RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 MYT1Q01538 1121 aa23.72■■□□□ 1.39
PLXNB1-214ENST00000478171 NGDNQ8NEJ9 315 aaKnown RBP23.72■■□□□ 1.39
PLXNB1-214ENST00000478171 FAM98CQ17RN3 349 aaKnown RBP23.71■■□□□ 1.39
PLXNB1-214ENST00000478171 ITSN1Q15811 1721 aa23.7■■□□□ 1.39
PLXNB1-214ENST00000478171 ONECUT3O60422 494 aaPredicted RBP23.7■■□□□ 1.38
PLXNB1-214ENST00000478171 PAK3O75914 559 aaPredicted RBP23.7■■□□□ 1.38
PLXNB1-214ENST00000478171 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
PLXNB1-214ENST00000478171 TOPAZ1Q8N9V7 1692 aa23.68■■□□□ 1.38
PLXNB1-214ENST00000478171 PHRF1Q9P1Y6 1649 aaKnown RBP23.67■■□□□ 1.38
PLXNB1-214ENST00000478171 NUDT16Q96DE0 195 aaKnown RBP23.67■■□□□ 1.38
PLXNB1-214ENST00000478171 HRCP23327 699 aa23.65■■□□□ 1.38
PLXNB1-214ENST00000478171 NUTM2GQ5VZR2 741 aa23.65■■□□□ 1.38
PLXNB1-214ENST00000478171 THSD7AQ9UPZ6 1657 aa23.64■■□□□ 1.38
PLXNB1-214ENST00000478171 SF3B2Q13435 895 aaKnown RBP23.64■■□□□ 1.37
PLXNB1-214ENST00000478171 STAC3Q96MF2 364 aa23.64■■□□□ 1.37
PLXNB1-214ENST00000478171 PRDM11Q9NQV5 511 aa23.64■■□□□ 1.37
PLXNB1-214ENST00000478171 KIAA0232Q92628 1395 aa23.64■■□□□ 1.37
PLXNB1-214ENST00000478171 FAM182BQ5T319 152 aa23.63■■□□□ 1.37
PLXNB1-214ENST00000478171 CDK19Q9BWU1 502 aa23.63■■□□□ 1.37
PLXNB1-214ENST00000478171 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
PLXNB1-214ENST00000478171 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
PLXNB1-214ENST00000478171 CHRNA2Q15822 529 aa23.62■■□□□ 1.37
PLXNB1-214ENST00000478171 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
PLXNB1-214ENST00000478171 NBPF1Q3BBV0 1214 aa23.61■■□□□ 1.37
PLXNB1-214ENST00000478171 NRKQ7Z2Y5 1582 aa23.6■■□□□ 1.37
PLXNB1-214ENST00000478171 POLR3AO14802 1390 aaPredicted RBP23.59■■□□□ 1.37
PLXNB1-214ENST00000478171 ACEP12821 1306 aa23.59■■□□□ 1.37
PLXNB1-214ENST00000478171 ZC3H6P61129 1189 aaKnown RBP23.57■■□□□ 1.36
PLXNB1-214ENST00000478171 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
PLXNB1-214ENST00000478171 PSDA5PKW4 1024 aaPredicted RBP23.55■■□□□ 1.36
PLXNB1-214ENST00000478171 SPATA31A1Q5TZJ5 1347 aa23.55■■□□□ 1.36
PLXNB1-214ENST00000478171 RGPD1P0DJD0 1748 aa23.54■■□□□ 1.36
PLXNB1-214ENST00000478171 TNS1Q9HBL0 1735 aaKnown RBP23.54■■□□□ 1.36
PLXNB1-214ENST00000478171 BAG6P46379 1132 aa23.54■■□□□ 1.36
PLXNB1-214ENST00000478171 CCDC61Q9Y6R9 512 aa23.54■■□□□ 1.36
PLXNB1-214ENST00000478171 NBPF8Q3BBV2 869 aa23.53■■□□□ 1.36
PLXNB1-214ENST00000478171 QRICH2Q9H0J4 1663 aa23.52■■□□□ 1.36
PLXNB1-214ENST00000478171 EN1Q05925 392 aaPredicted RBP23.52■■□□□ 1.36
PLXNB1-214ENST00000478171 PPIP5K1Q6PFW1 1433 aa23.51■■□□□ 1.35
PLXNB1-214ENST00000478171 SSH2Q76I76 1423 aa23.51■■□□□ 1.35
PLXNB1-214ENST00000478171 PLEKHG3A1L390 1219 aa23.51■■□□□ 1.35
PLXNB1-214ENST00000478171 CABP2Q9NPB3 220 aa23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 USP35Q9P2H5 1018 aa23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 LRP5O75197 1615 aa23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 USP19O94966 1318 aa23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 CENPJQ9HC77 1338 aaPredicted RBP23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 LMO7Q8WWI1 1683 aa23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 CAMTA1Q9Y6Y1 1673 aa23.5■■□□□ 1.35
PLXNB1-214ENST00000478171 SRPK2P78362 688 aaKnown RBP23.49■■□□□ 1.35
PLXNB1-214ENST00000478171 ABTB2Q8N961 1025 aa23.48■■□□□ 1.35
PLXNB1-214ENST00000478171 DISP2A7MBM2 1401 aa23.46■■□□□ 1.35
PLXNB1-214ENST00000478171 LARP1Q6PKG0 1096 aaKnown RBP23.45■■□□□ 1.34
PLXNB1-214ENST00000478171 CPDO75976 1380 aa23.44■■□□□ 1.34
PLXNB1-214ENST00000478171 TRIM37O94972 964 aa23.44■■□□□ 1.34
PLXNB1-214ENST00000478171 EVA1CP58658 441 aa23.42■■□□□ 1.34
PLXNB1-214ENST00000478171 EZH2Q15910 746 aaKnown RBP23.42■■□□□ 1.34
PLXNB1-214ENST00000478171 USP6P35125 1406 aa23.42■■□□□ 1.34
PLXNB1-214ENST00000478171 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
PLXNB1-214ENST00000478171 R3HDM1Q15032 1099 aaKnown RBP23.41■■□□□ 1.34
PLXNB1-214ENST00000478171 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
PLXNB1-214ENST00000478171 COL5A2P05997 1499 aaPredicted RBP23.41■■□□□ 1.34
PLXNB1-214ENST00000478171 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
PLXNB1-214ENST00000478171 PIK3C2AO00443 1686 aa23.39■■□□□ 1.34
PLXNB1-214ENST00000478171 GCP02774 474 aa23.39■■□□□ 1.33
PLXNB1-214ENST00000478171 SIN3AQ96ST3 1273 aa23.39■■□□□ 1.33
PLXNB1-214ENST00000478171 CABP1Q9NZU7 370 aa23.39■■□□□ 1.33
PLXNB1-214ENST00000478171 SLIT3O75094 1523 aa23.38■■□□□ 1.33
PLXNB1-214ENST00000478171 FAM196AQ6ZSG2 479 aa23.38■■□□□ 1.33
PLXNB1-214ENST00000478171 BARGINQ6ZT62 677 aa23.38■■□□□ 1.33
PLXNB1-214ENST00000478171 NLRP13Q86W25 1043 aa23.38■■□□□ 1.33
PLXNB1-214ENST00000478171 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
PLXNB1-214ENST00000478171 CAMKK2Q96RR4 588 aa23.36■■□□□ 1.33
PLXNB1-214ENST00000478171 RREB1Q92766 1687 aa23.35■■□□□ 1.33
PLXNB1-214ENST00000478171 PARP4Q9UKK3 1724 aaKnown RBP23.34■■□□□ 1.33
PLXNB1-214ENST00000478171 APBA3O96018 575 aa23.34■■□□□ 1.33
PLXNB1-214ENST00000478171 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
PLXNB1-214ENST00000478171 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.32
PLXNB1-214ENST00000478171 LRRC37A3O60309 1634 aa23.33■■□□□ 1.32
PLXNB1-214ENST00000478171 BRD4O60885 1362 aaPredicted RBP23.32■■□□□ 1.32
PLXNB1-214ENST00000478171 ROCK2O75116 1388 aaKnown RBP23.32■■□□□ 1.32
PLXNB1-214ENST00000478171 NLRP6P59044 892 aa23.32■■□□□ 1.32
PLXNB1-214ENST00000478171 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
PLXNB1-214ENST00000478171 CRB1P82279 1406 aa23.31■■□□□ 1.32
PLXNB1-214ENST00000478171 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
PLXNB1-214ENST00000478171 COL18A1P39060 1754 aa23.29■■□□□ 1.32
PLXNB1-214ENST00000478171 AATKQ6ZMQ8 1374 aa23.29■■□□□ 1.32
PLXNB1-214ENST00000478171 PEAK1Q9H792 1746 aa23.28■■□□□ 1.32
PLXNB1-214ENST00000478171 CPSF1Q10570 1443 aaKnown RBP23.28■■□□□ 1.32
PLXNB1-214ENST00000478171 AKAP12Q02952 1782 aa23.28■■□□□ 1.32
PLXNB1-214ENST00000478171 THRAP3Q9Y2W1 955 aaKnown RBP23.28■■□□□ 1.32
PLXNB1-214ENST00000478171 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.32
PLXNB1-214ENST00000478171 WNK3Q9BYP7 1800 aa23.27■■□□□ 1.32
PLXNB1-214ENST00000478171 SOX12O15370 315 aa23.27■■□□□ 1.32
PLXNB1-214ENST00000478171 AXIN2Q9Y2T1 843 aa23.26■■□□□ 1.31
PLXNB1-214ENST00000478171 TTC21BQ7Z4L5 1316 aa23.26■■□□□ 1.31
PLXNB1-214ENST00000478171 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
PLXNB1-214ENST00000478171 OVOS2A0A0J9YW53 1432 aa23.25■■□□□ 1.31
PLXNB1-214ENST00000478171 OVOS2Q6IE36 1432 aa23.25■■□□□ 1.31
PLXNB1-214ENST00000478171 NFAT5O94916 1531 aa23.23■■□□□ 1.31
PLXNB1-214ENST00000478171 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms