RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
PDE6D-204ENST00000477748 NWD2Q9ULI1 1742 aa20.15■□□□□ 0.82
PDE6D-204ENST00000477748 VPS72Q15906 364 aa20.14■□□□□ 0.81
PDE6D-204ENST00000477748 PLCH1Q4KWH8 1693 aa20.13■□□□□ 0.81
PDE6D-204ENST00000477748 GLI3P10071 1580 aa20.13■□□□□ 0.81
PDE6D-204ENST00000477748 PLEKHG5O94827 1062 aa20.12■□□□□ 0.81
PDE6D-204ENST00000477748 POLR3AO14802 1390 aaPredicted RBP20.11■□□□□ 0.81
PDE6D-204ENST00000477748 CCDC61Q9Y6R9 512 aa20.11■□□□□ 0.81
PDE6D-204ENST00000477748 TOPAZ1Q8N9V7 1692 aa20.1■□□□□ 0.81
PDE6D-204ENST00000477748 FAM83GA6ND36 823 aa20.1■□□□□ 0.81
PDE6D-204ENST00000477748 PAK3O75914 559 aaPredicted RBP20.1■□□□□ 0.81
PDE6D-204ENST00000477748 SRPK2P78362 688 aaKnown RBP20.1■□□□□ 0.81
PDE6D-204ENST00000477748 CARD11Q9BXL7 1154 aa20.1■□□□□ 0.81
PDE6D-204ENST00000477748 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
PDE6D-204ENST00000477748 PLEKHG3A1L390 1219 aa20.08■□□□□ 0.81
PDE6D-204ENST00000477748 CCDC125Q86Z20 511 aa20.08■□□□□ 0.81
PDE6D-204ENST00000477748 CABP2Q9NPB3 220 aa20.07■□□□□ 0.8
PDE6D-204ENST00000477748 COL14A1Q05707 1796 aaKnown RBP20.07■□□□□ 0.8
PDE6D-204ENST00000477748 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
PDE6D-204ENST00000477748 CCDC9Q9Y3X0 531 aaKnown RBP20.06■□□□□ 0.8
PDE6D-204ENST00000477748 CRYBG1Q9Y4K1 1723 aa20.06■□□□□ 0.8
PDE6D-204ENST00000477748 ACEP12821 1306 aa20.05■□□□□ 0.8
PDE6D-204ENST00000477748 EVC2Q86UK5 1308 aa20.05■□□□□ 0.8
PDE6D-204ENST00000477748 ONECUT3O60422 494 aaPredicted RBP20.05■□□□□ 0.8
PDE6D-204ENST00000477748 BTG4Q9NY30 223 aa20.05■□□□□ 0.8
PDE6D-204ENST00000477748 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
PDE6D-204ENST00000477748 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
PDE6D-204ENST00000477748 PRDM11Q9NQV5 511 aa20.04■□□□□ 0.8
PDE6D-204ENST00000477748 PPIP5K1Q6PFW1 1433 aa20.02■□□□□ 0.8
PDE6D-204ENST00000477748 BRD4O60885 1362 aaPredicted RBP20.02■□□□□ 0.8
PDE6D-204ENST00000477748 BLMP54132 1417 aaPredicted RBP20.02■□□□□ 0.79
PDE6D-204ENST00000477748 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
PDE6D-204ENST00000477748 KIAA0232Q92628 1395 aa20■□□□□ 0.79
PDE6D-204ENST00000477748 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
PDE6D-204ENST00000477748 PHRF1Q9P1Y6 1649 aaKnown RBP20■□□□□ 0.79
PDE6D-204ENST00000477748 KRT27Q7Z3Y8 459 aa19.99■□□□□ 0.79
PDE6D-204ENST00000477748 SBNO2Q9Y2G9 1366 aa19.98■□□□□ 0.79
PDE6D-204ENST00000477748 ABTB2Q8N961 1025 aa19.98■□□□□ 0.79
PDE6D-204ENST00000477748 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
PDE6D-204ENST00000477748 SPATA31A5Q5VU36 1347 aa19.98■□□□□ 0.79
PDE6D-204ENST00000477748 SPATA31A7Q8IWB4 1347 aa19.98■□□□□ 0.79
PDE6D-204ENST00000477748 A0A0G2JS52 829 aa19.97■□□□□ 0.79
PDE6D-204ENST00000477748 MYT1Q01538 1121 aa19.97■□□□□ 0.79
PDE6D-204ENST00000477748 USP19O94966 1318 aa19.97■□□□□ 0.79
PDE6D-204ENST00000477748 BRWD3Q6RI45 1802 aa19.97■□□□□ 0.79
PDE6D-204ENST00000477748 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
PDE6D-204ENST00000477748 NUTM2GQ5VZR2 741 aa19.96■□□□□ 0.79
PDE6D-204ENST00000477748 CPDO75976 1380 aa19.95■□□□□ 0.79
PDE6D-204ENST00000477748 NRKQ7Z2Y5 1582 aa19.95■□□□□ 0.78
PDE6D-204ENST00000477748 USP6P35125 1406 aa19.94■□□□□ 0.78
PDE6D-204ENST00000477748 ZC3H6P61129 1189 aaKnown RBP19.94■□□□□ 0.78
PDE6D-204ENST00000477748 SF3B2Q13435 895 aaKnown RBP19.94■□□□□ 0.78
PDE6D-204ENST00000477748 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
PDE6D-204ENST00000477748 CHRNA2Q15822 529 aa19.93■□□□□ 0.78
PDE6D-204ENST00000477748 SPATA31A1Q5TZJ5 1347 aa19.92■□□□□ 0.78
PDE6D-204ENST00000477748 THSD7AQ9UPZ6 1657 aa19.91■□□□□ 0.78
PDE6D-204ENST00000477748 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
PDE6D-204ENST00000477748 GCP02774 474 aa19.89■□□□□ 0.77
PDE6D-204ENST00000477748 SSH2Q76I76 1423 aa19.89■□□□□ 0.77
PDE6D-204ENST00000477748 STRN4Q9NRL3 753 aa19.89■□□□□ 0.77
PDE6D-204ENST00000477748 AKAP12Q02952 1782 aa19.88■□□□□ 0.77
PDE6D-204ENST00000477748 USP47Q96K76 1375 aa19.88■□□□□ 0.77
PDE6D-204ENST00000477748 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
PDE6D-204ENST00000477748 EVA1CP58658 441 aa19.87■□□□□ 0.77
PDE6D-204ENST00000477748 TESK2Q96S53 571 aa19.87■□□□□ 0.77
PDE6D-204ENST00000477748 LMO7Q8WWI1 1683 aa19.87■□□□□ 0.77
PDE6D-204ENST00000477748 SLIT3O75094 1523 aa19.86■□□□□ 0.77
PDE6D-204ENST00000477748 SLC24A1O60721 1099 aa19.86■□□□□ 0.77
PDE6D-204ENST00000477748 NLRP6P59044 892 aa19.86■□□□□ 0.77
PDE6D-204ENST00000477748 TMC1Q8TDI8 760 aa19.86■□□□□ 0.77
PDE6D-204ENST00000477748 CAMTA1Q9Y6Y1 1673 aa19.86■□□□□ 0.77
PDE6D-204ENST00000477748 BARGINQ6ZT62 677 aa19.85■□□□□ 0.77
PDE6D-204ENST00000477748 DEFB132Q7Z7B7 95 aa19.85■□□□□ 0.77
PDE6D-204ENST00000477748 LRP5O75197 1615 aa19.84■□□□□ 0.77
PDE6D-204ENST00000477748 BAG6P46379 1132 aa19.84■□□□□ 0.77
PDE6D-204ENST00000477748 PUS7Q96PZ0 661 aaKnown RBP19.84■□□□□ 0.77
PDE6D-204ENST00000477748 KTN1Q86UP2 1357 aaKnown RBP19.83■□□□□ 0.77
PDE6D-204ENST00000477748 COL5A2P05997 1499 aaPredicted RBP19.83■□□□□ 0.76
PDE6D-204ENST00000477748 PIK3C2AO00443 1686 aa19.83■□□□□ 0.76
PDE6D-204ENST00000477748 CPSF1Q10570 1443 aaKnown RBP19.83■□□□□ 0.76
PDE6D-204ENST00000477748 AATKQ6ZMQ8 1374 aa19.83■□□□□ 0.76
PDE6D-204ENST00000477748 TTC21BQ7Z4L5 1316 aa19.82■□□□□ 0.76
PDE6D-204ENST00000477748 TTC21AQ8NDW8 1320 aa19.82■□□□□ 0.76
PDE6D-204ENST00000477748 LARP1Q6PKG0 1096 aaKnown RBP19.82■□□□□ 0.76
PDE6D-204ENST00000477748 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
PDE6D-204ENST00000477748 SLC12A5Q9H2X9 1139 aa19.82■□□□□ 0.76
PDE6D-204ENST00000477748 THRAP3Q9Y2W1 955 aaKnown RBP19.82■□□□□ 0.76
PDE6D-204ENST00000477748 MON2Q7Z3U7 1717 aa19.82■□□□□ 0.76
PDE6D-204ENST00000477748 HDGFL2Q7Z4V5 671 aaPredicted RBP19.81■□□□□ 0.76
PDE6D-204ENST00000477748 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
PDE6D-204ENST00000477748 RGPD1P0DJD0 1748 aa19.8■□□□□ 0.76
PDE6D-204ENST00000477748 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
PDE6D-204ENST00000477748 TMF1P82094 1093 aa19.8■□□□□ 0.76
PDE6D-204ENST00000477748 FAM196AQ6ZSG2 479 aa19.79■□□□□ 0.76
PDE6D-204ENST00000477748 KCNH5Q8NCM2 988 aa19.79■□□□□ 0.76
PDE6D-204ENST00000477748 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
PDE6D-204ENST00000477748 CRB1P82279 1406 aa19.78■□□□□ 0.76
PDE6D-204ENST00000477748 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
PDE6D-204ENST00000477748 TERF2IPQ9NYB0 399 aa19.78■□□□□ 0.76
PDE6D-204ENST00000477748 PDE3BQ13370 1112 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms