaPredicted RBP10.12□□□□□ -0.79
HOXB3-209ENST00000478644 SLC19A1P41440 591 aa10.12□□□□□ -0.79
HOXB3-209ENST00000478644 ARHGAP35Q9NRY4 1499 aa10.11□□□□□ -0.79
HOXB3-209ENST00000478644 Q3C1V9 767 aa10.11□□□□□ -0.79
HOXB3-209ENST00000478644 MSS51Q4VC12 460 aa10.11□□□□□ -0.79
HOXB3-209ENST00000478644 ZMYM4Q5VZL5 1548 aa10.11□□□□□ -0.79
HOXB3-209ENST00000478644 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
HOXB3-209ENST00000478644 ADAMTSL3P82987 1691 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 CASKIN1Q8WXD9 1431 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 KIF14Q15058 1648 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 HOXA2O43364 376 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
HOXB3-209ENST00000478644 SPRYD7Q5W111 196 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 LIAT1Q6ZQX7 453 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 PTPRMP28827 1452 aa10.09□□□□□ -0.79
HOXB3-209ENST00000478644 SCAPERQ9BY12 1400 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 ARHGEF40Q8TER5 1519 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 RICTORQ6R327 1708 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 NRG2O14511 850 aaPredicted RBP10.08□□□□□ -0.8
HOXB3-209ENST00000478644 GFRA3O60609 400 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 RNF19BQ6ZMZ0 732 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 ZNF598Q86UK7 904 aaKnown RBP10.08□□□□□ -0.8
HOXB3-209ENST00000478644 AK7Q96M32 723 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 HECW2Q9P2P5 1572 aa10.08□□□□□ -0.8
HOXB3-209ENST00000478644 ZFYVE16Q7Z3T8 1539 aa10.07□□□□□ -0.8
HOXB3-209ENST00000478644 BCORL1Q5H9F3 1711 aa10.07□□□□□ -0.8
HOXB3-209ENST00000478644 FRMPD1Q5SYB0 1578 aa10.07□□□□□ -0.8
HOXB3-209ENST00000478644 TRIM66O15016 1216 aa10.07□□□□□ -0.8
HOXB3-209ENST00000478644 PLA2G2CQ5R387 149 aa10.07□□□□□ -0.8
HOXB3-209ENST00000478644 MYO5CQ9NQX4 1742 aa10.07□□□□□ -0.8
HOXB3-209ENST00000478644 CDK13Q14004 1512 aaKnown RBP10.07□□□□□ -0.8
HOXB3-209ENST00000478644 TTC37Q6PGP7 1564 aa10.06□□□□□ -0.8
HOXB3-209ENST00000478644 ATP10AO60312 1499 aa10.06□□□□□ -0.8
HOXB3-209ENST00000478644 MMP16P51512 607 aa10.05□□□□□ -0.8
HOXB3-209ENST00000478644 TRIM67Q6ZTA4 783 aa10.05□□□□□ -0.8
HOXB3-209ENST00000478644 C9orf84Q5VXU9 1444 aa10.05□□□□□ -0.8
HOXB3-209ENST00000478644 FYCO1Q9BQS8 1478 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 RPIAP49247 311 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 PRR20EP86478 221 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 PRR20CP86479 221 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 PRR20DP86480 221 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 PRR20BP86481 221 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 PRR20AP86496 221 aa10.04□□□□□ -0.8
HOXB3-209ENST00000478644 GIGYF2Q6Y7W6 1299 aaKnown RBP10.04□□□□□ -0.8
HOXB3-209ENST00000478644 USB1Q9BQ65 265 aaKnown RBP10.04□□□□□ -0.8
HOXB3-209ENST00000478644 ARHGAP5Q13017 1502 aa10.03□□□□□ -0.8
HOXB3-209ENST00000478644 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
HOXB3-209ENST00000478644 NUTM1Q86Y26 1132 aa10.03□□□□□ -0.8
HOXB3-209ENST00000478644 HLA-CQ95604 372 aa10.03□□□□□ -0.8
HOXB3-209ENST00000478644 ESF1Q9H501 851 aaKnown RBP10.03□□□□□ -0.8
HOXB3-209ENST00000478644 PDZRN3Q9UPQ7 1066 aa10.03□□□□□ -0.8
HOXB3-209ENST00000478644 Q6ZNB5 142 aa10.02□□□□□ -0.81
HOXB3-209ENST00000478644 PARP9Q8IXQ6 854 aa10.02□□□□□ -0.81
HOXB3-209ENST00000478644 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms