RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 NOP2P46087 812 aaKnown RBP8.46□□□□□ -1.06
SPATA9-204ENST00000477047 SASS6Q6UVJ0 657 aa8.46□□□□□ -1.06
SPATA9-204ENST00000477047 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
SPATA9-204ENST00000477047 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
SPATA9-204ENST00000477047 IPO8O15397 1037 aaKnown RBP8.45□□□□□ -1.06
SPATA9-204ENST00000477047 RGS20O76081 388 aa8.45□□□□□ -1.06
SPATA9-204ENST00000477047 GTF2F1P35269 517 aaKnown RBP eCLIP8.45□□□□□ -1.06
SPATA9-204ENST00000477047 MTA3Q9BTC8 594 aa8.45□□□□□ -1.06
SPATA9-204ENST00000477047 IBTKQ9P2D0 1353 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 RNF123Q5XPI4 1314 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 CCDC189A1A4V9 331 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 GOLGA6CA6NDK9 693 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 FRAT2O75474 233 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 GOLGA6DP0CG33 693 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 POLD1P28340 1107 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 TNNT3P45378 269 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 GOLGA2Q08379 1002 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 C3orf67Q6ZVT6 689 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 ZNF771Q7L3S4 317 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 ERCC4Q92889 916 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 NUCKS1Q9H1E3 243 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 GOLGA6AQ9NYA3 693 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 STK26Q9P289 416 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 SMC3Q9UQE7 1217 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 SCAPERQ9BY12 1400 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 ANKRD33BA6NCL7 494 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 HSPA5P11021 654 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 PDE4AP27815 886 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 PDAP1Q13442 181 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 RGL3Q3MIN7 710 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 LRCH2Q5VUJ6 765 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
SPATA9-204ENST00000477047 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 LSM14AQ8ND56 463 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 LARP6Q9BRS8 491 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 TACO1Q9BSH4 297 aaKnown RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 TEX13AQ9BXU3 409 aaPredicted RBP8.44□□□□□ -1.06
SPATA9-204ENST00000477047 CCDC173Q0VFZ6 552 aa8.43□□□□□ -1.06
SPATA9-204ENST00000477047 MKRN3Q13064 507 aaKnown RBP8.43□□□□□ -1.06
SPATA9-204ENST00000477047 CXorf38Q8TB03 319 aa8.43□□□□□ -1.06
SPATA9-204ENST00000477047 TBC1D22AQ8WUA7 517 aa8.43□□□□□ -1.06
SPATA9-204ENST00000477047 CHMP4CQ96CF2 233 aa8.43□□□□□ -1.06
SPATA9-204ENST00000477047 CALR3Q96L12 384 aaKnown RBP8.43□□□□□ -1.06
SPATA9-204ENST00000477047 PPP1R9BQ96SB3 815 aa8.43□□□□□ -1.06
SPATA9-204ENST00000477047 MSNP26038 577 aaKnown RBP8.42□□□□□ -1.06
SPATA9-204ENST00000477047 HMGN5P82970 282 aaKnown RBP8.42□□□□□ -1.06
SPATA9-204ENST00000477047 BECN1Q14457 450 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 HSP90B2PQ58FF3 399 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 C1QTNF12Q5T7M4 302 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 ZNF687Q8N1G0 1237 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 PDCL2Q8N4E4 241 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 ZNF428Q96B54 188 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 PRIMPOLQ96LW4 560 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 SYNPO2Q9UMS6 1093 aa8.42□□□□□ -1.06
SPATA9-204ENST00000477047 SYNRGQ9UMZ2 1314 aa8.41□□□□□ -1.06
SPATA9-204ENST00000477047 DHX16O60231 1041 aaKnown RBP8.41□□□□□ -1.06
SPATA9-204ENST00000477047 GSCP56915 257 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-204ENST00000477047 EP400NLQ6ZTU2 488 aa8.41□□□□□ -1.06
SPATA9-204ENST00000477047 CCDC91Q7Z6B0 441 aa8.41□□□□□ -1.06
SPATA9-204ENST00000477047 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
SPATA9-204ENST00000477047 CCDC97Q96F63 343 aaPredicted RBP8.41□□□□□ -1.06
SPATA9-204ENST00000477047 EIF3JO75822 258 aaKnown RBP8.4□□□□□ -1.06
SPATA9-204ENST00000477047 TPM3P06753 285 aa8.4□□□□□ -1.06
SPATA9-204ENST00000477047 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
SPATA9-204ENST00000477047 GOLGA6L1Q8N7Z2 621 aa8.4□□□□□ -1.06
SPATA9-204ENST00000477047 HCSTQ9UBK5 93 aa8.4□□□□□ -1.06
SPATA9-204ENST00000477047 ABCF2Q9UG63 623 aa8.4□□□□□ -1.06
SPATA9-204ENST00000477047 SETSIPP0DME0 302 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 HOXB3P14651 431 aaPredicted RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 PEX19P40855 299 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 SARNPP82979 210 aaKnown RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 KCNH8Q96L42 1107 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 HIRIP3Q9BW71 556 aaPredicted RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 KDM4CQ9H3R0 1056 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 WDR70Q9NW82 654 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 OGFRQ9NZT2 677 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 POGKQ9P215 609 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 RPS6KL1Q9Y6S9 549 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 ANKRD18BA2A2Z9 1011 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 GOLGA6L6A8MZA4 724 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 GOLGA6L22H0YM25 854 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 NOL8Q76FK4 1167 aaKnown RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 MYRIPQ8NFW9 859 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 RANBP17Q9H2T7 1088 aaKnown RBP8.39□□□□□ -1.07
SPATA9-204ENST00000477047 GRPEL1Q9HAV7 217 aa8.39□□□□□ -1.07
SPATA9-204ENST00000477047 SMARCA2P51531 1590 aa8.38□□□□□ -1.07
SPATA9-204ENST00000477047 PAX7P23759 505 aa8.38□□□□□ -1.07
SPATA9-204ENST00000477047 SSFA2P28290 1259 aa8.38□□□□□ -1.07
SPATA9-204ENST00000477047 GORABQ5T7V8 394 aa8.38□□□□□ -1.07
SPATA9-204ENST00000477047 ZNF280DQ6N043 979 aa8.38□□□□□ -1.07
SPATA9-204ENST00000477047 KRBA2Q6ZNG9 492 aa8.38□□□□□ -1.07
SPATA9-204ENST00000477047 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms