RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
SRSF3-203ENST00000477442 KIAA1210Q9ULL0 1709 aa19.03■□□□□ 0.64
SRSF3-203ENST00000477442 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
SRSF3-203ENST00000477442 SRCAPQ6ZRS2 3230 aa19.02■□□□□ 0.63
SRSF3-203ENST00000477442 COL14A1Q05707 1796 aaKnown RBP19.01■□□□□ 0.63
SRSF3-203ENST00000477442 A0A0G2JS52 829 aa19.01■□□□□ 0.63
SRSF3-203ENST00000477442 ONECUT3O60422 494 aaPredicted RBP19.01■□□□□ 0.63
SRSF3-203ENST00000477442 MYT1Q01538 1121 aa19.01■□□□□ 0.63
SRSF3-203ENST00000477442 FAM98CQ17RN3 349 aaKnown RBP19.01■□□□□ 0.63
SRSF3-203ENST00000477442 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
SRSF3-203ENST00000477442 CCDC125Q86Z20 511 aa19.01■□□□□ 0.63
SRSF3-203ENST00000477442 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
SRSF3-203ENST00000477442 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
SRSF3-203ENST00000477442 ACEP12821 1306 aa19■□□□□ 0.63
SRSF3-203ENST00000477442 CHRNA2Q15822 529 aa18.99■□□□□ 0.63
SRSF3-203ENST00000477442 KRT27Q7Z3Y8 459 aa18.99■□□□□ 0.63
SRSF3-203ENST00000477442 PRDM11Q9NQV5 511 aa18.98■□□□□ 0.63
SRSF3-203ENST00000477442 POLR3AO14802 1390 aaPredicted RBP18.97■□□□□ 0.63
SRSF3-203ENST00000477442 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
SRSF3-203ENST00000477442 PHRF1Q9P1Y6 1649 aaKnown RBP18.97■□□□□ 0.63
SRSF3-203ENST00000477442 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
SRSF3-203ENST00000477442 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
SRSF3-203ENST00000477442 ZRANB1Q9UGI0 708 aa18.97■□□□□ 0.63
SRSF3-203ENST00000477442 CCDC61Q9Y6R9 512 aa18.97■□□□□ 0.63
SRSF3-203ENST00000477442 ZC3H6P61129 1189 aaKnown RBP18.96■□□□□ 0.63
SRSF3-203ENST00000477442 FAM182BQ5T319 152 aa18.96■□□□□ 0.63
SRSF3-203ENST00000477442 L3MBTL2Q969R5 705 aa18.96■□□□□ 0.63
SRSF3-203ENST00000477442 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
SRSF3-203ENST00000477442 SPATA31A5Q5VU36 1347 aa18.95■□□□□ 0.62
SRSF3-203ENST00000477442 SPATA31A7Q8IWB4 1347 aa18.95■□□□□ 0.62
SRSF3-203ENST00000477442 CENPJQ9HC77 1338 aaPredicted RBP18.95■□□□□ 0.62
SRSF3-203ENST00000477442 SRPK2P78362 688 aaKnown RBP18.94■□□□□ 0.62
SRSF3-203ENST00000477442 CABP2Q9NPB3 220 aa18.94■□□□□ 0.62
SRSF3-203ENST00000477442 STRN4Q9NRL3 753 aa18.93■□□□□ 0.62
SRSF3-203ENST00000477442 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
SRSF3-203ENST00000477442 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
SRSF3-203ENST00000477442 SF3B2Q13435 895 aaKnown RBP18.91■□□□□ 0.62
SRSF3-203ENST00000477442 NRKQ7Z2Y5 1582 aa18.9■□□□□ 0.62
SRSF3-203ENST00000477442 THSD7AQ9UPZ6 1657 aa18.9■□□□□ 0.62
SRSF3-203ENST00000477442 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
SRSF3-203ENST00000477442 ABTB2Q8N961 1025 aa18.9■□□□□ 0.62
SRSF3-203ENST00000477442 SPATA31A1Q5TZJ5 1347 aa18.89■□□□□ 0.61
SRSF3-203ENST00000477442 TRPM1Q7Z4N2 1603 aa18.88■□□□□ 0.61
SRSF3-203ENST00000477442 USP19O94966 1318 aa18.87■□□□□ 0.61
SRSF3-203ENST00000477442 CABP1Q9NZU7 370 aa18.87■□□□□ 0.61
SRSF3-203ENST00000477442 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
SRSF3-203ENST00000477442 CAMTA1Q9Y6Y1 1673 aa18.87■□□□□ 0.61
SRSF3-203ENST00000477442 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
SRSF3-203ENST00000477442 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
SRSF3-203ENST00000477442 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
SRSF3-203ENST00000477442 USP6P35125 1406 aa18.83■□□□□ 0.61
SRSF3-203ENST00000477442 GCP02774 474 aa18.83■□□□□ 0.6
SRSF3-203ENST00000477442 BAG6P46379 1132 aa18.83■□□□□ 0.6
SRSF3-203ENST00000477442 EVA1CP58658 441 aa18.83■□□□□ 0.6
SRSF3-203ENST00000477442 EN1Q05925 392 aaPredicted RBP18.83■□□□□ 0.6
SRSF3-203ENST00000477442 NLRP13Q86W25 1043 aa18.83■□□□□ 0.6
SRSF3-203ENST00000477442 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
SRSF3-203ENST00000477442 CPDO75976 1380 aa18.82■□□□□ 0.6
SRSF3-203ENST00000477442 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
SRSF3-203ENST00000477442 PSDA5PKW4 1024 aaPredicted RBP18.82■□□□□ 0.6
SRSF3-203ENST00000477442 RGPD1P0DJD0 1748 aa18.81■□□□□ 0.6
SRSF3-203ENST00000477442 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
SRSF3-203ENST00000477442 EVC2Q86UK5 1308 aa18.79■□□□□ 0.6
SRSF3-203ENST00000477442 TRIM37O94972 964 aa18.79■□□□□ 0.6
SRSF3-203ENST00000477442 NLRP6P59044 892 aa18.79■□□□□ 0.6
SRSF3-203ENST00000477442 PIK3C2AO00443 1686 aa18.78■□□□□ 0.6
SRSF3-203ENST00000477442 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.6
SRSF3-203ENST00000477442 BARGINQ6ZT62 677 aa18.77■□□□□ 0.6
SRSF3-203ENST00000477442 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.6
SRSF3-203ENST00000477442 SLIT3O75094 1523 aa18.77■□□□□ 0.6
SRSF3-203ENST00000477442 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
SRSF3-203ENST00000477442 EZH2Q15910 746 aaKnown RBP18.76■□□□□ 0.59
SRSF3-203ENST00000477442 FAM196AQ6ZSG2 479 aa18.75■□□□□ 0.59
SRSF3-203ENST00000477442 DISP2A7MBM2 1401 aa18.74■□□□□ 0.59
SRSF3-203ENST00000477442 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
SRSF3-203ENST00000477442 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
SRSF3-203ENST00000477442 SOX12O15370 315 aa18.73■□□□□ 0.59
SRSF3-203ENST00000477442 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 APBA3O96018 575 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 R3HDM1Q15032 1099 aaKnown RBP18.72■□□□□ 0.59
SRSF3-203ENST00000477442 CAMKK2Q96RR4 588 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 COL18A1P39060 1754 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 AKAP12Q02952 1782 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 CRB1P82279 1406 aa18.72■□□□□ 0.59
SRSF3-203ENST00000477442 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
SRSF3-203ENST00000477442 THRAP3Q9Y2W1 955 aaKnown RBP18.7■□□□□ 0.58
SRSF3-203ENST00000477442 PARP4Q9UKK3 1724 aaKnown RBP18.69■□□□□ 0.58
SRSF3-203ENST00000477442 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
SRSF3-203ENST00000477442 LRP5O75197 1615 aa18.69■□□□□ 0.58
SRSF3-203ENST00000477442 KTN1Q86UP2 1357 aaKnown RBP18.68■□□□□ 0.58
SRSF3-203ENST00000477442 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
SRSF3-203ENST00000477442 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
SRSF3-203ENST00000477442 TOM1L2Q6ZVM7 507 aa18.67■□□□□ 0.58
SRSF3-203ENST00000477442 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
SRSF3-203ENST00000477442 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
SRSF3-203ENST00000477442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
SRSF3-203ENST00000477442 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
SRSF3-203ENST00000477442 SBNO2Q9Y2G9 1366 aa18.66■□□□□ 0.58
SRSF3-203ENST00000477442 NFAT5O94916 1531 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms