RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 BAG6P46379 1132 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 EN1Q05925 392 aaPredicted RBP11.75□□□□□ -0.53
PTPRN-214ENST00000477819 ESCO1Q5FWF5 840 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 ROBO2Q9HCK4 1378 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 ADGRL2O95490 1459 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 PXDNQ92626 1479 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 SLIT2O94813 1529 aa11.75□□□□□ -0.53
PTPRN-214ENST00000477819 SPHKAPQ2M3C7 1700 aa11.74□□□□□ -0.53
PTPRN-214ENST00000477819 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
PTPRN-214ENST00000477819 NPHP3Q7Z494 1330 aa11.73□□□□□ -0.53
PTPRN-214ENST00000477819 CCDC9Q9Y3X0 531 aaKnown RBP11.73□□□□□ -0.53
PTPRN-214ENST00000477819 FAM182BQ5T319 152 aa11.72□□□□□ -0.53
PTPRN-214ENST00000477819 SLC39A7Q92504 469 aa11.72□□□□□ -0.53
PTPRN-214ENST00000477819 NUTM2FA1L443 756 aa11.71□□□□□ -0.53
PTPRN-214ENST00000477819 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
PTPRN-214ENST00000477819 FAM50AQ14320 339 aaKnown RBP11.71□□□□□ -0.53
PTPRN-214ENST00000477819 VPS72Q15906 364 aa11.71□□□□□ -0.53
PTPRN-214ENST00000477819 A0A0G2JS52 829 aa11.7□□□□□ -0.54
PTPRN-214ENST00000477819 TIE1P35590 1138 aa11.7□□□□□ -0.54
PTPRN-214ENST00000477819 MYT1Q01538 1121 aa11.7□□□□□ -0.54
PTPRN-214ENST00000477819 IQGAP3Q86VI3 1631 aa11.7□□□□□ -0.54
PTPRN-214ENST00000477819 C7P10643 843 aa11.69□□□□□ -0.54
PTPRN-214ENST00000477819 PYGBP11216 843 aa11.69□□□□□ -0.54
PTPRN-214ENST00000477819 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
PTPRN-214ENST00000477819 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
PTPRN-214ENST00000477819 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
PTPRN-214ENST00000477819 EZH2Q15910 746 aaKnown RBP11.68□□□□□ -0.54
PTPRN-214ENST00000477819 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
PTPRN-214ENST00000477819 NUP155O75694 1391 aa11.67□□□□□ -0.54
PTPRN-214ENST00000477819 NEXMIFQ5QGS0 1516 aa11.67□□□□□ -0.54
PTPRN-214ENST00000477819 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
PTPRN-214ENST00000477819 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
PTPRN-214ENST00000477819 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
PTPRN-214ENST00000477819 SPATA31A3Q5VYP0 1347 aa11.66□□□□□ -0.54
PTPRN-214ENST00000477819 LOC105371045A0A1W2PR82 267 aa11.66□□□□□ -0.54
PTPRN-214ENST00000477819 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
PTPRN-214ENST00000477819 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.54
PTPRN-214ENST00000477819 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
PTPRN-214ENST00000477819 RGPD1P0DJD0 1748 aa11.64□□□□□ -0.55
PTPRN-214ENST00000477819 FAM83GA6ND36 823 aa11.64□□□□□ -0.55
PTPRN-214ENST00000477819 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
PTPRN-214ENST00000477819 UTRNP46939 3433 aa11.64□□□□□ -0.55
PTPRN-214ENST00000477819 HFM1A2PYH4 1435 aa11.63□□□□□ -0.55
PTPRN-214ENST00000477819 KRT28Q7Z3Y7 464 aa11.63□□□□□ -0.55
PTPRN-214ENST00000477819 CAMKK2Q96RR4 588 aa11.63□□□□□ -0.55
PTPRN-214ENST00000477819 CDC42BPGQ6DT37 1551 aa11.62□□□□□ -0.55
PTPRN-214ENST00000477819 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
PTPRN-214ENST00000477819 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
PTPRN-214ENST00000477819 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
PTPRN-214ENST00000477819 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
PTPRN-214ENST00000477819 TNS1Q9HBL0 1735 aaKnown RBP11.62□□□□□ -0.55
PTPRN-214ENST00000477819 NWD2Q9ULI1 1742 aa11.62□□□□□ -0.55
PTPRN-214ENST00000477819 NAIPQ13075 1403 aa11.61□□□□□ -0.55
PTPRN-214ENST00000477819 CLTCL1P53675 1640 aa11.61□□□□□ -0.55
PTPRN-214ENST00000477819 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
PTPRN-214ENST00000477819 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
PTPRN-214ENST00000477819 DISP2A7MBM2 1401 aa11.6□□□□□ -0.55
PTPRN-214ENST00000477819 CAMTA1Q9Y6Y1 1673 aa11.6□□□□□ -0.55
PTPRN-214ENST00000477819 TRIM37O94972 964 aa11.6□□□□□ -0.55
PTPRN-214ENST00000477819 LMOD2Q6P5Q4 547 aa11.6□□□□□ -0.55
PTPRN-214ENST00000477819 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-214ENST00000477819 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
PTPRN-214ENST00000477819 PPP1R1BQ9UD71 204 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-214ENST00000477819 PRAG1Q86YV5 1406 aa11.6□□□□□ -0.55
PTPRN-214ENST00000477819 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
PTPRN-214ENST00000477819 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
PTPRN-214ENST00000477819 STK26Q9P289 416 aa11.59□□□□□ -0.55
PTPRN-214ENST00000477819 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
PTPRN-214ENST00000477819 APBA3O96018 575 aa11.58□□□□□ -0.56
PTPRN-214ENST00000477819 GSE1Q14687 1217 aa11.58□□□□□ -0.56
PTPRN-214ENST00000477819 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
PTPRN-214ENST00000477819 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
PTPRN-214ENST00000477819 TNS3Q68CZ2 1445 aa11.58□□□□□ -0.56
PTPRN-214ENST00000477819 NRAPQ86VF7 1730 aa11.57□□□□□ -0.56
PTPRN-214ENST00000477819 ABCA3Q99758 1704 aa11.57□□□□□ -0.56
PTPRN-214ENST00000477819 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
PTPRN-214ENST00000477819 KIF1BO60333 1816 aa11.56□□□□□ -0.56
PTPRN-214ENST00000477819 SPON1Q9HCB6 807 aa11.56□□□□□ -0.56
PTPRN-214ENST00000477819 COLQQ9Y215 455 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-214ENST00000477819 RGPD8O14715 1765 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-214ENST00000477819 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
PTPRN-214ENST00000477819 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
PTPRN-214ENST00000477819 KCNQ2O43526 872 aa11.55□□□□□ -0.56
PTPRN-214ENST00000477819 PSME1Q06323 249 aa11.55□□□□□ -0.56
PTPRN-214ENST00000477819 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
PTPRN-214ENST00000477819 KIF1AQ12756 1690 aa11.55□□□□□ -0.56
PTPRN-214ENST00000477819 FMN2Q9NZ56 1722 aa11.55□□□□□ -0.56
PTPRN-214ENST00000477819 ROCK1Q13464 1354 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 SEC24BO95487 1268 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 ITGAEP38570 1179 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 C1QTNF8P60827 252 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 SPOCK2Q92563 424 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 NUP188Q5SRE5 1749 aa11.54□□□□□ -0.56
PTPRN-214ENST00000477819 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
PTPRN-214ENST00000477819 NBPF8Q3BBV2 869 aa11.53□□□□□ -0.56
PTPRN-214ENST00000477819 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms