RNA–Protein interactions for RNA: ENST00000477215.5

SYCP1-205, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-205ENST00000477215 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
SYCP1-205ENST00000477215 FDX1P10109 184 aa9.71□□□□□ -0.86
SYCP1-205ENST00000477215 NDUFV2P19404 249 aa9.71□□□□□ -0.86
SYCP1-205ENST00000477215 MRPL14Q6P1L8 145 aaKnown RBP9.71□□□□□ -0.86
SYCP1-205ENST00000477215 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
SYCP1-205ENST00000477215 MS4A1P11836 297 aa9.7□□□□□ -0.86
SYCP1-205ENST00000477215 PURBQ96QR8 312 aaKnown RBP9.7□□□□□ -0.86
SYCP1-205ENST00000477215 MOXD2PA6NHM9 499 aa9.69□□□□□ -0.86
SYCP1-205ENST00000477215 SOBPA7XYQ1 873 aa9.69□□□□□ -0.86
SYCP1-205ENST00000477215 JUNDP17535 347 aa9.67□□□□□ -0.86
SYCP1-205ENST00000477215 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
SYCP1-205ENST00000477215 NUDT12Q9BQG2 462 aa9.66□□□□□ -0.86
SYCP1-205ENST00000477215 PCDHGC3Q9UN70 934 aa9.66□□□□□ -0.86
SYCP1-205ENST00000477215 SH3BP2P78314 561 aa9.65□□□□□ -0.86
SYCP1-205ENST00000477215 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
SYCP1-205ENST00000477215 PLEKHG3A1L390 1219 aa9.64□□□□□ -0.87
SYCP1-205ENST00000477215 NNTQ13423 1086 aa9.64□□□□□ -0.87
SYCP1-205ENST00000477215 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
SYCP1-205ENST00000477215 RETREG3Q86VR2 466 aa9.64□□□□□ -0.87
SYCP1-205ENST00000477215 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
SYCP1-205ENST00000477215 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
SYCP1-205ENST00000477215 MAN1A2O60476 641 aa9.63□□□□□ -0.87
SYCP1-205ENST00000477215 CSPP1Q1MSJ5 1256 aa9.63□□□□□ -0.87
SYCP1-205ENST00000477215 WDR4P57081 412 aaKnown RBP9.62□□□□□ -0.87
SYCP1-205ENST00000477215 MTMR2Q13614 643 aa9.62□□□□□ -0.87
SYCP1-205ENST00000477215 GPAT2Q6NUI2 795 aa9.62□□□□□ -0.87
SYCP1-205ENST00000477215 PPFIA3O75145 1194 aa9.61□□□□□ -0.87
SYCP1-205ENST00000477215 ADH1CP00326 375 aa9.61□□□□□ -0.87
SYCP1-205ENST00000477215 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
SYCP1-205ENST00000477215 IGHA1P01876 353 aa9.6□□□□□ -0.87
SYCP1-205ENST00000477215 TIMP2P16035 220 aa9.6□□□□□ -0.87
SYCP1-205ENST00000477215 RIC3Q7Z5B4 369 aa9.59□□□□□ -0.87
SYCP1-205ENST00000477215 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
SYCP1-205ENST00000477215 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
SYCP1-205ENST00000477215 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
SYCP1-205ENST00000477215 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
SYCP1-205ENST00000477215 PCDHB15Q9Y5E8 787 aa9.58□□□□□ -0.88
SYCP1-205ENST00000477215 LINC01559Q495D7 138 aa9.57□□□□□ -0.88
SYCP1-205ENST00000477215 XP32Q5T750 250 aa9.57□□□□□ -0.88
SYCP1-205ENST00000477215 TSC1Q92574 1164 aa9.57□□□□□ -0.88
SYCP1-205ENST00000477215 CNTNAP3BQ96NU0 1288 aa9.57□□□□□ -0.88
SYCP1-205ENST00000477215 CNTNAP3Q9BZ76 1288 aa9.57□□□□□ -0.88
SYCP1-205ENST00000477215 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
SYCP1-205ENST00000477215 VARSP26640 1264 aaKnown RBP9.56□□□□□ -0.88
SYCP1-205ENST00000477215 C6orf118Q5T5N4 469 aa9.56□□□□□ -0.88
SYCP1-205ENST00000477215 MPNDQ8N594 471 aa9.56□□□□□ -0.88
SYCP1-205ENST00000477215 ZBTB3Q9H5J0 574 aa9.56□□□□□ -0.88
SYCP1-205ENST00000477215 SPDYE5A6NIY4 337 aa9.55□□□□□ -0.88
SYCP1-205ENST00000477215 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
SYCP1-205ENST00000477215 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
SYCP1-205ENST00000477215 SPTLC1O15269 473 aa9.55□□□□□ -0.88
SYCP1-205ENST00000477215 NUTM2DQ5VT03 806 aaPredicted RBP9.55□□□□□ -0.88
SYCP1-205ENST00000477215 MYSM1Q5VVJ2 828 aa9.55□□□□□ -0.88
SYCP1-205ENST00000477215 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
SYCP1-205ENST00000477215 CABLES1Q8TDN4 633 aa9.55□□□□□ -0.88
SYCP1-205ENST00000477215 HRCP23327 699 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 IRS1P35568 1242 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 FOXK2Q01167 660 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 BAP1Q92560 729 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 UNC93B1Q9H1C4 597 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 KDM4CQ9H3R0 1056 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 LIMD1Q9UGP4 676 aa9.54□□□□□ -0.88
SYCP1-205ENST00000477215 GJA5P36382 358 aa9.53□□□□□ -0.88
SYCP1-205ENST00000477215 KRT76Q01546 638 aa9.53□□□□□ -0.88
SYCP1-205ENST00000477215 SVOPQ8N4V2 548 aa9.53□□□□□ -0.88
SYCP1-205ENST00000477215 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
SYCP1-205ENST00000477215 PTPRNQ16849 979 aa9.52□□□□□ -0.89
SYCP1-205ENST00000477215 KLF16Q9BXK1 252 aaPredicted RBP9.52□□□□□ -0.89
SYCP1-205ENST00000477215 RSPH6AQ9H0K4 717 aa9.52□□□□□ -0.89
SYCP1-205ENST00000477215 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
SYCP1-205ENST00000477215 UPP2O95045 317 aa9.51□□□□□ -0.89
SYCP1-205ENST00000477215 CTHP32929 405 aa9.51□□□□□ -0.89
SYCP1-205ENST00000477215 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
SYCP1-205ENST00000477215 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
SYCP1-205ENST00000477215 ZIC2O95409 532 aaPredicted RBP9.5□□□□□ -0.89
SYCP1-205ENST00000477215 BMP2P12643 396 aa9.5□□□□□ -0.89
SYCP1-205ENST00000477215 QPCTQ16769 361 aa9.5□□□□□ -0.89
SYCP1-205ENST00000477215 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
SYCP1-205ENST00000477215 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
SYCP1-205ENST00000477215 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
SYCP1-205ENST00000477215 KANK3Q6NY19 840 aa9.49□□□□□ -0.89
SYCP1-205ENST00000477215 FAM117AQ9C073 453 aa9.49□□□□□ -0.89
SYCP1-205ENST00000477215 ZFAND3Q9H8U3 227 aa9.49□□□□□ -0.89
SYCP1-205ENST00000477215 MARSP56192 900 aaKnown RBP9.48□□□□□ -0.89
SYCP1-205ENST00000477215 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
SYCP1-205ENST00000477215 FAM174AQ8TBP5 190 aa9.48□□□□□ -0.89
SYCP1-205ENST00000477215 EVA1BQ9NVM1 165 aa9.48□□□□□ -0.89
SYCP1-205ENST00000477215 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
SYCP1-205ENST00000477215 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
SYCP1-205ENST00000477215 DDRGK1Q96HY6 314 aa9.47□□□□□ -0.89
SYCP1-205ENST00000477215 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
SYCP1-205ENST00000477215 ARID5BQ14865 1188 aa9.46□□□□□ -0.9
SYCP1-205ENST00000477215 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
SYCP1-205ENST00000477215 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
SYCP1-205ENST00000477215 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
SYCP1-205ENST00000477215 DNMT3LQ9UJW3 386 aa9.46□□□□□ -0.9
SYCP1-205ENST00000477215 LYPD8Q6UX82 237 aa9.45□□□□□ -0.9
SYCP1-205ENST00000477215 HELBQ8NG08 1087 aaPredicted RBP9.45□□□□□ -0.9
SYCP1-205ENST00000477215 LILRB3O75022 631 aa9.44□□□□□ -0.9
SYCP1-205ENST00000477215 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms