RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
RPL39-203ENST00000477403 IL27Q8NEV9 243 aa7.73□□□□□ -1.17
RPL39-203ENST00000477403 MRGPRX2Q96LB1 330 aa7.73□□□□□ -1.17
RPL39-203ENST00000477403 MAP10Q9P2G4 905 aa7.73□□□□□ -1.17
RPL39-203ENST00000477403 RB1CC1Q8TDY2 1594 aa7.72□□□□□ -1.17
RPL39-203ENST00000477403 DGAT1O75907 488 aa7.72□□□□□ -1.17
RPL39-203ENST00000477403 TOR4AQ9NXH8 423 aa7.72□□□□□ -1.17
RPL39-203ENST00000477403 EHBP1Q8NDI1 1231 aa7.71□□□□□ -1.18
RPL39-203ENST00000477403 BAP1Q92560 729 aa7.71□□□□□ -1.18
RPL39-203ENST00000477403 F12P00748 615 aaPredicted RBP7.7□□□□□ -1.18
RPL39-203ENST00000477403 SH3BP2P78314 561 aa7.7□□□□□ -1.18
RPL39-203ENST00000477403 SNIP1Q8TAD8 396 aaKnown RBP7.7□□□□□ -1.18
RPL39-203ENST00000477403 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.7□□□□□ -1.18
RPL39-203ENST00000477403 PRKCSHP14314 528 aaPredicted RBP7.69□□□□□ -1.18
RPL39-203ENST00000477403 MYT1Q01538 1121 aa7.69□□□□□ -1.18
RPL39-203ENST00000477403 FBXO31Q5XUX0 539 aaPredicted RBP7.69□□□□□ -1.18
RPL39-203ENST00000477403 CTDSPL2Q05D32 466 aa7.68□□□□□ -1.18
RPL39-203ENST00000477403 ZNF511Q8NB15 262 aa7.68□□□□□ -1.18
RPL39-203ENST00000477403 PCMTD1Q96MG8 357 aaPredicted RBP7.68□□□□□ -1.18
RPL39-203ENST00000477403 J3QL48 77 aa7.67□□□□□ -1.18
RPL39-203ENST00000477403 AP1G2O75843 785 aa7.66□□□□□ -1.18
RPL39-203ENST00000477403 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
RPL39-203ENST00000477403 SMPD1P17405 629 aa7.66□□□□□ -1.18
RPL39-203ENST00000477403 PPP2R2DQ66LE6 453 aa7.66□□□□□ -1.18
RPL39-203ENST00000477403 ST8SIA5O15466 376 aa7.65□□□□□ -1.18
RPL39-203ENST00000477403 AGERQ15109 404 aa7.65□□□□□ -1.18
RPL39-203ENST00000477403 LRRN4Q8WUT4 740 aa7.65□□□□□ -1.18
RPL39-203ENST00000477403 GOPCQ9HD26 462 aa7.65□□□□□ -1.18
RPL39-203ENST00000477403 NACADO15069 1562 aa7.64□□□□□ -1.19
RPL39-203ENST00000477403 SIAH2O43255 324 aa7.64□□□□□ -1.19
RPL39-203ENST00000477403 FOXJ1Q92949 421 aa7.64□□□□□ -1.19
RPL39-203ENST00000477403 AVPP01185 164 aa7.63□□□□□ -1.19
RPL39-203ENST00000477403 VARSP26640 1264 aaKnown RBP7.63□□□□□ -1.19
RPL39-203ENST00000477403 RFC5P40937 340 aa7.63□□□□□ -1.19
RPL39-203ENST00000477403 ARMC2Q8NEN0 867 aa7.63□□□□□ -1.19
RPL39-203ENST00000477403 AAASQ9NRG9 546 aa7.63□□□□□ -1.19
RPL39-203ENST00000477403 TLL2Q9Y6L7 1015 aa7.63□□□□□ -1.19
RPL39-203ENST00000477403 AXIN1O15169 862 aa7.62□□□□□ -1.19
RPL39-203ENST00000477403 HPS1Q92902 700 aa7.62□□□□□ -1.19
RPL39-203ENST00000477403 WASF2Q9Y6W5 498 aa7.62□□□□□ -1.19
RPL39-203ENST00000477403 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
RPL39-203ENST00000477403 NR6A1Q15406 480 aa7.61□□□□□ -1.19
RPL39-203ENST00000477403 CTC1Q2NKJ3 1217 aa7.61□□□□□ -1.19
RPL39-203ENST00000477403 NBPF14Q5TI25 921 aa7.61□□□□□ -1.19
RPL39-203ENST00000477403 ZNF787Q6DD87 383 aa7.6□□□□□ -1.19
RPL39-203ENST00000477403 BPHLQ86WA6 291 aaPredicted RBP7.6□□□□□ -1.19
RPL39-203ENST00000477403 FAM174AQ8TBP5 190 aa7.6□□□□□ -1.19
RPL39-203ENST00000477403 MAGEB6P1A0A0J9YX57 407 aa7.59□□□□□ -1.19
RPL39-203ENST00000477403 ARID5BQ14865 1188 aa7.59□□□□□ -1.19
RPL39-203ENST00000477403 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
RPL39-203ENST00000477403 CRIPAKQ8N1N5 446 aa7.59□□□□□ -1.19
RPL39-203ENST00000477403 DACH1Q9UI36 760 aa7.59□□□□□ -1.19
RPL39-203ENST00000477403 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
RPL39-203ENST00000477403 CARD14Q9BXL6 1004 aa7.58□□□□□ -1.2
RPL39-203ENST00000477403 HMX1Q9NP08 348 aaPredicted RBP7.58□□□□□ -1.2
RPL39-203ENST00000477403 FKBPLQ9UIM3 349 aa7.58□□□□□ -1.2
RPL39-203ENST00000477403 TMEM259Q4ZIN3 620 aa7.57□□□□□ -1.2
RPL39-203ENST00000477403 EPS8L1Q8TE68 723 aa7.57□□□□□ -1.2
RPL39-203ENST00000477403 POTECB2RU33 542 aa7.56□□□□□ -1.2
RPL39-203ENST00000477403 SH3BP5LQ7L8J4 393 aa7.56□□□□□ -1.2
RPL39-203ENST00000477403 SH3RF1Q7Z6J0 888 aa7.56□□□□□ -1.2
RPL39-203ENST00000477403 GPKOWQ92917 476 aaPredicted RBP eCLIP7.56□□□□□ -1.2
RPL39-203ENST00000477403 NNTQ13423 1086 aa7.55□□□□□ -1.2
RPL39-203ENST00000477403 MPNDQ8N594 471 aa7.55□□□□□ -1.2
RPL39-203ENST00000477403 ADH1CP00326 375 aa7.54□□□□□ -1.2
RPL39-203ENST00000477403 PDXDC2PQ6P474 469 aa7.54□□□□□ -1.2
RPL39-203ENST00000477403 CDK15Q96Q40 435 aa7.54□□□□□ -1.2
RPL39-203ENST00000477403 ARHGAP9Q9BRR9 750 aa7.54□□□□□ -1.2
RPL39-203ENST00000477403 GMPR2Q9P2T1 348 aaKnown RBP7.54□□□□□ -1.2
RPL39-203ENST00000477403 ZC3H4Q9UPT8 1303 aaKnown RBP7.53□□□□□ -1.2
RPL39-203ENST00000477403 CAPN5O15484 640 aaPredicted RBP7.53□□□□□ -1.2
RPL39-203ENST00000477403 ZBTB33Q86T24 672 aa7.53□□□□□ -1.2
RPL39-203ENST00000477403 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
RPL39-203ENST00000477403 C1QTNF2Q9BXJ5 285 aa7.53□□□□□ -1.2
RPL39-203ENST00000477403 ATP13A2Q9NQ11 1180 aa7.53□□□□□ -1.2
RPL39-203ENST00000477403 ERFEQ4G0M1 354 aa7.52□□□□□ -1.21
RPL39-203ENST00000477403 VASH1Q7L8A9 365 aaPredicted RBP7.52□□□□□ -1.21
RPL39-203ENST00000477403 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
RPL39-203ENST00000477403 PTK2Q05397 1052 aa7.51□□□□□ -1.21
RPL39-203ENST00000477403 TRMT44Q8IYL2 757 aaKnown RBP7.51□□□□□ -1.21
RPL39-203ENST00000477403 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
RPL39-203ENST00000477403 MYO15BQ96JP2 1530 aa7.51□□□□□ -1.21
RPL39-203ENST00000477403 C11orf95C9JLR9 678 aaPredicted RBP7.5□□□□□ -1.21
RPL39-203ENST00000477403 BMP1P13497 986 aa7.5□□□□□ -1.21
RPL39-203ENST00000477403 FSHRP23945 695 aa7.5□□□□□ -1.21
RPL39-203ENST00000477403 GRM5P41594 1212 aa7.5□□□□□ -1.21
RPL39-203ENST00000477403 NR5A1Q13285 461 aa7.5□□□□□ -1.21
RPL39-203ENST00000477403 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
RPL39-203ENST00000477403 NR3C2P08235 984 aa7.49□□□□□ -1.21
RPL39-203ENST00000477403 TIMP2P16035 220 aa7.49□□□□□ -1.21
RPL39-203ENST00000477403 MAP4K5Q9Y4K4 846 aa7.49□□□□□ -1.21
RPL39-203ENST00000477403 ZIC2O95409 532 aaPredicted RBP7.48□□□□□ -1.21
RPL39-203ENST00000477403 BANK1Q8NDB2 785 aa7.48□□□□□ -1.21
RPL39-203ENST00000477403 ADAM32Q8TC27 787 aa7.48□□□□□ -1.21
RPL39-203ENST00000477403 GJD4Q96KN9 370 aaPredicted RBP7.48□□□□□ -1.21
RPL39-203ENST00000477403 OCSTAMPQ9BR26 566 aa7.48□□□□□ -1.21
RPL39-203ENST00000477403 GPSM3Q9Y4H4 160 aa7.48□□□□□ -1.21
RPL39-203ENST00000477403 TRIM46Q7Z4K8 759 aa7.47□□□□□ -1.21
RPL39-203ENST00000477403 ITPKCQ96DU7 683 aa7.47□□□□□ -1.21
RPL39-203ENST00000477403 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms