RNA–Protein interactions for RNA: ENST00000478548.1

MEN1-215, Transcript of menin 1, human

TSL 2

Gene MEN1, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEN1-215	ENST00000478548	MARF1	Q9Y4F3	1742 aa	Known RBP	33.64	■■■□□ 2.98
MEN1-215	ENST00000478548	CABLES1	Q8TDN4	633 aa		33.63	■■■□□ 2.97
MEN1-215	ENST00000478548	PAK3	O75914	559 aa	Predicted RBP	33.62	■■■□□ 2.97
MEN1-215	ENST00000478548	USP6	P35125	1406 aa		33.62	■■■□□ 2.97
MEN1-215	ENST00000478548	SSH2	Q76I76	1423 aa		33.62	■■■□□ 2.97
MEN1-215	ENST00000478548	CRYBG1	Q9Y4K1	1723 aa		33.62	■■■□□ 2.97
MEN1-215	ENST00000478548	AKAP12	Q02952	1782 aa		33.62	■■■□□ 2.97
MEN1-215	ENST00000478548	CPSF1	Q10570	1443 aa	Known RBP	33.61	■■■□□ 2.97
MEN1-215	ENST00000478548	SLC24A1	O60721	1099 aa		33.61	■■■□□ 2.97
MEN1-215	ENST00000478548	CD163L1	Q9NR16	1453 aa		33.6	■■■□□ 2.97
MEN1-215	ENST00000478548	PLEKHG5	O94827	1062 aa		33.59	■■■□□ 2.97
MEN1-215	ENST00000478548	BRD4	O60885	1362 aa	Predicted RBP	33.58	■■■□□ 2.97
MEN1-215	ENST00000478548	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.56	■■■□□ 2.96
MEN1-215	ENST00000478548	SLC12A5	Q9H2X9	1139 aa		33.55	■■■□□ 2.96
MEN1-215	ENST00000478548	HAP1	P54257	671 aa	Predicted RBP	33.54	■■■□□ 2.96
MEN1-215	ENST00000478548	TMF1	P82094	1093 aa		33.54	■■■□□ 2.96
MEN1-215	ENST00000478548	ZNF692	Q9BU19	519 aa	Predicted RBP	33.54	■■■□□ 2.96
MEN1-215	ENST00000478548	USP21	Q9UK80	565 aa		33.54	■■■□□ 2.96
MEN1-215	ENST00000478548	RXRB	P28702	533 aa		33.53	■■■□□ 2.96
MEN1-215	ENST00000478548	MON2	Q7Z3U7	1717 aa		33.53	■■■□□ 2.96
MEN1-215	ENST00000478548	NRK	Q7Z2Y5	1582 aa		33.53	■■■□□ 2.96
MEN1-215	ENST00000478548	QTRT2	Q9H974	415 aa	Known RBP	33.53	■■■□□ 2.96
MEN1-215	ENST00000478548	HSPA5	P11021	654 aa	Known RBP	33.5	■■■□□ 2.95
MEN1-215	ENST00000478548	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.5	■■■□□ 2.95
MEN1-215	ENST00000478548	NUTM2G	Q5VZR2	741 aa		33.5	■■■□□ 2.95
MEN1-215	ENST00000478548	ABTB2	Q8N961	1025 aa		33.5	■■■□□ 2.95
MEN1-215	ENST00000478548	TMC1	Q8TDI8	760 aa		33.5	■■■□□ 2.95
MEN1-215	ENST00000478548	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.49	■■■□□ 2.95
MEN1-215	ENST00000478548	BCL9L	Q86UU0	1499 aa		33.49	■■■□□ 2.95
MEN1-215	ENST00000478548	KTN1	Q86UP2	1357 aa	Known RBP	33.48	■■■□□ 2.95
MEN1-215	ENST00000478548	PIK3C2A	O00443	1686 aa		33.47	■■■□□ 2.95
MEN1-215	ENST00000478548	TTC21B	Q7Z4L5	1316 aa		33.47	■■■□□ 2.95
MEN1-215	ENST00000478548	NINL	Q9Y2I6	1382 aa		33.46	■■■□□ 2.95
MEN1-215	ENST00000478548	SLIT2	O94813	1529 aa		33.46	■■■□□ 2.95
MEN1-215	ENST00000478548	ATRN	O75882	1429 aa		33.46	■■■□□ 2.95
MEN1-215	ENST00000478548	USP19	O94966	1318 aa		33.45	■■■□□ 2.95
MEN1-215	ENST00000478548	RBM6	P78332	1123 aa	Known RBP	33.45	■■■□□ 2.95
MEN1-215	ENST00000478548	TRPC5	Q9UL62	973 aa	Predicted RBP	33.45	■■■□□ 2.95
MEN1-215	ENST00000478548		A0A1W2PP64	1363 aa		33.44	■■■□□ 2.94
MEN1-215	ENST00000478548	CDK12	Q9NYV4	1490 aa	Predicted RBP	33.44	■■■□□ 2.94
MEN1-215	ENST00000478548	FAM83G	A6ND36	823 aa		33.43	■■■□□ 2.94
MEN1-215	ENST00000478548	CDCA8	Q53HL2	280 aa		33.41	■■■□□ 2.94
MEN1-215	ENST00000478548	NLRP13	Q86W25	1043 aa		33.41	■■■□□ 2.94
MEN1-215	ENST00000478548	TTC21A	Q8NDW8	1320 aa		33.41	■■■□□ 2.94
MEN1-215	ENST00000478548	RGS12	O14924	1447 aa		33.41	■■■□□ 2.94
MEN1-215	ENST00000478548	PLCH1	Q4KWH8	1693 aa		33.4	■■■□□ 2.94
MEN1-215	ENST00000478548	TERF2IP	Q9NYB0	399 aa		33.4	■■■□□ 2.94
MEN1-215	ENST00000478548	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.39	■■■□□ 2.94
MEN1-215	ENST00000478548	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.39	■■■□□ 2.94
MEN1-215	ENST00000478548	MYOM1	P52179	1685 aa		33.38	■■■□□ 2.93
MEN1-215	ENST00000478548	SLIT3	O75094	1523 aa		33.37	■■■□□ 2.93
MEN1-215	ENST00000478548	NLRP6	P59044	892 aa		33.37	■■■□□ 2.93
MEN1-215	ENST00000478548	UNC5CL	Q8IV45	518 aa		33.37	■■■□□ 2.93
MEN1-215	ENST00000478548	NWD2	Q9ULI1	1742 aa		33.36	■■■□□ 2.93
MEN1-215	ENST00000478548	EDC4	Q6P2E9	1401 aa	Known RBP	33.36	■■■□□ 2.93
MEN1-215	ENST00000478548	COL14A1	Q05707	1796 aa	Known RBP	33.36	■■■□□ 2.93
MEN1-215	ENST00000478548	ANKRD36B	Q8N2N9	1353 aa		33.34	■■■□□ 2.93
MEN1-215	ENST00000478548	GC	P02774	474 aa		33.34	■■■□□ 2.93
MEN1-215	ENST00000478548	KIAA0232	Q92628	1395 aa		33.34	■■■□□ 2.93
MEN1-215	ENST00000478548	USP54	Q70EL1	1684 aa		33.33	■■■□□ 2.93
MEN1-215	ENST00000478548	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.32	■■■□□ 2.93
MEN1-215	ENST00000478548	ZRANB1	Q9UGI0	708 aa		33.32	■■■□□ 2.93
MEN1-215	ENST00000478548	USP31	Q70CQ4	1352 aa		33.32	■■■□□ 2.92
MEN1-215	ENST00000478548	C11orf95	C9JLR9	678 aa	Predicted RBP	33.31	■■■□□ 2.92
MEN1-215	ENST00000478548	ZC3H6	P61129	1189 aa	Known RBP	33.31	■■■□□ 2.92
MEN1-215	ENST00000478548	CPD	O75976	1380 aa		33.31	■■■□□ 2.92
MEN1-215	ENST00000478548	NRAP	Q86VF7	1730 aa		33.31	■■■□□ 2.92
MEN1-215	ENST00000478548	NME9	Q86XW9	330 aa		33.3	■■■□□ 2.92
MEN1-215	ENST00000478548	GJD4	Q96KN9	370 aa	Predicted RBP	33.29	■■■□□ 2.92
MEN1-215	ENST00000478548	PRDM11	Q9NQV5	511 aa		33.28	■■■□□ 2.92
MEN1-215	ENST00000478548	CHRNA2	Q15822	529 aa		33.27	■■■□□ 2.92
MEN1-215	ENST00000478548	BTG4	Q9NY30	223 aa		33.27	■■■□□ 2.92
MEN1-215	ENST00000478548	GLI3	P10071	1580 aa		33.26	■■■□□ 2.92
MEN1-215	ENST00000478548	LMO7	Q8WWI1	1683 aa		33.25	■■■□□ 2.91
MEN1-215	ENST00000478548	VPS72	Q15906	364 aa		33.25	■■■□□ 2.91
MEN1-215	ENST00000478548	CARD14	Q9BXL6	1004 aa		33.23	■■■□□ 2.91
MEN1-215	ENST00000478548	NFAT5	O94916	1531 aa		33.23	■■■□□ 2.91
MEN1-215	ENST00000478548	OVOS2	A0A0J9YW53	1432 aa		33.22	■■■□□ 2.91
MEN1-215	ENST00000478548	OVOS2	Q6IE36	1432 aa		33.22	■■■□□ 2.91
MEN1-215	ENST00000478548	CAMTA1	Q9Y6Y1	1673 aa		33.21	■■■□□ 2.91
MEN1-215	ENST00000478548	COL18A1	P39060	1754 aa		33.2	■■■□□ 2.91
MEN1-215	ENST00000478548	KCNH5	Q8NCM2	988 aa		33.2	■■■□□ 2.91
MEN1-215	ENST00000478548	CCDC9	Q9Y3X0	531 aa	Known RBP	33.19	■■■□□ 2.9
MEN1-215	ENST00000478548	ARHGEF25	Q86VW2	580 aa		33.17	■■■□□ 2.9
MEN1-215	ENST00000478548	POLR3GL	Q9BT43	218 aa		33.16	■■■□□ 2.9
MEN1-215	ENST00000478548	FYB1	O15117	783 aa		33.15	■■■□□ 2.9
MEN1-215	ENST00000478548	AATK	Q6ZMQ8	1374 aa		33.15	■■■□□ 2.9
MEN1-215	ENST00000478548	SOX12	O15370	315 aa		33.13	■■■□□ 2.89
MEN1-215	ENST00000478548	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.13	■■■□□ 2.89
MEN1-215	ENST00000478548	KIF7	Q2M1P5	1343 aa		33.13	■■■□□ 2.89
MEN1-215	ENST00000478548	NSD3	Q9BZ95	1437 aa		33.12	■■■□□ 2.89
MEN1-215	ENST00000478548	KIF20B	Q96Q89	1820 aa		33.1	■■■□□ 2.89
MEN1-215	ENST00000478548	AXIN2	Q9Y2T1	843 aa		33.1	■■■□□ 2.89
MEN1-215	ENST00000478548	SPATA31A5	Q5VU36	1347 aa		33.09	■■■□□ 2.89
MEN1-215	ENST00000478548	SPATA31A7	Q8IWB4	1347 aa		33.09	■■■□□ 2.89
MEN1-215	ENST00000478548	COL5A2	P05997	1499 aa	Predicted RBP	33.09	■■■□□ 2.89
MEN1-215	ENST00000478548	ONECUT3	O60422	494 aa	Predicted RBP	33.08	■■■□□ 2.89
MEN1-215	ENST00000478548	GGNBP2	Q9H3C7	697 aa		33.08	■■■□□ 2.89
MEN1-215	ENST00000478548	RGPD5	Q99666	1765 aa		33.07	■■■□□ 2.89
MEN1-215	ENST00000478548	STRN4	Q9NRL3	753 aa		33.07	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms