RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 A0A0G2JS52 829 aa20.79■□□□□ 0.92
SMARCE1-209ENST00000478349 MYT1Q01538 1121 aa20.79■□□□□ 0.92
SMARCE1-209ENST00000478349 SF3B2Q13435 895 aaKnown RBP20.79■□□□□ 0.92
SMARCE1-209ENST00000478349 SEPT12Q8IYM1 358 aa20.79■□□□□ 0.92
SMARCE1-209ENST00000478349 PRDM11Q9NQV5 511 aa20.79■□□□□ 0.92
SMARCE1-209ENST00000478349 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
SMARCE1-209ENST00000478349 POLR3AO14802 1390 aaPredicted RBP20.78■□□□□ 0.92
SMARCE1-209ENST00000478349 ADRA2BP18089 450 aa20.78■□□□□ 0.92
SMARCE1-209ENST00000478349 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
SMARCE1-209ENST00000478349 COL14A1Q05707 1796 aaKnown RBP20.77■□□□□ 0.92
SMARCE1-209ENST00000478349 ZRANB1Q9UGI0 708 aa20.77■□□□□ 0.92
SMARCE1-209ENST00000478349 ONECUT3O60422 494 aaPredicted RBP20.76■□□□□ 0.91
SMARCE1-209ENST00000478349 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
SMARCE1-209ENST00000478349 PLEKHG3A1L390 1219 aa20.75■□□□□ 0.91
SMARCE1-209ENST00000478349 NBPF1Q3BBV0 1214 aa20.75■□□□□ 0.91
SMARCE1-209ENST00000478349 KRT27Q7Z3Y8 459 aa20.75■□□□□ 0.91
SMARCE1-209ENST00000478349 ACEP12821 1306 aa20.75■□□□□ 0.91
SMARCE1-209ENST00000478349 BRD4O60885 1362 aaPredicted RBP20.73■□□□□ 0.91
SMARCE1-209ENST00000478349 NBPF8Q3BBV2 869 aa20.72■□□□□ 0.91
SMARCE1-209ENST00000478349 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
SMARCE1-209ENST00000478349 L3MBTL2Q969R5 705 aa20.71■□□□□ 0.91
SMARCE1-209ENST00000478349 PPIP5K1Q6PFW1 1433 aa20.7■□□□□ 0.9
SMARCE1-209ENST00000478349 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
SMARCE1-209ENST00000478349 KIAA0232Q92628 1395 aa20.7■□□□□ 0.9
SMARCE1-209ENST00000478349 NRAPQ86VF7 1730 aa20.7■□□□□ 0.9
SMARCE1-209ENST00000478349 ABTB2Q8N961 1025 aa20.69■□□□□ 0.9
SMARCE1-209ENST00000478349 SPATA31A5Q5VU36 1347 aa20.69■□□□□ 0.9
SMARCE1-209ENST00000478349 SPATA31A7Q8IWB4 1347 aa20.69■□□□□ 0.9
SMARCE1-209ENST00000478349 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
SMARCE1-209ENST00000478349 EVC2Q86UK5 1308 aa20.68■□□□□ 0.9
SMARCE1-209ENST00000478349 NLRP13Q86W25 1043 aa20.67■□□□□ 0.9
SMARCE1-209ENST00000478349 CRYBG1Q9Y4K1 1723 aa20.67■□□□□ 0.9
SMARCE1-209ENST00000478349 BAG6P46379 1132 aa20.65■□□□□ 0.9
SMARCE1-209ENST00000478349 ZC3H6P61129 1189 aaKnown RBP20.65■□□□□ 0.9
SMARCE1-209ENST00000478349 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
SMARCE1-209ENST00000478349 NUTM2GQ5VZR2 741 aa20.65■□□□□ 0.9
SMARCE1-209ENST00000478349 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
SMARCE1-209ENST00000478349 QRICH2Q9H0J4 1663 aa20.64■□□□□ 0.9
SMARCE1-209ENST00000478349 PHRF1Q9P1Y6 1649 aaKnown RBP20.64■□□□□ 0.9
SMARCE1-209ENST00000478349 CPDO75976 1380 aa20.64■□□□□ 0.89
SMARCE1-209ENST00000478349 EP400Q96L91 3159 aa20.64■□□□□ 0.89
SMARCE1-209ENST00000478349 USP19O94966 1318 aa20.64■□□□□ 0.89
SMARCE1-209ENST00000478349 EVA1CP58658 441 aa20.64■□□□□ 0.89
SMARCE1-209ENST00000478349 STRN4Q9NRL3 753 aa20.64■□□□□ 0.89
SMARCE1-209ENST00000478349 CHRNA2Q15822 529 aa20.63■□□□□ 0.89
SMARCE1-209ENST00000478349 SPATA31A1Q5TZJ5 1347 aa20.62■□□□□ 0.89
SMARCE1-209ENST00000478349 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
SMARCE1-209ENST00000478349 NRKQ7Z2Y5 1582 aa20.61■□□□□ 0.89
SMARCE1-209ENST00000478349 USP6P35125 1406 aa20.61■□□□□ 0.89
SMARCE1-209ENST00000478349 TRPM1Q7Z4N2 1603 aa20.6■□□□□ 0.89
SMARCE1-209ENST00000478349 BRWD3Q6RI45 1802 aa20.6■□□□□ 0.89
SMARCE1-209ENST00000478349 CABP1Q9NZU7 370 aa20.6■□□□□ 0.89
SMARCE1-209ENST00000478349 SSH2Q76I76 1423 aa20.6■□□□□ 0.89
SMARCE1-209ENST00000478349 DEFB132Q7Z7B7 95 aa20.59■□□□□ 0.89
SMARCE1-209ENST00000478349 THSD7AQ9UPZ6 1657 aa20.58■□□□□ 0.89
SMARCE1-209ENST00000478349 GCP02774 474 aa20.58■□□□□ 0.89
SMARCE1-209ENST00000478349 ZNF692Q9BU19 519 aaPredicted RBP20.58■□□□□ 0.89
SMARCE1-209ENST00000478349 NLRP6P59044 892 aa20.57■□□□□ 0.88
SMARCE1-209ENST00000478349 BARGINQ6ZT62 677 aa20.57■□□□□ 0.88
SMARCE1-209ENST00000478349 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
SMARCE1-209ENST00000478349 THRAP3Q9Y2W1 955 aaKnown RBP20.56■□□□□ 0.88
SMARCE1-209ENST00000478349 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
SMARCE1-209ENST00000478349 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
SMARCE1-209ENST00000478349 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
SMARCE1-209ENST00000478349 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
SMARCE1-209ENST00000478349 PDE3BQ13370 1112 aa20.54■□□□□ 0.88
SMARCE1-209ENST00000478349 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
SMARCE1-209ENST00000478349 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
SMARCE1-209ENST00000478349 AATKQ6ZMQ8 1374 aa20.52■□□□□ 0.88
SMARCE1-209ENST00000478349 KCNH5Q8NCM2 988 aa20.52■□□□□ 0.88
SMARCE1-209ENST00000478349 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
SMARCE1-209ENST00000478349 RGPD1P0DJD0 1748 aa20.52■□□□□ 0.88
SMARCE1-209ENST00000478349 DISP2A7MBM2 1401 aa20.52■□□□□ 0.87
SMARCE1-209ENST00000478349 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
SMARCE1-209ENST00000478349 ZBTB7CA1YPR0 619 aa20.51■□□□□ 0.87
SMARCE1-209ENST00000478349 LARP1Q6PKG0 1096 aaKnown RBP20.51■□□□□ 0.87
SMARCE1-209ENST00000478349 SLIT3O75094 1523 aa20.51■□□□□ 0.87
SMARCE1-209ENST00000478349 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
SMARCE1-209ENST00000478349 COL5A2P05997 1499 aaPredicted RBP20.5■□□□□ 0.87
SMARCE1-209ENST00000478349 CRB1P82279 1406 aa20.5■□□□□ 0.87
SMARCE1-209ENST00000478349 PARD3Q8TEW0 1356 aa20.49■□□□□ 0.87
SMARCE1-209ENST00000478349 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
SMARCE1-209ENST00000478349 TTC21BQ7Z4L5 1316 aa20.48■□□□□ 0.87
SMARCE1-209ENST00000478349 KTN1Q86UP2 1357 aaKnown RBP20.47■□□□□ 0.87
SMARCE1-209ENST00000478349 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
SMARCE1-209ENST00000478349 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
SMARCE1-209ENST00000478349 EN1Q05925 392 aaPredicted RBP20.45■□□□□ 0.86
SMARCE1-209ENST00000478349 TOM1L2Q6ZVM7 507 aa20.45■□□□□ 0.86
SMARCE1-209ENST00000478349 TRIM37O94972 964 aa20.44■□□□□ 0.86
SMARCE1-209ENST00000478349 HDGFL2Q7Z4V5 671 aaPredicted RBP20.44■□□□□ 0.86
SMARCE1-209ENST00000478349 CDCA7Q9BWT1 371 aaPredicted RBP20.44■□□□□ 0.86
SMARCE1-209ENST00000478349 PIK3C2AO00443 1686 aa20.44■□□□□ 0.86
SMARCE1-209ENST00000478349 APBA3O96018 575 aa20.42■□□□□ 0.86
SMARCE1-209ENST00000478349 WDR17Q8IZU2 1322 aa20.42■□□□□ 0.86
SMARCE1-209ENST00000478349 CSB-PGBD3P0DP91 1061 aa20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 TERF2IPQ9NYB0 399 aa20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 OVOS2A0A0G2JMS6 1433 aa20.41■□□□□ 0.86
SMARCE1-209ENST00000478349 OVOS2A0A0J9YW53 1432 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms