RNA–Protein interactions for RNA: ENST00000478405.1

SPIN3-203, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 1,620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-203ENST00000478405 KIF7Q2M1P5 1343 aa24.34■■□□□ 1.49
SPIN3-203ENST00000478405 ABTB2Q8N961 1025 aa24.34■■□□□ 1.49
SPIN3-203ENST00000478405 CD163L1Q9NR16 1453 aa24.33■■□□□ 1.49
SPIN3-203ENST00000478405 ARHGEF10O15013 1369 aa24.33■■□□□ 1.49
SPIN3-203ENST00000478405 BRD4O60885 1362 aaPredicted RBP24.33■■□□□ 1.49
SPIN3-203ENST00000478405 TTC21BQ7Z4L5 1316 aa24.33■■□□□ 1.48
SPIN3-203ENST00000478405 NUTM2GQ5VZR2 741 aa24.32■■□□□ 1.48
SPIN3-203ENST00000478405 A0A1W2PP64 1363 aa24.32■■□□□ 1.48
SPIN3-203ENST00000478405 CABLES1Q8TDN4 633 aa24.32■■□□□ 1.48
SPIN3-203ENST00000478405 SSH2Q76I76 1423 aa24.31■■□□□ 1.48
SPIN3-203ENST00000478405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.31■■□□□ 1.48
SPIN3-203ENST00000478405 ANKRD36BQ8N2N9 1353 aa24.3■■□□□ 1.48
SPIN3-203ENST00000478405 WASHC2AQ641Q2 1341 aa24.28■■□□□ 1.48
SPIN3-203ENST00000478405 NLRP6P59044 892 aa24.28■■□□□ 1.48
SPIN3-203ENST00000478405 TTC21AQ8NDW8 1320 aa24.27■■□□□ 1.48
SPIN3-203ENST00000478405 NLRP13Q86W25 1043 aa24.27■■□□□ 1.48
SPIN3-203ENST00000478405 CARD14Q9BXL6 1004 aa24.27■■□□□ 1.48
SPIN3-203ENST00000478405 ADAMTS2O95450 1211 aa24.26■■□□□ 1.47
SPIN3-203ENST00000478405 HAP1P54257 671 aaPredicted RBP24.26■■□□□ 1.47
SPIN3-203ENST00000478405 CCDC7Q96M83 1385 aa24.26■■□□□ 1.47
SPIN3-203ENST00000478405 TRPM3Q9HCF6 1732 aaPredicted RBP24.25■■□□□ 1.47
SPIN3-203ENST00000478405 PANK3Q9H999 370 aa24.25■■□□□ 1.47
SPIN3-203ENST00000478405 EDC4Q6P2E9 1401 aaKnown RBP24.24■■□□□ 1.47
SPIN3-203ENST00000478405 MEX3CQ5U5Q3 659 aaKnown RBP24.24■■□□□ 1.47
SPIN3-203ENST00000478405 NME9Q86XW9 330 aa24.24■■□□□ 1.47
SPIN3-203ENST00000478405 SHPRHQ149N8 1683 aa24.24■■□□□ 1.47
SPIN3-203ENST00000478405 ZRANB1Q9UGI0 708 aa24.23■■□□□ 1.47
SPIN3-203ENST00000478405 LRP6O75581 1613 aa24.21■■□□□ 1.47
SPIN3-203ENST00000478405 GCP02774 474 aa24.19■■□□□ 1.46
SPIN3-203ENST00000478405 ALS2Q96Q42 1657 aa24.19■■□□□ 1.46
SPIN3-203ENST00000478405 AKAP12Q02952 1782 aa24.18■■□□□ 1.46
SPIN3-203ENST00000478405 FYB1O15117 783 aa24.18■■□□□ 1.46
SPIN3-203ENST00000478405 C8orf37Q96NL8 207 aa24.18■■□□□ 1.46
SPIN3-203ENST00000478405 COL22A1Q8NFW1 1626 aaPredicted RBP24.18■■□□□ 1.46
SPIN3-203ENST00000478405 USP19O94966 1318 aa24.18■■□□□ 1.46
SPIN3-203ENST00000478405 NGLY1Q96IV0 654 aa24.17■■□□□ 1.46
SPIN3-203ENST00000478405 NSD3Q9BZ95 1437 aa24.16■■□□□ 1.46
SPIN3-203ENST00000478405 ZC3H6P61129 1189 aaKnown RBP24.16■■□□□ 1.46
SPIN3-203ENST00000478405 USP31Q70CQ4 1352 aa24.15■■□□□ 1.46
SPIN3-203ENST00000478405 MYOM1P52179 1685 aa24.15■■□□□ 1.46
SPIN3-203ENST00000478405 GGNBP2Q9H3C7 697 aa24.15■■□□□ 1.46
SPIN3-203ENST00000478405 MED1Q15648 1581 aaPredicted RBP24.14■■□□□ 1.46
SPIN3-203ENST00000478405 MON2Q7Z3U7 1717 aa24.14■■□□□ 1.46
SPIN3-203ENST00000478405 COG3Q96JB2 828 aa24.14■■□□□ 1.46
SPIN3-203ENST00000478405 FAM83GA6ND36 823 aa24.13■■□□□ 1.45
SPIN3-203ENST00000478405 SOX12O15370 315 aa24.13■■□□□ 1.45
SPIN3-203ENST00000478405 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
SPIN3-203ENST00000478405 KCNH5Q8NCM2 988 aa24.13■■□□□ 1.45
SPIN3-203ENST00000478405 KNSTRNQ9Y448 316 aa24.13■■□□□ 1.45
SPIN3-203ENST00000478405 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
SPIN3-203ENST00000478405 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
SPIN3-203ENST00000478405 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
SPIN3-203ENST00000478405 PRDM11Q9NQV5 511 aa24.1■■□□□ 1.45
SPIN3-203ENST00000478405 PIK3C2AO00443 1686 aa24.1■■□□□ 1.45
SPIN3-203ENST00000478405 FNBP4Q8N3X1 1017 aaPredicted RBP24.1■■□□□ 1.45
SPIN3-203ENST00000478405 KIAA0232Q92628 1395 aa24.09■■□□□ 1.45
SPIN3-203ENST00000478405 RGS17Q9UGC6 210 aaPredicted RBP24.09■■□□□ 1.45
SPIN3-203ENST00000478405 AFF2P51816 1311 aa24.08■■□□□ 1.45
SPIN3-203ENST00000478405 CHRNA2Q15822 529 aa24.08■■□□□ 1.45
SPIN3-203ENST00000478405 OVOS2A0A0J9YW53 1432 aa24.07■■□□□ 1.44
SPIN3-203ENST00000478405 OVOS2Q6IE36 1432 aa24.07■■□□□ 1.44
SPIN3-203ENST00000478405 ZBTB7CA1YPR0 619 aa24.06■■□□□ 1.44
SPIN3-203ENST00000478405 USP21Q9UK80 565 aa24.06■■□□□ 1.44
SPIN3-203ENST00000478405 FBLN1P23142 703 aa24.05■■□□□ 1.44
SPIN3-203ENST00000478405 ARHGEF25Q86VW2 580 aa24.05■■□□□ 1.44
SPIN3-203ENST00000478405 CPDO75976 1380 aa24.05■■□□□ 1.44
SPIN3-203ENST00000478405 ZNF316A6NFI3 1004 aaPredicted RBP24.04■■□□□ 1.44
SPIN3-203ENST00000478405 ZNF772Q68DY9 489 aaPredicted RBP24.04■■□□□ 1.44
SPIN3-203ENST00000478405 SLIT3O75094 1523 aa24.04■■□□□ 1.44
SPIN3-203ENST00000478405 AMER1Q5JTC6 1135 aaPredicted RBP24.03■■□□□ 1.44
SPIN3-203ENST00000478405 BTG4Q9NY30 223 aa24.03■■□□□ 1.44
SPIN3-203ENST00000478405 DDX10Q13206 875 aaKnown RBP24.02■■□□□ 1.44
SPIN3-203ENST00000478405 UNC5CLQ8IV45 518 aa24.01■■□□□ 1.43
SPIN3-203ENST00000478405 QTRT2Q9H974 415 aaKnown RBP24■■□□□ 1.43
SPIN3-203ENST00000478405 CRYBG1Q9Y4K1 1723 aa24■■□□□ 1.43
SPIN3-203ENST00000478405 ABCA3Q99758 1704 aa23.99■■□□□ 1.43
SPIN3-203ENST00000478405 PHRF1Q9P1Y6 1649 aaKnown RBP23.99■■□□□ 1.43
SPIN3-203ENST00000478405 SLIT2O94813 1529 aa23.99■■□□□ 1.43
SPIN3-203ENST00000478405 BCL9LQ86UU0 1499 aa23.99■■□□□ 1.43
SPIN3-203ENST00000478405 POTEAQ6S8J7 498 aa23.99■■□□□ 1.43
SPIN3-203ENST00000478405 AXIN2Q9Y2T1 843 aa23.99■■□□□ 1.43
SPIN3-203ENST00000478405 TNNT2P45379 298 aaPredicted RBP23.98■■□□□ 1.43
SPIN3-203ENST00000478405 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
SPIN3-203ENST00000478405 CC2D1BQ5T0F9 858 aaKnown RBP23.98■■□□□ 1.43
SPIN3-203ENST00000478405 MORC1Q86VD1 984 aa23.98■■□□□ 1.43
SPIN3-203ENST00000478405 NSD2O96028 1365 aa23.97■■□□□ 1.43
SPIN3-203ENST00000478405 AATKQ6ZMQ8 1374 aa23.97■■□□□ 1.43
SPIN3-203ENST00000478405 RRS1Q15050 365 aaKnown RBP23.97■■□□□ 1.43
SPIN3-203ENST00000478405 EVA1CP58658 441 aa23.96■■□□□ 1.43
SPIN3-203ENST00000478405 NFAT5O94916 1531 aa23.96■■□□□ 1.43
SPIN3-203ENST00000478405 STRN4Q9NRL3 753 aa23.95■■□□□ 1.43
SPIN3-203ENST00000478405 TRPC5Q9UL62 973 aaPredicted RBP23.95■■□□□ 1.43
SPIN3-203ENST00000478405 MARF1Q9Y4F3 1742 aaKnown RBP23.95■■□□□ 1.42
SPIN3-203ENST00000478405 MAP3K19Q56UN5 1328 aa23.95■■□□□ 1.42
SPIN3-203ENST00000478405 AMPHP49418 695 aa23.93■■□□□ 1.42
SPIN3-203ENST00000478405 USP54Q70EL1 1684 aa23.93■■□□□ 1.42
SPIN3-203ENST00000478405 IP6K1Q92551 441 aa23.92■■□□□ 1.42
SPIN3-203ENST00000478405 VPS72Q15906 364 aa23.92■■□□□ 1.42
SPIN3-203ENST00000478405 CCDC9Q9Y3X0 531 aaKnown RBP23.92■■□□□ 1.42
SPIN3-203ENST00000478405 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms