RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 TTC21BQ7Z4L5 1316 aa8.75□□□□□ -1.01
CCDC30-209ENST00000477155 GOLGA2Q08379 1002 aa8.75□□□□□ -1.01
CCDC30-209ENST00000477155 RUNDC1Q96C34 613 aa8.75□□□□□ -1.01
CCDC30-209ENST00000477155 NPHP4O75161 1426 aaPredicted RBP8.74□□□□□ -1.01
CCDC30-209ENST00000477155 PTCH1Q13635 1447 aa8.74□□□□□ -1.01
CCDC30-209ENST00000477155 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
CCDC30-209ENST00000477155 RCAN3Q9UKA8 241 aa8.74□□□□□ -1.01
CCDC30-209ENST00000477155 NUTM2GQ5VZR2 741 aa8.74□□□□□ -1.01
CCDC30-209ENST00000477155 SPINK5Q9NQ38 1064 aaPredicted RBP8.74□□□□□ -1.01
CCDC30-209ENST00000477155 PIK3R4Q99570 1358 aa8.74□□□□□ -1.01
CCDC30-209ENST00000477155 DMRT2Q9Y5R5 561 aa8.74□□□□□ -1.01
CCDC30-209ENST00000477155 PAK3O75914 559 aaPredicted RBP8.73□□□□□ -1.01
CCDC30-209ENST00000477155 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
CCDC30-209ENST00000477155 DIP2AQ14689 1571 aa8.73□□□□□ -1.01
CCDC30-209ENST00000477155 PROSER2Q86WR7 435 aaPredicted RBP8.73□□□□□ -1.01
CCDC30-209ENST00000477155 CDC42BPGQ6DT37 1551 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 KDM4FA0A1W2PPD8 638 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 ESCO1Q5FWF5 840 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 NKTRP30414 1462 aaKnown RBP8.72□□□□□ -1.01
CCDC30-209ENST00000477155 ZNF521Q96K83 1311 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 HMOX1P09601 288 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 DUSP27Q5VZP5 1158 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 WWC1Q8IX03 1113 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 ZNF142P52746 1687 aaPredicted RBP8.72□□□□□ -1.01
CCDC30-209ENST00000477155 PLIN1O60240 522 aa8.72□□□□□ -1.01
CCDC30-209ENST00000477155 SLFN5Q08AF3 891 aa8.71□□□□□ -1.01
CCDC30-209ENST00000477155 USP6P35125 1406 aa8.71□□□□□ -1.02
CCDC30-209ENST00000477155 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.02
CCDC30-209ENST00000477155 XRN1Q8IZH2 1706 aaKnown RBP8.71□□□□□ -1.02
CCDC30-209ENST00000477155 NLRP6P59044 892 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 ADGRB2O60241 1585 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 SHPRHQ149N8 1683 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 KIF20BQ96Q89 1820 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 PHF8Q9UPP1 1060 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 XPCQ01831 940 aaPredicted RBP8.7□□□□□ -1.02
CCDC30-209ENST00000477155 ORAI2Q96SN7 254 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 MAPK8IP3Q9UPT6 1336 aa8.7□□□□□ -1.02
CCDC30-209ENST00000477155 MAP2P11137 1827 aaKnown RBP8.7□□□□□ -1.02
CCDC30-209ENST00000477155 ABTB2Q8N961 1025 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 CHD2O14647 1828 aaKnown RBP8.69□□□□□ -1.02
CCDC30-209ENST00000477155 RRP1P56182 461 aaKnown RBP8.69□□□□□ -1.02
CCDC30-209ENST00000477155 PSME1Q06323 249 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 PLEKHF1Q96S99 279 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 FOXO3O43524 673 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 HSP90AB2PQ58FF8 381 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 ITSN1Q15811 1721 aa8.69□□□□□ -1.02
CCDC30-209ENST00000477155 E9PSI1 815 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 RNF123Q5XPI4 1314 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 ANKRD26Q9UPS8 1709 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 IL13P35225 146 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 TMPOP42166 694 aaKnown RBP8.68□□□□□ -1.02
CCDC30-209ENST00000477155 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 PPP4R2Q9NY27 417 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 RIPK4P57078 832 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 COL3A1P02461 1466 aaPredicted RBP8.68□□□□□ -1.02
CCDC30-209ENST00000477155 MON2Q7Z3U7 1717 aa8.68□□□□□ -1.02
CCDC30-209ENST00000477155 AKAP12Q02952 1782 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 NEFMP07197 916 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 NGEFQ8N5V2 710 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 PHACTR3Q96KR7 559 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 FCHSD2O94868 740 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 AATKQ6ZMQ8 1374 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 TTC21AQ8NDW8 1320 aa8.67□□□□□ -1.02
CCDC30-209ENST00000477155 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
CCDC30-209ENST00000477155 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 AMPHP49418 695 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 SSH2Q76I76 1423 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 ANKARQ7Z5J8 1434 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 ADGRL3Q9HAR2 1447 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 MAP3K19Q56UN5 1328 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
CCDC30-209ENST00000477155 EXOC6Q8TAG9 804 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 PNNQ9H307 717 aaKnown RBP8.66□□□□□ -1.02
CCDC30-209ENST00000477155 C19orf44Q9H6X5 657 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 TOPAZ1Q8N9V7 1692 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 ERICH6BQ5W0A0 696 aa8.66□□□□□ -1.02
CCDC30-209ENST00000477155 PELP1Q8IZL8 1130 aaKnown RBP8.66□□□□□ -1.02
CCDC30-209ENST00000477155 BCAR3O75815 825 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 SULT6B1Q6IMI4 303 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 AEBP1Q8IUX7 1158 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 TRIM35Q9UPQ4 493 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 NALCNQ8IZF0 1738 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 OVOS2A0A0J9YW53 1432 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 OVOS2Q6IE36 1432 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 C20orf194Q5TEA3 1177 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 WDR63Q8IWG1 891 aa8.65□□□□□ -1.02
CCDC30-209ENST00000477155 PHF23Q9BUL5 403 aaPredicted RBP8.65□□□□□ -1.02
CCDC30-209ENST00000477155 ATF3P18847 181 aa8.65□□□□□ -1.03
CCDC30-209ENST00000477155 TSR2Q969E8 191 aaKnown RBP8.65□□□□□ -1.03
CCDC30-209ENST00000477155 LTV1Q96GA3 475 aaPredicted RBP8.65□□□□□ -1.03
CCDC30-209ENST00000477155 LAS1LQ9Y4W2 734 aaKnown RBP8.65□□□□□ -1.03
CCDC30-209ENST00000477155 TMEM94Q12767 1356 aa8.64□□□□□ -1.03
CCDC30-209ENST00000477155 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
CCDC30-209ENST00000477155 DDX17Q92841 729 aaKnown RBP8.64□□□□□ -1.03
CCDC30-209ENST00000477155 CCDC136Q96JN2 1154 aa8.64□□□□□ -1.03
CCDC30-209ENST00000477155 THUMPD2Q9BTF0 503 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms