RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 TRIM32Q13049 653 aa11.31□□□□□ -0.6
CDK13-204ENST00000478563 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
CDK13-204ENST00000478563 GMPRP36959 345 aa11.3□□□□□ -0.6
CDK13-204ENST00000478563 FAM181BA6NEQ2 426 aa11.29□□□□□ -0.6
CDK13-204ENST00000478563 GJA5P36382 358 aa11.29□□□□□ -0.6
CDK13-204ENST00000478563 FLIIQ13045 1269 aa11.29□□□□□ -0.6
CDK13-204ENST00000478563 C6orf229H3BNL8 230 aa11.28□□□□□ -0.6
CDK13-204ENST00000478563 APBB1O00213 710 aa11.28□□□□□ -0.6
CDK13-204ENST00000478563 RSBN1LQ6PCB5 846 aaPredicted RBP11.28□□□□□ -0.6
CDK13-204ENST00000478563 KIFC2Q96AC6 838 aa11.28□□□□□ -0.6
CDK13-204ENST00000478563 ZSCAN1Q8NBB4 408 aa11.27□□□□□ -0.61
CDK13-204ENST00000478563 SPTLC1O15269 473 aa11.26□□□□□ -0.61
CDK13-204ENST00000478563 PTCRAQ6ISU1 281 aaPredicted RBP11.26□□□□□ -0.61
CDK13-204ENST00000478563 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
CDK13-204ENST00000478563 SLC16A10Q8TF71 515 aa11.26□□□□□ -0.61
CDK13-204ENST00000478563 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
CDK13-204ENST00000478563 SKOR1P84550 965 aa11.25□□□□□ -0.61
CDK13-204ENST00000478563 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
CDK13-204ENST00000478563 MTMR2Q13614 643 aa11.24□□□□□ -0.61
CDK13-204ENST00000478563 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
CDK13-204ENST00000478563 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
CDK13-204ENST00000478563 HRCP23327 699 aa11.23□□□□□ -0.61
CDK13-204ENST00000478563 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
CDK13-204ENST00000478563 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
CDK13-204ENST00000478563 SPDYE5A6NIY4 337 aa11.21□□□□□ -0.61
CDK13-204ENST00000478563 PTPRNQ16849 979 aa11.21□□□□□ -0.61
CDK13-204ENST00000478563 GOPCQ9HD26 462 aa11.21□□□□□ -0.61
CDK13-204ENST00000478563 CCNYL3P0C7X3 344 aa11.2□□□□□ -0.62
CDK13-204ENST00000478563 VEGFBP49765 207 aa11.2□□□□□ -0.62
CDK13-204ENST00000478563 WNT7BP56706 349 aa11.2□□□□□ -0.62
CDK13-204ENST00000478563 SUZ12Q15022 739 aaKnown RBP11.2□□□□□ -0.62
CDK13-204ENST00000478563 MYSM1Q5VVJ2 828 aa11.2□□□□□ -0.62
CDK13-204ENST00000478563 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
CDK13-204ENST00000478563 RANGAP1P46060 587 aaPredicted RBP11.19□□□□□ -0.62
CDK13-204ENST00000478563 PCMTD1Q96MG8 357 aaPredicted RBP11.19□□□□□ -0.62
CDK13-204ENST00000478563 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
CDK13-204ENST00000478563 LIMD1Q9UGP4 676 aa11.19□□□□□ -0.62
CDK13-204ENST00000478563 CFAP99D6REC4 459 aa11.18□□□□□ -0.62
CDK13-204ENST00000478563 RC3H1Q5TC82 1133 aaKnown RBP11.18□□□□□ -0.62
CDK13-204ENST00000478563 IRF7Q92985 503 aa11.18□□□□□ -0.62
CDK13-204ENST00000478563 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
CDK13-204ENST00000478563 TUSC1Q2TAM9 212 aa11.17□□□□□ -0.62
CDK13-204ENST00000478563 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
CDK13-204ENST00000478563 CLUAP1Q96AJ1 413 aa11.17□□□□□ -0.62
CDK13-204ENST00000478563 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
CDK13-204ENST00000478563 A6NJR5 290 aa11.15□□□□□ -0.62
CDK13-204ENST00000478563 KCNH2Q12809 1159 aa11.15□□□□□ -0.62
CDK13-204ENST00000478563 LYPD8Q6UX82 237 aa11.15□□□□□ -0.62
CDK13-204ENST00000478563 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
CDK13-204ENST00000478563 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
CDK13-204ENST00000478563 H3BM21 787 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 SIAH2O43255 324 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 BMP1P13497 986 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 SH3BP2P78314 561 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 QPCTQ16769 361 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 NPAS3Q8IXF0 933 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 UNC93B1Q9H1C4 597 aa11.14□□□□□ -0.63
CDK13-204ENST00000478563 TRAK2O60296 914 aa11.13□□□□□ -0.63
CDK13-204ENST00000478563 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
CDK13-204ENST00000478563 LILRB3O75022 631 aa11.12□□□□□ -0.63
CDK13-204ENST00000478563 ALDH1A1P00352 501 aa11.12□□□□□ -0.63
CDK13-204ENST00000478563 F12P00748 615 aaPredicted RBP11.11□□□□□ -0.63
CDK13-204ENST00000478563 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
CDK13-204ENST00000478563 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
CDK13-204ENST00000478563 PDIA4P13667 645 aaKnown RBP11.09□□□□□ -0.63
CDK13-204ENST00000478563 MCM6Q14566 821 aa11.09□□□□□ -0.63
CDK13-204ENST00000478563 BAP1Q92560 729 aa11.09□□□□□ -0.63
CDK13-204ENST00000478563 CLK2P49760 499 aaKnown RBP11.08□□□□□ -0.64
CDK13-204ENST00000478563 SH3D19Q5HYK7 790 aa11.08□□□□□ -0.64
CDK13-204ENST00000478563 LINC01559Q495D7 138 aa11.07□□□□□ -0.64
CDK13-204ENST00000478563 RTL5Q5HYW3 569 aaPredicted RBP11.07□□□□□ -0.64
CDK13-204ENST00000478563 MAP10Q9P2G4 905 aa11.07□□□□□ -0.64
CDK13-204ENST00000478563 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
CDK13-204ENST00000478563 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
CDK13-204ENST00000478563 CAPN5O15484 640 aaPredicted RBP11.05□□□□□ -0.64
CDK13-204ENST00000478563 FBXO31Q5XUX0 539 aaPredicted RBP11.05□□□□□ -0.64
CDK13-204ENST00000478563 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
CDK13-204ENST00000478563 POLR3EQ9NVU0 708 aa11.04□□□□□ -0.64
CDK13-204ENST00000478563 ATP1B4Q9UN42 357 aaPredicted RBP11.04□□□□□ -0.64
CDK13-204ENST00000478563 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
CDK13-204ENST00000478563 CTHP32929 405 aa11.02□□□□□ -0.65
CDK13-204ENST00000478563 GSK3AP49840 483 aa11.02□□□□□ -0.65
CDK13-204ENST00000478563 SKIV2LQ15477 1246 aaKnown RBP11.02□□□□□ -0.65
CDK13-204ENST00000478563 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
CDK13-204ENST00000478563 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.65
CDK13-204ENST00000478563 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
CDK13-204ENST00000478563 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
CDK13-204ENST00000478563 NUTM2DQ5VT03 806 aaPredicted RBP11.01□□□□□ -0.65
CDK13-204ENST00000478563 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
CDK13-204ENST00000478563 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
CDK13-204ENST00000478563 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
CDK13-204ENST00000478563 MPNDQ8N594 471 aa11□□□□□ -0.65
CDK13-204ENST00000478563 POM121Q96HA1 1249 aa11□□□□□ -0.65
CDK13-204ENST00000478563 GNL3Q9BVP2 549 aaKnown RBP eCLIP11□□□□□ -0.65
CDK13-204ENST00000478563 VARSP26640 1264 aaKnown RBP10.99□□□□□ -0.65
CDK13-204ENST00000478563 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
CDK13-204ENST00000478563 FOXJ1Q92949 421 aa10.99□□□□□ -0.65
CDK13-204ENST00000478563 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
CDK13-204ENST00000478563 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
CDK13-204ENST00000478563 RAD21O60216 631 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms