RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
NUP188-205ENST00000477069 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
NUP188-205ENST00000477069 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
NUP188-205ENST00000477069 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
NUP188-205ENST00000477069 ROBO2Q9HCK4 1378 aa15.02■□□□□ -0
NUP188-205ENST00000477069 U2AF1L5P0DN76 240 aaPredicted RBP15.02□□□□□ -0.01
NUP188-205ENST00000477069 U2AF1Q01081 240 aaKnown RBP eCLIP15.02□□□□□ -0.012e-6■□□□□ 9.8
NUP188-205ENST00000477069 KDM2BQ8NHM5 1336 aa15.02□□□□□ -0.01
NUP188-205ENST00000477069 LTKP29376 864 aa15.01□□□□□ -0.01
NUP188-205ENST00000477069 LRRC7Q96NW7 1537 aa15.01□□□□□ -0.01
NUP188-205ENST00000477069 BCAR3O75815 825 aa15□□□□□ -0.01
NUP188-205ENST00000477069 MSH5O43196 834 aa15□□□□□ -0.01
NUP188-205ENST00000477069 PTPRUQ92729 1446 aa15□□□□□ -0.01
NUP188-205ENST00000477069 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
NUP188-205ENST00000477069 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
NUP188-205ENST00000477069 PRR36Q9H6K5 1346 aa14.98□□□□□ -0.01
NUP188-205ENST00000477069 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
NUP188-205ENST00000477069 CDK12Q9NYV4 1490 aaPredicted RBP14.98□□□□□ -0.01
NUP188-205ENST00000477069 CEBPAP49715 358 aaPredicted RBP14.98□□□□□ -0.01
NUP188-205ENST00000477069 NALCNQ8IZF0 1738 aa14.98□□□□□ -0.01
NUP188-205ENST00000477069 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
NUP188-205ENST00000477069 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
NUP188-205ENST00000477069 AATKQ6ZMQ8 1374 aa14.97□□□□□ -0.01
NUP188-205ENST00000477069 RIMS1Q86UR5 1692 aaKnown RBP14.97□□□□□ -0.01
NUP188-205ENST00000477069 POLKQ9UBT6 870 aa14.97□□□□□ -0.01
NUP188-205ENST00000477069 DIAPH1O60610 1272 aaKnown RBP14.96□□□□□ -0.01
NUP188-205ENST00000477069 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.96□□□□□ -0.01
NUP188-205ENST00000477069 CCDC61Q9Y6R9 512 aa14.96□□□□□ -0.01
NUP188-205ENST00000477069 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
NUP188-205ENST00000477069 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
NUP188-205ENST00000477069 PDE3AQ14432 1141 aa14.95□□□□□ -0.02
NUP188-205ENST00000477069 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
NUP188-205ENST00000477069 PTCH1Q13635 1447 aa14.95□□□□□ -0.02
NUP188-205ENST00000477069 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
NUP188-205ENST00000477069 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
NUP188-205ENST00000477069 MS4A1P11836 297 aa14.94□□□□□ -0.02
NUP188-205ENST00000477069 NME9Q86XW9 330 aa14.94□□□□□ -0.02
NUP188-205ENST00000477069 CENPQQ7L2Z9 268 aaPredicted RBP14.93□□□□□ -0.02
NUP188-205ENST00000477069 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
NUP188-205ENST00000477069 FBLN1P23142 703 aa14.92□□□□□ -0.02
NUP188-205ENST00000477069 ANP32EQ9BTT0 268 aa14.92□□□□□ -0.02
NUP188-205ENST00000477069 RSPH6AQ9H0K4 717 aa14.92□□□□□ -0.02
NUP188-205ENST00000477069 CEP170BQ9Y4F5 1589 aaPredicted RBP14.92□□□□□ -0.02
NUP188-205ENST00000477069 IL16Q14005 1332 aa14.92□□□□□ -0.02
NUP188-205ENST00000477069 RGPD8O14715 1765 aaPredicted RBP14.91□□□□□ -0.02
NUP188-205ENST00000477069 FCHSD2O94868 740 aa14.91□□□□□ -0.02
NUP188-205ENST00000477069 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
NUP188-205ENST00000477069 MAPK8IP3Q9UPT6 1336 aa14.91□□□□□ -0.02
NUP188-205ENST00000477069 DLG5Q8TDM6 1919 aa14.91□□□□□ -0.02
NUP188-205ENST00000477069 ZNF142P52746 1687 aaPredicted RBP14.9□□□□□ -0.02
NUP188-205ENST00000477069 ZNF692Q9BU19 519 aaPredicted RBP14.9□□□□□ -0.02
NUP188-205ENST00000477069 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
NUP188-205ENST00000477069 OVOS2A0A0J9YW53 1432 aa14.9□□□□□ -0.02
NUP188-205ENST00000477069 OVOS2Q6IE36 1432 aa14.9□□□□□ -0.02
NUP188-205ENST00000477069 TBX22Q9Y458 520 aa14.9□□□□□ -0.02
NUP188-205ENST00000477069 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
NUP188-205ENST00000477069 SSH2Q76I76 1423 aa14.9□□□□□ -0.02
NUP188-205ENST00000477069 CT47B1P0C2W7 299 aaPredicted RBP14.89□□□□□ -0.03
NUP188-205ENST00000477069 IL13P35225 146 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 PEAK1Q9H792 1746 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 PLEKHG3A1L390 1219 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 USP6P35125 1406 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
NUP188-205ENST00000477069 SLC26A8Q96RN1 970 aa14.88□□□□□ -0.03
NUP188-205ENST00000477069 BACH2Q9BYV9 841 aa14.88□□□□□ -0.03
NUP188-205ENST00000477069 PDE4AP27815 886 aa14.87□□□□□ -0.03
NUP188-205ENST00000477069 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
NUP188-205ENST00000477069 COG3Q96JB2 828 aa14.87□□□□□ -0.03
NUP188-205ENST00000477069 FMN2Q9NZ56 1722 aa14.87□□□□□ -0.03
NUP188-205ENST00000477069 RIPK4P57078 832 aa14.87□□□□□ -0.03
NUP188-205ENST00000477069 TSR2Q969E8 191 aaKnown RBP14.87□□□□□ -0.03
NUP188-205ENST00000477069 VIRMAQ69YN4 1812 aaKnown RBP14.86□□□□□ -0.03
NUP188-205ENST00000477069 ACEP12821 1306 aa14.86□□□□□ -0.03
NUP188-205ENST00000477069 TTC21BQ7Z4L5 1316 aa14.86□□□□□ -0.03
NUP188-205ENST00000477069 THEMISQ8N1K5 641 aaPredicted RBP14.86□□□□□ -0.03
NUP188-205ENST00000477069 AMOTL2Q9Y2J4 779 aa14.86□□□□□ -0.03
NUP188-205ENST00000477069 USP54Q70EL1 1684 aa14.86□□□□□ -0.03
NUP188-205ENST00000477069 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
NUP188-205ENST00000477069 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
NUP188-205ENST00000477069 ADAMTSL3P82987 1691 aa14.85□□□□□ -0.03
NUP188-205ENST00000477069 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
NUP188-205ENST00000477069 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
NUP188-205ENST00000477069 RLBP1P12271 317 aa14.85□□□□□ -0.03
NUP188-205ENST00000477069 TNNQ9UQP3 1299 aa14.85□□□□□ -0.03
NUP188-205ENST00000477069 COG6Q9Y2V7 657 aa14.85□□□□□ -0.03
NUP188-205ENST00000477069 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
NUP188-205ENST00000477069 CHD2O14647 1828 aaKnown RBP14.84□□□□□ -0.03
NUP188-205ENST00000477069 CANXP27824 592 aaKnown RBP14.84□□□□□ -0.03
NUP188-205ENST00000477069 CLUAP1Q96AJ1 413 aa14.84□□□□□ -0.03
NUP188-205ENST00000477069 PIK3C2AO00443 1686 aa14.84□□□□□ -0.03
NUP188-205ENST00000477069 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
NUP188-205ENST00000477069 AAMPQ13685 434 aa14.84□□□□□ -0.03
NUP188-205ENST00000477069 FRAT1Q92837 279 aaPredicted RBP14.83□□□□□ -0.03
NUP188-205ENST00000477069 PHACTR3Q96KR7 559 aa14.83□□□□□ -0.03
NUP188-205ENST00000477069 PIK3R4Q99570 1358 aa14.83□□□□□ -0.04
NUP188-205ENST00000477069 IGHDP01880 384 aa14.83□□□□□ -0.04
NUP188-205ENST00000477069 RRS1Q15050 365 aaKnown RBP14.83□□□□□ -0.04
NUP188-205ENST00000477069 BCL2L13Q9BXK5 485 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms