RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TXNDC2Q86VQ3 553 aa10.58□□□□□ -0.72
VMA21-203ENST00000477649 MORC1Q86VD1 984 aa10.57□□□□□ -0.72
VMA21-203ENST00000477649 CFAP53Q96M91 514 aa10.57□□□□□ -0.72
VMA21-203ENST00000477649 CDK19Q9BWU1 502 aa10.57□□□□□ -0.72
VMA21-203ENST00000477649 NUDCQ9Y266 331 aa10.57□□□□□ -0.72
VMA21-203ENST00000477649 SUPT16HQ9Y5B9 1047 aaKnown RBP10.57□□□□□ -0.72
VMA21-203ENST00000477649 ADAMTS13Q76LX8 1427 aa10.57□□□□□ -0.72
VMA21-203ENST00000477649 MINK1Q8N4C8 1332 aaPredicted RBP10.57□□□□□ -0.72
VMA21-203ENST00000477649 METP08581 1390 aa10.56□□□□□ -0.72
VMA21-203ENST00000477649 BCANQ96GW7 911 aa10.56□□□□□ -0.72
VMA21-203ENST00000477649 CABP2Q9NPB3 220 aa10.56□□□□□ -0.72
VMA21-203ENST00000477649 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
VMA21-203ENST00000477649 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
VMA21-203ENST00000477649 A0A1W2PP64 1363 aa10.54□□□□□ -0.72
VMA21-203ENST00000477649 ADGRB2O60241 1585 aa10.54□□□□□ -0.72
VMA21-203ENST00000477649 CEBPAP49715 358 aaPredicted RBP10.54□□□□□ -0.72
VMA21-203ENST00000477649 PTCH1Q13635 1447 aa10.54□□□□□ -0.72
VMA21-203ENST00000477649 LTKP29376 864 aa10.53□□□□□ -0.72
VMA21-203ENST00000477649 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
VMA21-203ENST00000477649 CCDC61Q9Y6R9 512 aa10.53□□□□□ -0.72
VMA21-203ENST00000477649 ADAMTSL3P82987 1691 aa10.53□□□□□ -0.72
VMA21-203ENST00000477649 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.72
VMA21-203ENST00000477649 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
VMA21-203ENST00000477649 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
VMA21-203ENST00000477649 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
VMA21-203ENST00000477649 FKBP8Q14318 412 aa10.51□□□□□ -0.73
VMA21-203ENST00000477649 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
VMA21-203ENST00000477649 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
VMA21-203ENST00000477649 CPSF1Q10570 1443 aaKnown RBP10.5□□□□□ -0.73
VMA21-203ENST00000477649 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
VMA21-203ENST00000477649 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
VMA21-203ENST00000477649 ANKLE2Q86XL3 938 aa10.5□□□□□ -0.73
VMA21-203ENST00000477649 PNNQ9H307 717 aaKnown RBP10.5□□□□□ -0.73
VMA21-203ENST00000477649 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
VMA21-203ENST00000477649 RNF123Q5XPI4 1314 aa10.5□□□□□ -0.73
VMA21-203ENST00000477649 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
VMA21-203ENST00000477649 CDC42BPGQ6DT37 1551 aa10.49□□□□□ -0.73
VMA21-203ENST00000477649 NUDT16Q96DE0 195 aaKnown RBP10.49□□□□□ -0.73
VMA21-203ENST00000477649 ROBO2Q9HCK4 1378 aa10.49□□□□□ -0.73
VMA21-203ENST00000477649 PPIP5K1Q6PFW1 1433 aa10.49□□□□□ -0.73
VMA21-203ENST00000477649 SETD1BQ9UPS6 1966 aaKnown RBP10.48□□□□□ -0.73
VMA21-203ENST00000477649 RIMS1Q86UR5 1692 aaKnown RBP10.48□□□□□ -0.73
VMA21-203ENST00000477649 PLEKHG3A1L390 1219 aa10.48□□□□□ -0.73
VMA21-203ENST00000477649 FYB1O15117 783 aa10.48□□□□□ -0.73
VMA21-203ENST00000477649 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
VMA21-203ENST00000477649 ANKRD26Q9UPS8 1709 aa10.47□□□□□ -0.73
VMA21-203ENST00000477649 MTHFSP49914 203 aa10.47□□□□□ -0.73
VMA21-203ENST00000477649 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
VMA21-203ENST00000477649 ANKARQ7Z5J8 1434 aa10.47□□□□□ -0.73
VMA21-203ENST00000477649 GOLGA2Q08379 1002 aa10.46□□□□□ -0.73
VMA21-203ENST00000477649 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
VMA21-203ENST00000477649 AATKQ6ZMQ8 1374 aa10.46□□□□□ -0.74
VMA21-203ENST00000477649 PTPRUQ92729 1446 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 CCDC27Q2M243 656 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 SLC26A8Q96RN1 970 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 PPP4R2Q9NY27 417 aa10.45□□□□□ -0.74
VMA21-203ENST00000477649 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
VMA21-203ENST00000477649 RCAN3Q9UKA8 241 aa10.44□□□□□ -0.74
VMA21-203ENST00000477649 TTC21AQ8NDW8 1320 aa10.43□□□□□ -0.74
VMA21-203ENST00000477649 E9PSI1 815 aa10.43□□□□□ -0.74
VMA21-203ENST00000477649 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
VMA21-203ENST00000477649 KIF20BQ96Q89 1820 aa10.42□□□□□ -0.74
VMA21-203ENST00000477649 WDR63Q8IWG1 891 aa10.42□□□□□ -0.74
VMA21-203ENST00000477649 COG3Q96JB2 828 aa10.42□□□□□ -0.74
VMA21-203ENST00000477649 MON2Q7Z3U7 1717 aa10.41□□□□□ -0.74
VMA21-203ENST00000477649 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
VMA21-203ENST00000477649 APAF1O14727 1248 aa10.41□□□□□ -0.74
VMA21-203ENST00000477649 DIAPH1O60610 1272 aaKnown RBP10.41□□□□□ -0.74
VMA21-203ENST00000477649 TNNT2P45379 298 aaPredicted RBP10.41□□□□□ -0.74
VMA21-203ENST00000477649 TRMT2AQ8IZ69 625 aaKnown RBP10.41□□□□□ -0.74
VMA21-203ENST00000477649 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
VMA21-203ENST00000477649 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.41□□□□□ -0.74
VMA21-203ENST00000477649 NPHP4O75161 1426 aaPredicted RBP10.41□□□□□ -0.74
VMA21-203ENST00000477649 PRR36Q9H6K5 1346 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 AKAP12Q02952 1782 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 FCHSD2O94868 740 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 NEFMP07197 916 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 SLFN5Q08AF3 891 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 ITSN1Q15811 1721 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 COL3A1P02461 1466 aaPredicted RBP10.4□□□□□ -0.74
VMA21-203ENST00000477649 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
VMA21-203ENST00000477649 SHPRHQ149N8 1683 aa10.4□□□□□ -0.74
VMA21-203ENST00000477649 USP6P35125 1406 aa10.4□□□□□ -0.75
VMA21-203ENST00000477649 IQSEC2Q5JU85 1478 aa10.39□□□□□ -0.75
VMA21-203ENST00000477649 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
VMA21-203ENST00000477649 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
VMA21-203ENST00000477649 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
VMA21-203ENST00000477649 ACEP12821 1306 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 TTC21BQ7Z4L5 1316 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 MAPK8IP3Q9UPT6 1336 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 CT47B1P0C2W7 299 aaPredicted RBP10.38□□□□□ -0.75
VMA21-203ENST00000477649 KCNA6P17658 529 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.38□□□□□ -0.75
VMA21-203ENST00000477649 POLKQ9UBT6 870 aa10.38□□□□□ -0.75
VMA21-203ENST00000477649 SALL2Q9Y467 1007 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms