RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
MSL3-214ENST00000478462 CCDC61Q9Y6R9 512 aa10.64□□□□□ -0.71
MSL3-214ENST00000478462 ANKARQ7Z5J8 1434 aa10.64□□□□□ -0.71
MSL3-214ENST00000478462 USP32Q8NFA0 1604 aa10.63□□□□□ -0.71
MSL3-214ENST00000478462 EVX2Q03828 476 aa10.63□□□□□ -0.71
MSL3-214ENST00000478462 PMFBP1Q8TBY8 1022 aa10.63□□□□□ -0.71
MSL3-214ENST00000478462 PRR36Q9H6K5 1346 aa10.62□□□□□ -0.71
MSL3-214ENST00000478462 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
MSL3-214ENST00000478462 FOXO3O43524 673 aa10.62□□□□□ -0.71
MSL3-214ENST00000478462 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
MSL3-214ENST00000478462 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
MSL3-214ENST00000478462 NGDNQ8NEJ9 315 aaKnown RBP10.62□□□□□ -0.71
MSL3-214ENST00000478462 KIF1AQ12756 1690 aa10.62□□□□□ -0.71
MSL3-214ENST00000478462 HSPA1LP34931 641 aa10.61□□□□□ -0.71
MSL3-214ENST00000478462 PSME1Q06323 249 aa10.61□□□□□ -0.71
MSL3-214ENST00000478462 TMC1Q8TDI8 760 aa10.61□□□□□ -0.71
MSL3-214ENST00000478462 DDX17Q92841 729 aaKnown RBP10.61□□□□□ -0.71
MSL3-214ENST00000478462 POLR3GLQ9BT43 218 aa10.61□□□□□ -0.71
MSL3-214ENST00000478462 ATP7BP35670 1465 aa10.61□□□□□ -0.71
MSL3-214ENST00000478462 NPHP3Q7Z494 1330 aa10.6□□□□□ -0.71
MSL3-214ENST00000478462 PUS7Q96PZ0 661 aaKnown RBP10.6□□□□□ -0.71
MSL3-214ENST00000478462 CABP1Q9NZU7 370 aa10.6□□□□□ -0.71
MSL3-214ENST00000478462 ATAD2Q6PL18 1390 aa10.6□□□□□ -0.71
MSL3-214ENST00000478462 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
MSL3-214ENST00000478462 NHSL1Q5SYE7 1610 aa10.59□□□□□ -0.71
MSL3-214ENST00000478462 PLEKHG3A1L390 1219 aa10.59□□□□□ -0.71
MSL3-214ENST00000478462 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
MSL3-214ENST00000478462 XPCQ01831 940 aaPredicted RBP10.59□□□□□ -0.71
MSL3-214ENST00000478462 DISP3Q9P2K9 1392 aa10.59□□□□□ -0.71
MSL3-214ENST00000478462 TOPAZ1Q8N9V7 1692 aa10.59□□□□□ -0.71
MSL3-214ENST00000478462 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
MSL3-214ENST00000478462 KRT28Q7Z3Y7 464 aa10.58□□□□□ -0.72
MSL3-214ENST00000478462 ACEP12821 1306 aa10.58□□□□□ -0.72
MSL3-214ENST00000478462 LRRC59Q96AG4 307 aaKnown RBP10.57□□□□□ -0.72
MSL3-214ENST00000478462 SLC12A5Q9H2X9 1139 aa10.57□□□□□ -0.72
MSL3-214ENST00000478462 SOS2Q07890 1332 aaPredicted RBP10.57□□□□□ -0.72
MSL3-214ENST00000478462 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
MSL3-214ENST00000478462 LMOD2Q6P5Q4 547 aa10.56□□□□□ -0.72
MSL3-214ENST00000478462 TERF2IPQ9NYB0 399 aa10.56□□□□□ -0.72
MSL3-214ENST00000478462 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
MSL3-214ENST00000478462 AKAP12Q02952 1782 aa10.55□□□□□ -0.72
MSL3-214ENST00000478462 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
MSL3-214ENST00000478462 HDGFL2Q7Z4V5 671 aaPredicted RBP10.55□□□□□ -0.72
MSL3-214ENST00000478462 POLR3AO14802 1390 aaPredicted RBP10.54□□□□□ -0.72
MSL3-214ENST00000478462 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
MSL3-214ENST00000478462 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
MSL3-214ENST00000478462 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
MSL3-214ENST00000478462 PXDNQ92626 1479 aa10.54□□□□□ -0.72
MSL3-214ENST00000478462 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
MSL3-214ENST00000478462 SPATA31A3Q5VYP0 1347 aa10.53□□□□□ -0.72
MSL3-214ENST00000478462 SBNO1A3KN83 1393 aa10.52□□□□□ -0.72
MSL3-214ENST00000478462 JCADQ9P266 1359 aa10.52□□□□□ -0.72
MSL3-214ENST00000478462 PLEKHG5O94827 1062 aa10.52□□□□□ -0.73
MSL3-214ENST00000478462 MIER1Q8N108 512 aa10.52□□□□□ -0.73
MSL3-214ENST00000478462 TRPM3Q9HCF6 1732 aaPredicted RBP10.52□□□□□ -0.73
MSL3-214ENST00000478462 KIF7Q2M1P5 1343 aa10.52□□□□□ -0.73
MSL3-214ENST00000478462 USP6P35125 1406 aa10.51□□□□□ -0.73
MSL3-214ENST00000478462 MON2Q7Z3U7 1717 aa10.51□□□□□ -0.73
MSL3-214ENST00000478462 PLCD3Q8N3E9 789 aa10.51□□□□□ -0.73
MSL3-214ENST00000478462 ABTB2Q8N961 1025 aa10.51□□□□□ -0.73
MSL3-214ENST00000478462 BRD4O60885 1362 aaPredicted RBP10.51□□□□□ -0.73
MSL3-214ENST00000478462 MYOM1P52179 1685 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 SHPRHQ149N8 1683 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
MSL3-214ENST00000478462 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
MSL3-214ENST00000478462 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
MSL3-214ENST00000478462 HAP1P54257 671 aaPredicted RBP10.5□□□□□ -0.73
MSL3-214ENST00000478462 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
MSL3-214ENST00000478462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.5□□□□□ -0.73
MSL3-214ENST00000478462 A0A1W2PP64 1363 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 ANKRD36BQ8N2N9 1353 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
MSL3-214ENST00000478462 CD163L1Q9NR16 1453 aa10.49□□□□□ -0.73
MSL3-214ENST00000478462 NUTM2GQ5VZR2 741 aa10.49□□□□□ -0.73
MSL3-214ENST00000478462 ALS2Q96Q42 1657 aa10.49□□□□□ -0.73
MSL3-214ENST00000478462 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
MSL3-214ENST00000478462 TTC21BQ7Z4L5 1316 aa10.49□□□□□ -0.73
MSL3-214ENST00000478462 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
MSL3-214ENST00000478462 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
MSL3-214ENST00000478462 NLRP6P59044 892 aa10.48□□□□□ -0.73
MSL3-214ENST00000478462 NLRP13Q86W25 1043 aa10.48□□□□□ -0.73
MSL3-214ENST00000478462 PANK3Q9H999 370 aa10.48□□□□□ -0.73
MSL3-214ENST00000478462 SPATA31A6Q5VVP1 1343 aa10.48□□□□□ -0.73
MSL3-214ENST00000478462 TTC21AQ8NDW8 1320 aa10.48□□□□□ -0.73
MSL3-214ENST00000478462 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
MSL3-214ENST00000478462 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
MSL3-214ENST00000478462 EDC4Q6P2E9 1401 aaKnown RBP10.47□□□□□ -0.73
MSL3-214ENST00000478462 SSH2Q76I76 1423 aa10.47□□□□□ -0.73
MSL3-214ENST00000478462 COL22A1Q8NFW1 1626 aaPredicted RBP10.47□□□□□ -0.73
MSL3-214ENST00000478462 ADAMTS2O95450 1211 aa10.46□□□□□ -0.73
MSL3-214ENST00000478462 NME9Q86XW9 330 aa10.46□□□□□ -0.73
MSL3-214ENST00000478462 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
MSL3-214ENST00000478462 NRKQ7Z2Y5 1582 aa10.46□□□□□ -0.74
MSL3-214ENST00000478462 KIF20BQ96Q89 1820 aa10.45□□□□□ -0.74
MSL3-214ENST00000478462 PIK3C2AO00443 1686 aa10.45□□□□□ -0.74
MSL3-214ENST00000478462 KNSTRNQ9Y448 316 aa10.45□□□□□ -0.74
MSL3-214ENST00000478462 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
MSL3-214ENST00000478462 NSD3Q9BZ95 1437 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms