RNA–Protein interactions for RNA: ENST00000478499.3

RN7SL259P-201, Transcript of RNA, 7SL, cytoplasmic 259, pseudogene, humanhuman

BASIC

Gene RN7SL259P, Length 253 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL259P-201ENST00000478499 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
RN7SL259P-201ENST00000478499 ESCO1Q5FWF5 840 aa10.91□□□□□ -0.66
RN7SL259P-201ENST00000478499 CCDC144AA2RUR9 1427 aa10.91□□□□□ -0.66
RN7SL259P-201ENST00000478499 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
RN7SL259P-201ENST00000478499 ROBO2Q9HCK4 1378 aa10.9□□□□□ -0.66
RN7SL259P-201ENST00000478499 YBX3P16989 372 aaKnown RBP eCLIP10.9□□□□□ -0.66
RN7SL259P-201ENST00000478499 BTG4Q9NY30 223 aa10.9□□□□□ -0.66
RN7SL259P-201ENST00000478499 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
RN7SL259P-201ENST00000478499 CHGAP10645 457 aaKnown RBP10.88□□□□□ -0.67
RN7SL259P-201ENST00000478499 COL14A1Q05707 1796 aaKnown RBP10.88□□□□□ -0.67
RN7SL259P-201ENST00000478499 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
RN7SL259P-201ENST00000478499 KANK4Q5T7N3 995 aaPredicted RBP10.87□□□□□ -0.67
RN7SL259P-201ENST00000478499 PROM2Q8N271 834 aa10.87□□□□□ -0.67
RN7SL259P-201ENST00000478499 RRP7BPQ9NSQ0 103 aa10.87□□□□□ -0.67
RN7SL259P-201ENST00000478499 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
RN7SL259P-201ENST00000478499 TOMM70O94826 608 aa10.86□□□□□ -0.67
RN7SL259P-201ENST00000478499 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
RN7SL259P-201ENST00000478499 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
RN7SL259P-201ENST00000478499 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
RN7SL259P-201ENST00000478499 ZNF526Q8TF50 670 aaPredicted RBP10.86□□□□□ -0.67
RN7SL259P-201ENST00000478499 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
RN7SL259P-201ENST00000478499 HTRA3P83110 453 aa10.85□□□□□ -0.67
RN7SL259P-201ENST00000478499 SLC15A2Q16348 729 aa10.85□□□□□ -0.67
RN7SL259P-201ENST00000478499 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
RN7SL259P-201ENST00000478499 NLGN2Q8NFZ4 835 aa10.84□□□□□ -0.67
RN7SL259P-201ENST00000478499 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
RN7SL259P-201ENST00000478499 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
RN7SL259P-201ENST00000478499 SBNO1A3KN83 1393 aa10.83□□□□□ -0.68
RN7SL259P-201ENST00000478499 ARHGEF10O15013 1369 aa10.83□□□□□ -0.68
RN7SL259P-201ENST00000478499 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
RN7SL259P-201ENST00000478499 KIF1AQ12756 1690 aa10.82□□□□□ -0.68
RN7SL259P-201ENST00000478499 PEAK1Q9H792 1746 aa10.82□□□□□ -0.68
RN7SL259P-201ENST00000478499 C11orf95C9JLR9 678 aaPredicted RBP10.82□□□□□ -0.68
RN7SL259P-201ENST00000478499 BARGINQ6ZT62 677 aa10.82□□□□□ -0.68
RN7SL259P-201ENST00000478499 STK32BQ9NY57 414 aa10.82□□□□□ -0.68
RN7SL259P-201ENST00000478499 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
RN7SL259P-201ENST00000478499 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
RN7SL259P-201ENST00000478499 RGS19P49795 217 aa10.81□□□□□ -0.68
RN7SL259P-201ENST00000478499 PDE3BQ13370 1112 aa10.81□□□□□ -0.68
RN7SL259P-201ENST00000478499 KRT28Q7Z3Y7 464 aa10.81□□□□□ -0.68
RN7SL259P-201ENST00000478499 TULP4Q9NRJ4 1543 aa10.8□□□□□ -0.68
RN7SL259P-201ENST00000478499 TECPR2O15040 1411 aa10.8□□□□□ -0.68
RN7SL259P-201ENST00000478499 MLLT1Q03111 559 aaPredicted RBP10.79□□□□□ -0.68
RN7SL259P-201ENST00000478499 OVOS2A0A0G2JMS6 1433 aa10.78□□□□□ -0.68
RN7SL259P-201ENST00000478499 OVOS2A0A0J9YW53 1432 aa10.78□□□□□ -0.68
RN7SL259P-201ENST00000478499 OVOS2Q6IE36 1432 aa10.78□□□□□ -0.68
RN7SL259P-201ENST00000478499 ARHGEF28Q8N1W1 1705 aaKnown RBP10.78□□□□□ -0.68
RN7SL259P-201ENST00000478499 PAPPAQ13219 1627 aa10.77□□□□□ -0.68
RN7SL259P-201ENST00000478499 MYOM3Q5VTT5 1437 aa10.77□□□□□ -0.68
RN7SL259P-201ENST00000478499 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
RN7SL259P-201ENST00000478499 NAIPQ13075 1403 aa10.76□□□□□ -0.69
RN7SL259P-201ENST00000478499 USP19O94966 1318 aa10.76□□□□□ -0.69
RN7SL259P-201ENST00000478499 TXNRD1Q16881 649 aa10.75□□□□□ -0.69
RN7SL259P-201ENST00000478499 PTF1AQ7RTS3 328 aa10.75□□□□□ -0.69
RN7SL259P-201ENST00000478499 BCL9O00512 1426 aa10.75□□□□□ -0.69
RN7SL259P-201ENST00000478499 ATP7BP35670 1465 aa10.74□□□□□ -0.69
RN7SL259P-201ENST00000478499 PSME1Q06323 249 aa10.74□□□□□ -0.69
RN7SL259P-201ENST00000478499 FSTL1Q12841 308 aa10.74□□□□□ -0.69
RN7SL259P-201ENST00000478499 PARP4Q9UKK3 1724 aaKnown RBP10.74□□□□□ -0.69
RN7SL259P-201ENST00000478499 NRXN1Q9ULB1 1477 aa10.74□□□□□ -0.69
RN7SL259P-201ENST00000478499 TNRC18O15417 2968 aaPredicted RBP10.74□□□□□ -0.69
RN7SL259P-201ENST00000478499 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
RN7SL259P-201ENST00000478499 PRDM10Q9NQV6 1147 aa10.73□□□□□ -0.69
RN7SL259P-201ENST00000478499 CRYBG1Q9Y4K1 1723 aa10.72□□□□□ -0.69
RN7SL259P-201ENST00000478499 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
RN7SL259P-201ENST00000478499 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
RN7SL259P-201ENST00000478499 POLD1P28340 1107 aa10.71□□□□□ -0.69
RN7SL259P-201ENST00000478499 SSH2Q76I76 1423 aa10.71□□□□□ -0.69
RN7SL259P-201ENST00000478499 ABHD8Q96I13 439 aa10.71□□□□□ -0.69
RN7SL259P-201ENST00000478499 FMN2Q9NZ56 1722 aa10.71□□□□□ -0.69
RN7SL259P-201ENST00000478499 SBF2Q86WG5 1849 aa10.7□□□□□ -0.7
RN7SL259P-201ENST00000478499 TOPAZ1Q8N9V7 1692 aa10.7□□□□□ -0.7
RN7SL259P-201ENST00000478499 PHRF1Q9P1Y6 1649 aaKnown RBP10.7□□□□□ -0.7
RN7SL259P-201ENST00000478499 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
RN7SL259P-201ENST00000478499 NUTM2FA1L443 756 aa10.69□□□□□ -0.7
RN7SL259P-201ENST00000478499 APLP2Q06481 763 aa10.68□□□□□ -0.7
RN7SL259P-201ENST00000478499 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
RN7SL259P-201ENST00000478499 PRDM11Q9NQV5 511 aa10.68□□□□□ -0.7
RN7SL259P-201ENST00000478499 THRAP3Q9Y2W1 955 aaKnown RBP10.68□□□□□ -0.7
RN7SL259P-201ENST00000478499 E9PCH4 1651 aa10.68□□□□□ -0.7
RN7SL259P-201ENST00000478499 ALS2Q96Q42 1657 aa10.68□□□□□ -0.7
RN7SL259P-201ENST00000478499 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 TRPM3Q9HCF6 1732 aaPredicted RBP10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 ZEB1P37275 1124 aaPredicted RBP10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 ZNF827Q17R98 1081 aa10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 NMRK2Q9NPI5 230 aa10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
RN7SL259P-201ENST00000478499 USP35Q9P2H5 1018 aa10.66□□□□□ -0.7
RN7SL259P-201ENST00000478499 DAPK1P53355 1430 aa10.66□□□□□ -0.7
RN7SL259P-201ENST00000478499 LRRC37A3O60309 1634 aa10.66□□□□□ -0.7
RN7SL259P-201ENST00000478499 KIAA0232Q92628 1395 aa10.65□□□□□ -0.7
RN7SL259P-201ENST00000478499 FOXN1O15353 648 aa10.65□□□□□ -0.7
RN7SL259P-201ENST00000478499 STRN4Q9NRL3 753 aa10.65□□□□□ -0.7
RN7SL259P-201ENST00000478499 PDE4DIPQ5VU43 2346 aa10.65□□□□□ -0.7
RN7SL259P-201ENST00000478499 ANKRD30AQ9BXX3 1397 aa10.65□□□□□ -0.71
RN7SL259P-201ENST00000478499 QSER1Q2KHR3 1735 aa10.64□□□□□ -0.71
RN7SL259P-201ENST00000478499 FAM50AQ14320 339 aaKnown RBP10.64□□□□□ -0.71
RN7SL259P-201ENST00000478499 PMFBP1Q8TBY8 1022 aa10.63□□□□□ -0.71
RN7SL259P-201ENST00000478499 LARP1Q6PKG0 1096 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms