RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
CD40-205ENST00000477696 PRR36Q9H6K5 1346 aa12.24□□□□□ -0.45
CD40-205ENST00000477696 CLSPNQ9HAW4 1339 aa12.24□□□□□ -0.45
CD40-205ENST00000477696 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
CD40-205ENST00000477696 COL14A1Q05707 1796 aaKnown RBP12.23□□□□□ -0.45
CD40-205ENST00000477696 QRICH2Q9H0J4 1663 aa12.22□□□□□ -0.45
CD40-205ENST00000477696 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
CD40-205ENST00000477696 RALGAPBQ86X10 1494 aa12.22□□□□□ -0.45
CD40-205ENST00000477696 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
CD40-205ENST00000477696 HAP1P54257 671 aaPredicted RBP12.22□□□□□ -0.45
CD40-205ENST00000477696 SRPK2P78362 688 aaKnown RBP12.22□□□□□ -0.45
CD40-205ENST00000477696 NBPF8Q3BBV2 869 aa12.22□□□□□ -0.45
CD40-205ENST00000477696 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
CD40-205ENST00000477696 EP400Q96L91 3159 aa12.22□□□□□ -0.45
CD40-205ENST00000477696 ATP7BP35670 1465 aa12.21□□□□□ -0.45
CD40-205ENST00000477696 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
CD40-205ENST00000477696 CARD11Q9BXL7 1154 aa12.21□□□□□ -0.45
CD40-205ENST00000477696 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.45
CD40-205ENST00000477696 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
CD40-205ENST00000477696 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
CD40-205ENST00000477696 ACEP12821 1306 aa12.18□□□□□ -0.46
CD40-205ENST00000477696 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
CD40-205ENST00000477696 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
CD40-205ENST00000477696 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
CD40-205ENST00000477696 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
CD40-205ENST00000477696 UNC5CLQ8IV45 518 aa12.17□□□□□ -0.46
CD40-205ENST00000477696 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
CD40-205ENST00000477696 BRD4O60885 1362 aaPredicted RBP12.17□□□□□ -0.46
CD40-205ENST00000477696 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
CD40-205ENST00000477696 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
CD40-205ENST00000477696 CABLES1Q8TDN4 633 aa12.15□□□□□ -0.46
CD40-205ENST00000477696 CABP1Q9NZU7 370 aa12.15□□□□□ -0.46
CD40-205ENST00000477696 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
CD40-205ENST00000477696 NRKQ7Z2Y5 1582 aa12.14□□□□□ -0.47
CD40-205ENST00000477696 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
CD40-205ENST00000477696 CCER1Q8TC90 406 aaPredicted RBP12.14□□□□□ -0.47
CD40-205ENST00000477696 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
CD40-205ENST00000477696 BLMP54132 1417 aaPredicted RBP12.13□□□□□ -0.47
CD40-205ENST00000477696 VPS72Q15906 364 aa12.13□□□□□ -0.47
CD40-205ENST00000477696 ABTB2Q8N961 1025 aa12.13□□□□□ -0.47
CD40-205ENST00000477696 CCDC125Q86Z20 511 aa12.12□□□□□ -0.47
CD40-205ENST00000477696 PUS7Q96PZ0 661 aaKnown RBP12.12□□□□□ -0.47
CD40-205ENST00000477696 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
CD40-205ENST00000477696 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
CD40-205ENST00000477696 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
CD40-205ENST00000477696 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
CD40-205ENST00000477696 LRP5O75197 1615 aa12.1□□□□□ -0.47
CD40-205ENST00000477696 ST20-MTHFSA0A0A6YYL1 179 aa12.09□□□□□ -0.47
CD40-205ENST00000477696 NUTM2GQ5VZR2 741 aa12.09□□□□□ -0.47
CD40-205ENST00000477696 PRDM11Q9NQV5 511 aa12.09□□□□□ -0.47
CD40-205ENST00000477696 USP6P35125 1406 aa12.09□□□□□ -0.47
CD40-205ENST00000477696 WNK3Q9BYP7 1800 aa12.08□□□□□ -0.48
CD40-205ENST00000477696 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
CD40-205ENST00000477696 TMC1Q8TDI8 760 aa12.07□□□□□ -0.48
CD40-205ENST00000477696 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
CD40-205ENST00000477696 TERF2IPQ9NYB0 399 aa12.07□□□□□ -0.48
CD40-205ENST00000477696 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
CD40-205ENST00000477696 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
CD40-205ENST00000477696 KTN1Q86UP2 1357 aaKnown RBP12.06□□□□□ -0.48
CD40-205ENST00000477696 USP47Q96K76 1375 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 NINLQ9Y2I6 1382 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 NLRP6P59044 892 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 TMF1P82094 1093 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 CDCA8Q53HL2 280 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 HDGFL2Q7Z4V5 671 aaPredicted RBP12.06□□□□□ -0.48
CD40-205ENST00000477696 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 TESK2Q96S53 571 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 USP19O94966 1318 aa12.06□□□□□ -0.48
CD40-205ENST00000477696 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
CD40-205ENST00000477696 KIAA0232Q92628 1395 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 CPSF1Q10570 1443 aaKnown RBP12.05□□□□□ -0.48
CD40-205ENST00000477696 SSH2Q76I76 1423 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 GCP02774 474 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 ZC3H6P61129 1189 aaKnown RBP12.05□□□□□ -0.48
CD40-205ENST00000477696 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 RREB1Q92766 1687 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 CPDO75976 1380 aa12.05□□□□□ -0.48
CD40-205ENST00000477696 EVA1CP58658 441 aa12.04□□□□□ -0.48
CD40-205ENST00000477696 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 SLIT3O75094 1523 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 KRT27Q7Z3Y8 459 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 KCNH5Q8NCM2 988 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 SLC12A5Q9H2X9 1139 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
CD40-205ENST00000477696 COL18A1P39060 1754 aa12.02□□□□□ -0.48
CD40-205ENST00000477696 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
CD40-205ENST00000477696 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.49
CD40-205ENST00000477696 NUP188Q5SRE5 1749 aa12.01□□□□□ -0.49
CD40-205ENST00000477696 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
CD40-205ENST00000477696 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
CD40-205ENST00000477696 EDC4Q6P2E9 1401 aaKnown RBP12.01□□□□□ -0.49
CD40-205ENST00000477696 LRRC37A3O60309 1634 aa12□□□□□ -0.49
CD40-205ENST00000477696 PEAK1Q9H792 1746 aa12□□□□□ -0.49
CD40-205ENST00000477696 SBF2Q86WG5 1849 aa12□□□□□ -0.49
CD40-205ENST00000477696 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms